RNA–Protein interactions for RNA: ENST00000552440.5

USP44-208, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 5 BASIC

Gene USP44, Length 1,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-208ENST00000552440 ARHGAP15Q53QZ3 475 aa4.53□□□□□ -1.68
USP44-208ENST00000552440 BMP2KLQ5H9B9 411 aa4.53□□□□□ -1.68
USP44-208ENST00000552440 C3orf38Q5JPI3 329 aa4.53□□□□□ -1.68
USP44-208ENST00000552440 ATG16L1Q676U5 607 aa4.53□□□□□ -1.68
USP44-208ENST00000552440 KIAA1841Q6NSI8 718 aa4.53□□□□□ -1.68
USP44-208ENST00000552440 KLHDC10Q6PID8 442 aa4.53□□□□□ -1.68
USP44-208ENST00000552440 KANSL1Q7Z3B3 1105 aa4.53□□□□□ -1.68
USP44-208ENST00000552440 CCDC117Q8IWD4 279 aaPredicted RBP4.53□□□□□ -1.68
USP44-208ENST00000552440 GRK7Q8WTQ7 553 aa4.53□□□□□ -1.68
USP44-208ENST00000552440 SYAP1Q96A49 352 aaPredicted RBP4.53□□□□□ -1.68
USP44-208ENST00000552440 SNX22Q96L94 193 aa4.53□□□□□ -1.68
USP44-208ENST00000552440 TNMDQ9H2S6 317 aa4.53□□□□□ -1.68
USP44-208ENST00000552440 NDST4Q9H3R1 872 aa4.53□□□□□ -1.68
USP44-208ENST00000552440 BCAS3Q9H6U6 928 aa4.53□□□□□ -1.68
USP44-208ENST00000552440 PSAT1Q9Y617 370 aa4.53□□□□□ -1.68
USP44-208ENST00000552440 ST20-MTHFSA0A0A6YYL1 179 aa4.52□□□□□ -1.69
USP44-208ENST00000552440 A0A0B4J203 849 aa4.52□□□□□ -1.69
USP44-208ENST00000552440 KRT87PA6NCN2 255 aa4.52□□□□□ -1.69
USP44-208ENST00000552440 PTGES3LE9PB15 166 aa4.52□□□□□ -1.69
USP44-208ENST00000552440 TAF4O00268 1085 aa4.52□□□□□ -1.69
USP44-208ENST00000552440 SGTAO43765 313 aa4.52□□□□□ -1.69
USP44-208ENST00000552440 ZBTB14O43829 449 aa4.52□□□□□ -1.69
USP44-208ENST00000552440 KIF1CO43896 1103 aaKnown RBP4.52□□□□□ -1.69
USP44-208ENST00000552440 PPFIA2O75334 1257 aa4.52□□□□□ -1.69
USP44-208ENST00000552440 KIAA0754O94854 1291 aa4.52□□□□□ -1.69
USP44-208ENST00000552440 CLEC3BP05452 202 aa4.52□□□□□ -1.69
USP44-208ENST00000552440 TBXAS1P24557 533 aaPredicted RBP4.52□□□□□ -1.69
USP44-208ENST00000552440 EEF1DP29692 281 aaKnown RBP4.52□□□□□ -1.69
USP44-208ENST00000552440 TLX1P31314 330 aaPredicted RBP4.52□□□□□ -1.69
USP44-208ENST00000552440 GDF5P43026 501 aa4.52□□□□□ -1.69
USP44-208ENST00000552440 RPS16P62249 146 aaKnown RBP4.52□□□□□ -1.69
USP44-208ENST00000552440 ACTN3Q08043 901 aaPredicted RBP4.52□□□□□ -1.69
USP44-208ENST00000552440 MALLQ13021 153 aa4.52□□□□□ -1.69
USP44-208ENST00000552440 COASYQ13057 564 aa4.52□□□□□ -1.69
USP44-208ENST00000552440 BAK1Q16611 211 aa4.52□□□□□ -1.69
USP44-208ENST00000552440 C2orf76Q3KRA6 126 aa4.52□□□□□ -1.69
USP44-208ENST00000552440 SLC2A7Q6PXP3 512 aa4.52□□□□□ -1.69
USP44-208ENST00000552440 KLHL24Q6TFL4 600 aa4.52□□□□□ -1.69
USP44-208ENST00000552440 FIP1L1Q6UN15 594 aaKnown RBP4.52□□□□□ -1.69
USP44-208ENST00000552440 DENND5BQ6ZUT9 1274 aa4.52□□□□□ -1.69
USP44-208ENST00000552440 MIGA2Q7L4E1 593 aa4.52□□□□□ -1.69
USP44-208ENST00000552440 GATAD2AQ86YP4 633 aa4.52□□□□□ -1.69
USP44-208ENST00000552440 TRIM48Q8IWZ4 208 aa4.52□□□□□ -1.69
USP44-208ENST00000552440 DIS3L2Q8IYB7 885 aaKnown RBP4.52□□□□□ -1.69
USP44-208ENST00000552440 GLIS1Q8NBF1 620 aa4.52□□□□□ -1.69
USP44-208ENST00000552440 ZBTB44Q8NCP5 570 aa4.52□□□□□ -1.69
USP44-208ENST00000552440 OR1N1Q8NGS0 311 aa4.52□□□□□ -1.69
USP44-208ENST00000552440 ETNPPLQ8TBG4 499 aa4.52□□□□□ -1.69
USP44-208ENST00000552440 DEPDC1BQ8WUY9 529 aa4.52□□□□□ -1.69
USP44-208ENST00000552440 ZFAND2BQ8WV99 257 aa4.52□□□□□ -1.69
USP44-208ENST00000552440 MAML1Q92585 1016 aa4.52□□□□□ -1.69
USP44-208ENST00000552440 ZNF75CPQ92670 426 aaPredicted RBP4.52□□□□□ -1.69
USP44-208ENST00000552440 CUL5Q93034 780 aa4.52□□□□□ -1.69
USP44-208ENST00000552440 SDCCAG3Q96C92 435 aa4.52□□□□□ -1.69
USP44-208ENST00000552440 VPS39Q96JC1 886 aa4.52□□□□□ -1.69
USP44-208ENST00000552440 PPP1R13BQ96KQ4 1090 aa4.52□□□□□ -1.69
USP44-208ENST00000552440 AK8Q96MA6 479 aa4.52□□□□□ -1.69
USP44-208ENST00000552440 GSDMAQ96QA5 445 aa4.52□□□□□ -1.69
USP44-208ENST00000552440 TWSG1Q9GZX9 223 aa4.52□□□□□ -1.69
USP44-208ENST00000552440 ZCWPW1Q9H0M4 648 aa4.52□□□□□ -1.69
USP44-208ENST00000552440 PDCL3Q9H2J4 239 aa4.52□□□□□ -1.69
USP44-208ENST00000552440 PABPC3Q9H361 631 aaKnown RBP4.52□□□□□ -1.69
USP44-208ENST00000552440 TAF1DQ9H5J8 278 aaPredicted RBP4.52□□□□□ -1.69
USP44-208ENST00000552440 COPS7BQ9H9Q2 264 aaPredicted RBP4.52□□□□□ -1.69
USP44-208ENST00000552440 SACM1LQ9NTJ5 587 aa4.52□□□□□ -1.69
USP44-208ENST00000552440 LMBRD1Q9NUN5 540 aa4.52□□□□□ -1.69
USP44-208ENST00000552440 COQ3Q9NZJ6 369 aa4.52□□□□□ -1.69
USP44-208ENST00000552440 RAI14Q9P0K7 980 aa4.52□□□□□ -1.69
USP44-208ENST00000552440 BTBD7Q9P203 1132 aa4.52□□□□□ -1.69
USP44-208ENST00000552440 C5AR2Q9P296 337 aa4.52□□□□□ -1.69
USP44-208ENST00000552440 TBC1D14Q9P2M4 693 aa4.52□□□□□ -1.69
USP44-208ENST00000552440 PI4KBQ9UBF8 816 aa4.52□□□□□ -1.69
USP44-208ENST00000552440 PRSS50Q9UI38 385 aa4.52□□□□□ -1.69
USP44-208ENST00000552440 PCDHB4Q9Y5E5 795 aa4.52□□□□□ -1.69
USP44-208ENST00000552440 PCDHB1Q9Y5F3 818 aa4.52□□□□□ -1.69
USP44-208ENST00000552440 AP1M2Q9Y6Q5 423 aa4.52□□□□□ -1.69
USP44-208ENST00000552440 FAM169AQ9Y6X4 670 aa4.52□□□□□ -1.69
USP44-208ENST00000552440 A0A0U1RQK1 487 aa4.51□□□□□ -1.69
USP44-208ENST00000552440 TCRBV5S2A0A599 114 aa4.51□□□□□ -1.69
USP44-208ENST00000552440 ARHGAP10A1A4S6 786 aa4.51□□□□□ -1.69
USP44-208ENST00000552440 ZNF320A2RRD8 509 aa4.51□□□□□ -1.69
USP44-208ENST00000552440 CASQ2O14958 399 aaPredicted RBP4.51□□□□□ -1.69
USP44-208ENST00000552440 ASAP2O43150 1006 aa4.51□□□□□ -1.69
USP44-208ENST00000552440 LAMTOR5O43504 91 aa4.51□□□□□ -1.69
USP44-208ENST00000552440 PRPSAP2O60256 369 aa4.51□□□□□ -1.69
USP44-208ENST00000552440 ACTL6BO94805 426 aa4.51□□□□□ -1.69
USP44-208ENST00000552440 RPLP2P05387 115 aaKnown RBP4.51□□□□□ -1.69
USP44-208ENST00000552440 TMIGD3P0DMS9 266 aaPredicted RBP4.51□□□□□ -1.69
USP44-208ENST00000552440 CYP2A6P11509 494 aaPredicted RBP4.51□□□□□ -1.69
USP44-208ENST00000552440 C6P13671 934 aa4.51□□□□□ -1.69
USP44-208ENST00000552440 TNNT1P13805 278 aa4.51□□□□□ -1.69
USP44-208ENST00000552440 PSMA4P25789 261 aaKnown RBP4.51□□□□□ -1.69
USP44-208ENST00000552440 PBLDP30039 288 aaPredicted RBP4.51□□□□□ -1.69
USP44-208ENST00000552440 AKT1P31749 480 aa4.51□□□□□ -1.69
USP44-208ENST00000552440 EIF2DP41214 584 aaKnown RBP4.51□□□□□ -1.69
USP44-208ENST00000552440 YBEYP58557 167 aaPredicted RBP4.51□□□□□ -1.69
USP44-208ENST00000552440 SLC6A3Q01959 620 aa4.51□□□□□ -1.69
USP44-208ENST00000552440 ZBTB16Q05516 673 aa4.51□□□□□ -1.69
USP44-208ENST00000552440 DDR1Q08345 913 aa4.51□□□□□ -1.69
USP44-208ENST00000552440 DMTNQ08495 405 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms