RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 NACA2Q9H009 215 aa15.07■□□□□ 0
CHMP1A-210ENST00000551981 CALCOCO1Q9P1Z2 691 aa15.07■□□□□ 0
CHMP1A-210ENST00000551981 LHX6Q9UPM6 363 aa15.07■□□□□ 0
CHMP1A-210ENST00000551981 FREM2Q5SZK8 3169 aa15.06■□□□□ 0
CHMP1A-210ENST00000551981 PCDH15Q96QU1 1955 aa15.06■□□□□ 0
CHMP1A-210ENST00000551981 COCHO43405 550 aa15.06■□□□□ 0
CHMP1A-210ENST00000551981 ZNF217O75362 1048 aa15.06■□□□□ 0
CHMP1A-210ENST00000551981 SYPP08247 313 aa15.06■□□□□ 0
CHMP1A-210ENST00000551981 HOXB2P14652 356 aa15.06■□□□□ 0
CHMP1A-210ENST00000551981 GABRG2P18507 467 aa15.06■□□□□ 0
CHMP1A-210ENST00000551981 NTSR1P30989 418 aa15.06■□□□□ 0
CHMP1A-210ENST00000551981 TUBP50607 506 aa15.06■□□□□ 0
CHMP1A-210ENST00000551981 ZNF33AQ06730 810 aa15.06■□□□□ 0
CHMP1A-210ENST00000551981 TRPC3Q13507 836 aa15.06■□□□□ 0
CHMP1A-210ENST00000551981 ACAP1Q15027 740 aa15.06■□□□□ 0
CHMP1A-210ENST00000551981 ZNF423Q2M1K9 1284 aa15.06■□□□□ 0
CHMP1A-210ENST00000551981 ANO4Q32M45 955 aa15.06■□□□□ 0
CHMP1A-210ENST00000551981 LRSAM1Q6UWE0 723 aa15.06■□□□□ 0
CHMP1A-210ENST00000551981 MINDY1Q8N5J2 469 aa15.06■□□□□ 0
CHMP1A-210ENST00000551981 TERB1Q8NA31 727 aa15.06■□□□□ 0
CHMP1A-210ENST00000551981 CGRRF1Q99675 332 aa15.06■□□□□ 0
CHMP1A-210ENST00000551981 DUSP9Q99956 384 aaKnown RBP15.06■□□□□ 0
CHMP1A-210ENST00000551981 B3GNT5Q9BYG0 378 aa15.06■□□□□ 0
CHMP1A-210ENST00000551981 DPEP3Q9H4B8 488 aa15.06■□□□□ 0
CHMP1A-210ENST00000551981 UPF2Q9HAU5 1272 aaKnown RBP15.06■□□□□ 0
CHMP1A-210ENST00000551981 CAPN10Q9HC96 672 aa15.06■□□□□ 0
CHMP1A-210ENST00000551981 SPHK2Q9NRA0 654 aa15.06■□□□□ 0
CHMP1A-210ENST00000551981 TMEM30AQ9NV96 361 aa15.06■□□□□ 0
CHMP1A-210ENST00000551981 CLDN5O00501 218 aa15.05■□□□□ -0
CHMP1A-210ENST00000551981 ARHGAP33O14559 1287 aa15.05■□□□□ -0
CHMP1A-210ENST00000551981 EIF3DO15371 548 aaKnown RBP eCLIP15.05■□□□□ -0
CHMP1A-210ENST00000551981 STAU1O95793 577 aaKnown RBP15.05■□□□□ -0
CHMP1A-210ENST00000551981 CST3P01034 146 aaPredicted RBP15.05■□□□□ -0
CHMP1A-210ENST00000551981 HOXB3P14651 431 aaPredicted RBP15.05■□□□□ -0
CHMP1A-210ENST00000551981 CEBPZQ03701 1054 aaKnown RBP15.05■□□□□ -0
CHMP1A-210ENST00000551981 RING1Q06587 406 aa15.05■□□□□ -0
CHMP1A-210ENST00000551981 PSMD6Q15008 389 aa15.05■□□□□ -0
CHMP1A-210ENST00000551981 SNX30Q5VWJ9 437 aa15.05■□□□□ -0
CHMP1A-210ENST00000551981 GRAMD4Q6IC98 578 aa15.05■□□□□ -0
CHMP1A-210ENST00000551981 BBS7Q8IWZ6 715 aa15.05■□□□□ -0
CHMP1A-210ENST00000551981 DEFB119Q8N690 84 aa15.05■□□□□ -0
CHMP1A-210ENST00000551981 CCDC127Q96BQ5 260 aa15.05■□□□□ -0
CHMP1A-210ENST00000551981 ZFRQ96KR1 1074 aaKnown RBP15.05■□□□□ -0
CHMP1A-210ENST00000551981 MED10Q9BTT4 135 aa15.05■□□□□ -0
CHMP1A-210ENST00000551981 TNMDQ9H2S6 317 aa15.05■□□□□ -0
CHMP1A-210ENST00000551981 FSCN3Q9NQT6 498 aa15.05■□□□□ -0
CHMP1A-210ENST00000551981 NXF1Q9UBU9 619 aaKnown RBP15.05■□□□□ -0
CHMP1A-210ENST00000551981 CHORDC1Q9UHD1 332 aaPredicted RBP15.05■□□□□ -0
CHMP1A-210ENST00000551981 STARD13Q9Y3M8 1113 aa15.05■□□□□ -0
CHMP1A-210ENST00000551981 NME7Q9Y5B8 376 aa15.05■□□□□ -0
CHMP1A-210ENST00000551981 A0A1W2PQD8 194 aa15.04■□□□□ -0
CHMP1A-210ENST00000551981 FAM221BA6H8Z2 402 aa15.04■□□□□ -0
CHMP1A-210ENST00000551981 CLSTN1O94985 981 aa15.04■□□□□ -0
CHMP1A-210ENST00000551981 ATICP31939 592 aa15.04■□□□□ -0
CHMP1A-210ENST00000551981 SLC14A1Q13336 389 aa15.04■□□□□ -0
CHMP1A-210ENST00000551981 CHPFQ8IZ52 775 aa15.04■□□□□ -0
CHMP1A-210ENST00000551981 PDILTQ8N807 584 aa15.04■□□□□ -0
CHMP1A-210ENST00000551981 RDH13Q8NBN7 331 aa15.04■□□□□ -0
CHMP1A-210ENST00000551981 GLIS3Q8NEA6 775 aa15.04■□□□□ -0
CHMP1A-210ENST00000551981 SYAP1Q96A49 352 aaPredicted RBP15.04■□□□□ -0
CHMP1A-210ENST00000551981 FAM124BQ9H5Z6 455 aaPredicted RBP15.04■□□□□ -0
CHMP1A-210ENST00000551981 CCSER2Q9H7U1 834 aa15.04■□□□□ -0
CHMP1A-210ENST00000551981 DMAP1Q9NPF5 467 aaPredicted RBP15.04■□□□□ -0
CHMP1A-210ENST00000551981 AGPAT3Q9NRZ7 376 aa15.04■□□□□ -0
CHMP1A-210ENST00000551981 DNAJC17Q9NVM6 304 aaKnown RBP15.04■□□□□ -0
CHMP1A-210ENST00000551981 DNAAF2Q9NVR5 837 aaKnown RBP15.04■□□□□ -0
CHMP1A-210ENST00000551981 COMMD8Q9NX08 183 aa15.04■□□□□ -0
CHMP1A-210ENST00000551981 SUSD2Q9UGT4 822 aa15.04■□□□□ -0
CHMP1A-210ENST00000551981 CYP8B1Q9UNU6 501 aa15.04■□□□□ -0
CHMP1A-210ENST00000551981 MORC2Q9Y6X9 1032 aaPredicted RBP15.04■□□□□ -0
CHMP1A-210ENST00000551981 A0A087X0B3 334 aa15.03■□□□□ -0
CHMP1A-210ENST00000551981 IGHV1OR15-9A0A0B4J2B8 117 aa15.03■□□□□ -0
CHMP1A-210ENST00000551981 A0A1W2PQF6 199 aa15.03■□□□□ -0
CHMP1A-210ENST00000551981 PHACTR2O75167 634 aa15.03■□□□□ -0
CHMP1A-210ENST00000551981 NDUFS2O75306 463 aa15.03■□□□□ -0
CHMP1A-210ENST00000551981 IRF1P10914 325 aa15.03■□□□□ -0
CHMP1A-210ENST00000551981 WASP42768 502 aa15.03■□□□□ -0
CHMP1A-210ENST00000551981 CYP2J2P51589 502 aa15.03■□□□□ -0
CHMP1A-210ENST00000551981 SLC5A3P53794 718 aa15.03■□□□□ -0
CHMP1A-210ENST00000551981 MYL6P60660 151 aa15.03■□□□□ -0
CHMP1A-210ENST00000551981 SNRPFP62306 86 aaKnown RBP15.03■□□□□ -0
CHMP1A-210ENST00000551981 CYP24A1Q07973 514 aa15.03■□□□□ -0
CHMP1A-210ENST00000551981 SYCP2LQ5T4T6 812 aa15.03■□□□□ -0
CHMP1A-210ENST00000551981 FAM35AQ86V20 835 aa15.03■□□□□ -0
CHMP1A-210ENST00000551981 TMEM25Q86YD3 366 aa15.03■□□□□ -0
CHMP1A-210ENST00000551981 CHCHD4Q8N4Q1 142 aa15.03■□□□□ -0
CHMP1A-210ENST00000551981 TRIML1Q8N9V2 468 aa15.03■□□□□ -0
CHMP1A-210ENST00000551981 XXYLT1Q8NBI6 393 aa15.03■□□□□ -0
CHMP1A-210ENST00000551981 SCAMP5Q8TAC9 235 aa15.03■□□□□ -0
CHMP1A-210ENST00000551981 SCFD1Q8WVM8 642 aa15.03■□□□□ -0
CHMP1A-210ENST00000551981 HPS3Q969F9 1004 aa15.03■□□□□ -0
CHMP1A-210ENST00000551981 SMARCD1Q96GM5 515 aa15.03■□□□□ -0
CHMP1A-210ENST00000551981 TNIP3Q96KP6 325 aa15.03■□□□□ -0
CHMP1A-210ENST00000551981 HSPA12BQ96MM6 686 aa15.03■□□□□ -0
CHMP1A-210ENST00000551981 XPO6Q96QU8 1125 aaKnown RBP15.03■□□□□ -0
CHMP1A-210ENST00000551981 KCNK16Q96T55 309 aa15.03■□□□□ -0
CHMP1A-210ENST00000551981 GMIPQ9P107 970 aa15.03■□□□□ -0
CHMP1A-210ENST00000551981 PCDHB9Q9Y5E1 797 aa15.03■□□□□ -0
CHMP1A-210ENST00000551981 MYH10P35580 1976 aa15.02■□□□□ -0
CHMP1A-210ENST00000551981 UBE4BO95155 1302 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms