RNA–Protein interactions for RNA: ENST00000553555.5

APEX1-205, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 1 (best)

Gene APEX1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-205ENST00000553555 MS4A14Q96JA4 679 aa14.39□□□□□ -0.11
APEX1-205ENST00000553555 SEPT5Q99719 369 aaPredicted RBP14.39□□□□□ -0.11
APEX1-205ENST00000553555 C17orf80Q9BSJ5 609 aa14.39□□□□□ -0.11
APEX1-205ENST00000553555 C11orf84Q9BUA3 381 aaPredicted RBP14.39□□□□□ -0.11
APEX1-205ENST00000553555 IL37Q9NZH6 218 aa14.39□□□□□ -0.11
APEX1-205ENST00000553555 HSFX1Q9UBD0 423 aa14.39□□□□□ -0.11
APEX1-205ENST00000553555 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.39□□□□□ -0.11
APEX1-205ENST00000553555 COL4A4P53420 1690 aaPredicted RBP14.39□□□□□ -0.11
APEX1-205ENST00000553555 MYO7AQ13402 2215 aa14.39□□□□□ -0.11
APEX1-205ENST00000553555 C5orf67F2Z3F1 127 aa14.38□□□□□ -0.11
APEX1-205ENST00000553555 PDE2AO00408 941 aaPredicted RBP14.38□□□□□ -0.11
APEX1-205ENST00000553555 CEP104O60308 925 aa14.38□□□□□ -0.11
APEX1-205ENST00000553555 ARHGEF15O94989 841 aa14.38□□□□□ -0.11
APEX1-205ENST00000553555 SEC24AO95486 1093 aa14.38□□□□□ -0.11
APEX1-205ENST00000553555 CXCL14O95715 111 aa14.38□□□□□ -0.11
APEX1-205ENST00000553555 LTFP02788 710 aa14.38□□□□□ -0.11
APEX1-205ENST00000553555 RB1P06400 928 aa14.38□□□□□ -0.11
APEX1-205ENST00000553555 ATF2P15336 505 aa14.38□□□□□ -0.11
APEX1-205ENST00000553555 MIPP30301 263 aa14.38□□□□□ -0.11
APEX1-205ENST00000553555 HADHQ16836 314 aaKnown RBP14.38□□□□□ -0.11
APEX1-205ENST00000553555 RASGEF1CQ8N431 466 aa14.38□□□□□ -0.11
APEX1-205ENST00000553555 SPPL3Q8TCT6 385 aa14.38□□□□□ -0.11
APEX1-205ENST00000553555 NT5C3BQ969T7 300 aa14.38□□□□□ -0.11
APEX1-205ENST00000553555 GDF15Q99988 308 aa14.38□□□□□ -0.11
APEX1-205ENST00000553555 NCAPGQ9BPX3 1015 aa14.38□□□□□ -0.11
APEX1-205ENST00000553555 ALG13Q9NP73 1137 aaKnown RBP14.38□□□□□ -0.11
APEX1-205ENST00000553555 EHD2Q9NZN4 543 aa14.38□□□□□ -0.11
APEX1-205ENST00000553555 PCDHA11Q9Y5I1 949 aa14.38□□□□□ -0.11
APEX1-205ENST00000553555 TEX28O15482 410 aa14.37□□□□□ -0.11
APEX1-205ENST00000553555 RTN3O95197 1032 aaPredicted RBP14.37□□□□□ -0.11
APEX1-205ENST00000553555 PYGMP11217 842 aa14.37□□□□□ -0.11
APEX1-205ENST00000553555 DESP17661 470 aa14.37□□□□□ -0.11
APEX1-205ENST00000553555 TFE3P19532 575 aaPredicted RBP14.37□□□□□ -0.11
APEX1-205ENST00000553555 PAFAH1B1P43034 410 aa14.37□□□□□ -0.11
APEX1-205ENST00000553555 ERVFC1P60507 584 aa14.37□□□□□ -0.11
APEX1-205ENST00000553555 ATP11AP98196 1134 aa14.37□□□□□ -0.11
APEX1-205ENST00000553555 SLC25A11Q02978 314 aaKnown RBP14.37□□□□□ -0.11
APEX1-205ENST00000553555 UBE3AQ05086 875 aa14.37□□□□□ -0.11
APEX1-205ENST00000553555 CKAP4Q07065 602 aaKnown RBP14.37□□□□□ -0.11
APEX1-205ENST00000553555 IFRD2Q12894 506 aaPredicted RBP14.37□□□□□ -0.11
APEX1-205ENST00000553555 CDO1Q16878 200 aa14.37□□□□□ -0.11
APEX1-205ENST00000553555 SLC25A52Q3SY17 297 aa14.37□□□□□ -0.11
APEX1-205ENST00000553555 ATP13A4Q4VNC1 1196 aa14.37□□□□□ -0.11
APEX1-205ENST00000553555 RAB6CQ53S08 254 aa14.37□□□□□ -0.11
APEX1-205ENST00000553555 DCAF6Q58WW2 860 aa14.37□□□□□ -0.11
APEX1-205ENST00000553555 SYPL2Q5VXT5 272 aa14.37□□□□□ -0.11
APEX1-205ENST00000553555 DENND5BQ6ZUT9 1274 aa14.37□□□□□ -0.11
APEX1-205ENST00000553555 TMC7Q7Z402 723 aa14.37□□□□□ -0.11
APEX1-205ENST00000553555 SPRED2Q7Z698 418 aa14.37□□□□□ -0.11
APEX1-205ENST00000553555 KATNAL2Q8IYT4 538 aa14.37□□□□□ -0.11
APEX1-205ENST00000553555 ACTRT1Q8TDG2 376 aa14.37□□□□□ -0.11
APEX1-205ENST00000553555 GPR152Q8TDT2 470 aa14.37□□□□□ -0.11
APEX1-205ENST00000553555 FAM172AQ8WUF8 416 aa14.37□□□□□ -0.11
APEX1-205ENST00000553555 CEP295NLQ96MC4 621 aa14.37□□□□□ -0.11
APEX1-205ENST00000553555 NPY6RQ99463 290 aa14.37□□□□□ -0.11
APEX1-205ENST00000553555 UBE2OQ9C0C9 1292 aaKnown RBP14.37□□□□□ -0.11
APEX1-205ENST00000553555 RAB6CQ9H0N0 254 aa14.37□□□□□ -0.11
APEX1-205ENST00000553555 FBXO44Q9H4M3 255 aa14.37□□□□□ -0.11
APEX1-205ENST00000553555 COMMD8Q9NX08 183 aa14.37□□□□□ -0.11
APEX1-205ENST00000553555 NAALADL1Q9UQQ1 740 aa14.37□□□□□ -0.11
APEX1-205ENST00000553555 SCML2Q9UQR0 700 aa14.37□□□□□ -0.11
APEX1-205ENST00000553555 IRAK3Q9Y616 596 aa14.37□□□□□ -0.11
APEX1-205ENST00000553555 FAM92AA1XBS5 289 aa14.37□□□□□ -0.11
APEX1-205ENST00000553555 CAPN9O14815 690 aa14.37□□□□□ -0.11
APEX1-205ENST00000553555 ENDOD1O94919 500 aa14.37□□□□□ -0.11
APEX1-205ENST00000553555 TRUB2O95900 331 aaKnown RBP14.37□□□□□ -0.11
APEX1-205ENST00000553555 CA3P07451 260 aa14.37□□□□□ -0.11
APEX1-205ENST00000553555 CNPP09543 421 aaKnown RBP14.37□□□□□ -0.11
APEX1-205ENST00000553555 DNAJB1P25685 340 aa14.37□□□□□ -0.11
APEX1-205ENST00000553555 IL1R2P27930 398 aa14.37□□□□□ -0.11
APEX1-205ENST00000553555 USP46P62068 366 aa14.37□□□□□ -0.11
APEX1-205ENST00000553555 ZNF211Q13398 564 aaPredicted RBP14.37□□□□□ -0.11
APEX1-205ENST00000553555 CCDC181Q5TID7 509 aa14.37□□□□□ -0.11
APEX1-205ENST00000553555 BSPRYQ5W0U4 402 aa14.37□□□□□ -0.11
APEX1-205ENST00000553555 TXNRD3NBQ6F5E7 133 aa14.37□□□□□ -0.11
APEX1-205ENST00000553555 BEND5Q7L4P6 421 aa14.37□□□□□ -0.11
APEX1-205ENST00000553555 STRADAQ7RTN6 431 aa14.37□□□□□ -0.11
APEX1-205ENST00000553555 BNIPLQ7Z465 357 aa14.37□□□□□ -0.11
APEX1-205ENST00000553555 POLNQ7Z5Q5 900 aa14.37□□□□□ -0.11
APEX1-205ENST00000553555 STKLD1Q8NE28 680 aa14.37□□□□□ -0.11
APEX1-205ENST00000553555 POF1BQ8WVV4 589 aa14.37□□□□□ -0.11
APEX1-205ENST00000553555 GOLGA1Q92805 767 aa14.37□□□□□ -0.11
APEX1-205ENST00000553555 SAMD11Q96NU1 681 aa14.37□□□□□ -0.11
APEX1-205ENST00000553555 TBCBQ99426 244 aa14.37□□□□□ -0.11
APEX1-205ENST00000553555 ADAM33Q9BZ11 813 aa14.37□□□□□ -0.11
APEX1-205ENST00000553555 NGRNQ9NPE2 291 aaKnown RBP14.37□□□□□ -0.11
APEX1-205ENST00000553555 SMARCAL1Q9NZC9 954 aa14.37□□□□□ -0.11
APEX1-205ENST00000553555 PCSK1NQ9UHG2 260 aa14.37□□□□□ -0.11
APEX1-205ENST00000553555 TTC7AQ9ULT0 858 aaPredicted RBP14.37□□□□□ -0.11
APEX1-205ENST00000553555 MAFFQ9ULX9 164 aa14.37□□□□□ -0.11
APEX1-205ENST00000553555 USP18Q9UMW8 372 aa14.37□□□□□ -0.11
APEX1-205ENST00000553555 SLC38A8A6NNN8 435 aa14.36□□□□□ -0.11
APEX1-205ENST00000553555 KRT7P08729 469 aa14.36□□□□□ -0.11
APEX1-205ENST00000553555 ATF6P18850 670 aa14.36□□□□□ -0.11
APEX1-205ENST00000553555 YWHAQP27348 245 aa14.36□□□□□ -0.11
APEX1-205ENST00000553555 CA8P35219 290 aa14.36□□□□□ -0.11
APEX1-205ENST00000553555 SULT1E1P49888 294 aa14.36□□□□□ -0.11
APEX1-205ENST00000553555 HDAC4P56524 1084 aa14.36□□□□□ -0.11
APEX1-205ENST00000553555 YWHAGP61981 247 aaKnown RBP eCLIP14.36□□□□□ -0.11
APEX1-205ENST00000553555 AADACL2Q6P093 401 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms