RNA–Protein interactions for RNA: ENST00000553065.1

DDX23-217, Transcript of DEAD-box helicase 23, humanhuman

TSL 2

Gene DDX23, Length 336 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX23-217ENST00000553065 FBXO43Q4G163 708 aa11.17□□□□□ -0.62
DDX23-217ENST00000553065 CBWD6Q4V339 395 aa11.17□□□□□ -0.62
DDX23-217ENST00000553065 C2orf27AQ580R0 203 aa11.17□□□□□ -0.62
DDX23-217ENST00000553065 CBWD3Q5JTY5 395 aa11.17□□□□□ -0.62
DDX23-217ENST00000553065 CBWD5Q5RIA9 395 aa11.17□□□□□ -0.62
DDX23-217ENST00000553065 PPP1R26Q5T8A7 1209 aaPredicted RBP11.17□□□□□ -0.62
DDX23-217ENST00000553065 ANKRD40Q6AI12 368 aa11.17□□□□□ -0.62
DDX23-217ENST00000553065 RASSF3Q86WH2 238 aa11.17□□□□□ -0.62
DDX23-217ENST00000553065 MIB1Q86YT6 1006 aa11.17□□□□□ -0.62
DDX23-217ENST00000553065 FAM186BQ8IYM0 893 aa11.17□□□□□ -0.62
DDX23-217ENST00000553065 CCDC33Q8N5R6 958 aa11.17□□□□□ -0.62
DDX23-217ENST00000553065 GPR161Q8N6U8 529 aaKnown RBP11.17□□□□□ -0.62
DDX23-217ENST00000553065 IL17RCQ8NAC3 791 aa11.17□□□□□ -0.62
DDX23-217ENST00000553065 SLC4A11Q8NBS3 891 aa11.17□□□□□ -0.62
DDX23-217ENST00000553065 SMARCD1Q96GM5 515 aa11.17□□□□□ -0.62
DDX23-217ENST00000553065 SLITRK1Q96PX8 696 aa11.17□□□□□ -0.62
DDX23-217ENST00000553065 ARID3AQ99856 593 aa11.17□□□□□ -0.62
DDX23-217ENST00000553065 DUSP9Q99956 384 aaKnown RBP11.17□□□□□ -0.62
DDX23-217ENST00000553065 CD248Q9HCU0 757 aa11.17□□□□□ -0.62
DDX23-217ENST00000553065 KRT82Q9NSB4 513 aa11.17□□□□□ -0.62
DDX23-217ENST00000553065 USP18Q9UMW8 372 aa11.17□□□□□ -0.62
DDX23-217ENST00000553065 SLC8A2Q9UPR5 921 aa11.17□□□□□ -0.62
DDX23-217ENST00000553065 FRMD4BQ9Y2L6 1034 aa11.17□□□□□ -0.62
DDX23-217ENST00000553065 PCDHA5Q9Y5H7 936 aa11.17□□□□□ -0.62
DDX23-217ENST00000553065 USP3Q9Y6I4 520 aa11.17□□□□□ -0.62
DDX23-217ENST00000553065 SGK1O00141 431 aa11.16□□□□□ -0.62
DDX23-217ENST00000553065 MDM4O15151 490 aa11.16□□□□□ -0.62
DDX23-217ENST00000553065 LRP3O75074 770 aa11.16□□□□□ -0.62
DDX23-217ENST00000553065 RPP40O75818 363 aaKnown RBP11.16□□□□□ -0.62
DDX23-217ENST00000553065 GABBR2O75899 941 aa11.16□□□□□ -0.62
DDX23-217ENST00000553065 NFATC1O95644 943 aa11.16□□□□□ -0.62
DDX23-217ENST00000553065 KLKB1P03952 638 aa11.16□□□□□ -0.62
DDX23-217ENST00000553065 TUBP50607 506 aa11.16□□□□□ -0.62
DDX23-217ENST00000553065 RAD23BP54727 409 aa11.16□□□□□ -0.62
DDX23-217ENST00000553065 SEC13P55735 322 aa11.16□□□□□ -0.62
DDX23-217ENST00000553065 NR1H3Q13133 447 aa11.16□□□□□ -0.62
DDX23-217ENST00000553065 EDRF1Q3B7T1 1238 aa11.16□□□□□ -0.62
DDX23-217ENST00000553065 PRR23CQ6ZRP0 262 aa11.16□□□□□ -0.62
DDX23-217ENST00000553065 HTR3DQ70Z44 454 aa11.16□□□□□ -0.62
DDX23-217ENST00000553065 INTS8Q75QN2 995 aaKnown RBP11.16□□□□□ -0.62
DDX23-217ENST00000553065 NAT16Q8N8M0 369 aa11.16□□□□□ -0.62
DDX23-217ENST00000553065 OLIG1Q8TAK6 271 aa11.16□□□□□ -0.62
DDX23-217ENST00000553065 PNKPQ96T60 521 aa11.16□□□□□ -0.62
DDX23-217ENST00000553065 MMRN2Q9H8L6 949 aa11.16□□□□□ -0.62
DDX23-217ENST00000553065 CYP3A43Q9HB55 503 aa11.16□□□□□ -0.62
DDX23-217ENST00000553065 TMEM8AQ9HCN3 771 aa11.16□□□□□ -0.62
DDX23-217ENST00000553065 CYLDQ9NQC7 956 aa11.16□□□□□ -0.62
DDX23-217ENST00000553065 EHD2Q9NZN4 543 aa11.16□□□□□ -0.62
DDX23-217ENST00000553065 GMEB2Q9UKD1 530 aa11.16□□□□□ -0.62
DDX23-217ENST00000553065 SCML2Q9UQR0 700 aa11.16□□□□□ -0.62
DDX23-217ENST00000553065 COQ4Q9Y3A0 265 aa11.16□□□□□ -0.62
DDX23-217ENST00000553065 SPAG17Q6Q759 2223 aa11.15□□□□□ -0.62
DDX23-217ENST00000553065 RALGAPA1Q6GYQ0 2036 aa11.15□□□□□ -0.62
DDX23-217ENST00000553065 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.15□□□□□ -0.62
DDX23-217ENST00000553065 A0A1W2PQH9 124 aa11.15□□□□□ -0.62
DDX23-217ENST00000553065 TRIM49BA6NDI0 452 aa11.15□□□□□ -0.62
DDX23-217ENST00000553065 PRR5-ARHGAP8B1AHC4 643 aa11.15□□□□□ -0.62
DDX23-217ENST00000553065 TULP2O00295 520 aa11.15□□□□□ -0.62
DDX23-217ENST00000553065 SLC30A4O14863 429 aa11.15□□□□□ -0.62
DDX23-217ENST00000553065 CYP26A1O43174 497 aa11.15□□□□□ -0.62
DDX23-217ENST00000553065 TLR5O60602 858 aa11.15□□□□□ -0.62
DDX23-217ENST00000553065 EPN2O95208 641 aa11.15□□□□□ -0.62
DDX23-217ENST00000553065 KAT7O95251 611 aa11.15□□□□□ -0.62
DDX23-217ENST00000553065 CISD3P0C7P0 127 aa11.15□□□□□ -0.62
DDX23-217ENST00000553065 ZNF806P0C7X5 589 aa11.15□□□□□ -0.62
DDX23-217ENST00000553065 CD58P19256 250 aa11.15□□□□□ -0.62
DDX23-217ENST00000553065 BCKDHBP21953 392 aa11.15□□□□□ -0.62
DDX23-217ENST00000553065 GTF2H1P32780 548 aa11.15□□□□□ -0.62
DDX23-217ENST00000553065 PIK3CAP42336 1068 aa11.15□□□□□ -0.62
DDX23-217ENST00000553065 PDE6CP51160 858 aa11.15□□□□□ -0.62
DDX23-217ENST00000553065 ARHGAP8P85298 464 aa11.15□□□□□ -0.62
DDX23-217ENST00000553065 CRY1Q16526 586 aa11.15□□□□□ -0.62
DDX23-217ENST00000553065 ZNF394Q53GI3 561 aa11.15□□□□□ -0.62
DDX23-217ENST00000553065 COBLL1Q53SF7 1204 aa11.15□□□□□ -0.62
DDX23-217ENST00000553065 KRT39Q6A163 491 aa11.15□□□□□ -0.62
DDX23-217ENST00000553065 BHLHA9Q7RTU4 235 aa11.15□□□□□ -0.62
DDX23-217ENST00000553065 CACNA2D4Q7Z3S7 1137 aa11.15□□□□□ -0.62
DDX23-217ENST00000553065 ALLCQ8N6M5 410 aa11.15□□□□□ -0.62
DDX23-217ENST00000553065 UBR7Q8N806 425 aa11.15□□□□□ -0.62
DDX23-217ENST00000553065 PDZD8Q8NEN9 1154 aa11.15□□□□□ -0.62
DDX23-217ENST00000553065 NDRG1Q92597 394 aaKnown RBP11.15□□□□□ -0.62
DDX23-217ENST00000553065 ZSWIM1Q9BR11 485 aa11.15□□□□□ -0.62
DDX23-217ENST00000553065 NT5C1AQ9BXI3 368 aa11.15□□□□□ -0.62
DDX23-217ENST00000553065 DUSP16Q9BY84 665 aa11.15□□□□□ -0.62
DDX23-217ENST00000553065 NIF3L1Q9GZT8 377 aa11.15□□□□□ -0.62
DDX23-217ENST00000553065 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.15□□□□□ -0.62
DDX23-217ENST00000553065 RAB20Q9NX57 234 aa11.15□□□□□ -0.62
DDX23-217ENST00000553065 MMP17Q9ULZ9 603 aa11.15□□□□□ -0.62
DDX23-217ENST00000553065 GON4LQ3T8J9 2241 aa11.15□□□□□ -0.63
DDX23-217ENST00000553065 CNOT1A5YKK6 2376 aaKnown RBP11.14□□□□□ -0.63
DDX23-217ENST00000553065 RNF225M0QZC1 329 aaPredicted RBP11.14□□□□□ -0.63
DDX23-217ENST00000553065 HOXC11O43248 304 aaPredicted RBP11.14□□□□□ -0.63
DDX23-217ENST00000553065 GADD45BO75293 160 aaPredicted RBP11.14□□□□□ -0.63
DDX23-217ENST00000553065 TULP3O75386 442 aa11.14□□□□□ -0.63
DDX23-217ENST00000553065 APBB3O95704 486 aa11.14□□□□□ -0.63
DDX23-217ENST00000553065 ACO1P21399 889 aaKnown RBP11.14□□□□□ -0.63
DDX23-217ENST00000553065 TIE1P35590 1138 aa11.14□□□□□ -0.63
DDX23-217ENST00000553065 EIF2DP41214 584 aaKnown RBP11.14□□□□□ -0.63
DDX23-217ENST00000553065 MRPS21P82921 87 aaKnown RBP11.14□□□□□ -0.63
DDX23-217ENST00000553065 LMNB2Q03252 620 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms