RNA–Protein interactions for RNA: ENST00000551352.1

SMARCD1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 2

Gene SMARCD1, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-210ENST00000551352 PDCL3Q9H2J4 239 aa7.81□□□□□ -1.16
SMARCD1-210ENST00000551352 CYP3A43Q9HB55 503 aa7.81□□□□□ -1.16
SMARCD1-210ENST00000551352 ABCB6Q9NP58 842 aa7.81□□□□□ -1.16
SMARCD1-210ENST00000551352 AVENQ9NQS1 362 aaPredicted RBP7.81□□□□□ -1.16
SMARCD1-210ENST00000551352 DPP3Q9NY33 737 aa7.81□□□□□ -1.16
SMARCD1-210ENST00000551352 CNTN3Q9P232 1028 aa7.81□□□□□ -1.16
SMARCD1-210ENST00000551352 CTTNBP2NLQ9P2B4 639 aa7.81□□□□□ -1.16
SMARCD1-210ENST00000551352 MTRRQ9UBK8 725 aa7.81□□□□□ -1.16
SMARCD1-210ENST00000551352 RNF14Q9UBS8 474 aa7.81□□□□□ -1.16
SMARCD1-210ENST00000551352 NXF1Q9UBU9 619 aaKnown RBP7.81□□□□□ -1.16
SMARCD1-210ENST00000551352 AMFRQ9UKV5 643 aa7.81□□□□□ -1.16
SMARCD1-210ENST00000551352 PACSIN2Q9UNF0 486 aaPredicted RBP7.81□□□□□ -1.16
SMARCD1-210ENST00000551352 AGAP1Q9UPQ3 857 aa7.81□□□□□ -1.16
SMARCD1-210ENST00000551352 SPAG17Q6Q759 2223 aa7.8□□□□□ -1.16
SMARCD1-210ENST00000551352 PTPRDP23468 1912 aa7.8□□□□□ -1.16
SMARCD1-210ENST00000551352 SPTBN2O15020 2390 aa7.8□□□□□ -1.16
SMARCD1-210ENST00000551352 SMIM28A0A1B0GU29 152 aa7.8□□□□□ -1.16
SMARCD1-210ENST00000551352 WDR27A2RRH5 827 aa7.8□□□□□ -1.16
SMARCD1-210ENST00000551352 ATMINO43313 823 aaPredicted RBP7.8□□□□□ -1.16
SMARCD1-210ENST00000551352 LSM8O95777 96 aaKnown RBP7.8□□□□□ -1.16
SMARCD1-210ENST00000551352 POU2F2P09086 479 aa7.8□□□□□ -1.16
SMARCD1-210ENST00000551352 MYBL1P10243 752 aa7.8□□□□□ -1.16
SMARCD1-210ENST00000551352 P4HA1P13674 534 aa7.8□□□□□ -1.16
SMARCD1-210ENST00000551352 H2AFXP16104 143 aaPredicted RBP7.8□□□□□ -1.16
SMARCD1-210ENST00000551352 CD72P21854 359 aa7.8□□□□□ -1.16
SMARCD1-210ENST00000551352 BRD2P25440 801 aaKnown RBP7.8□□□□□ -1.16
SMARCD1-210ENST00000551352 HOXA9P31269 272 aa7.8□□□□□ -1.16
SMARCD1-210ENST00000551352 CXCR5P32302 372 aa7.8□□□□□ -1.16
SMARCD1-210ENST00000551352 NSFP46459 744 aaKnown RBP7.8□□□□□ -1.16
SMARCD1-210ENST00000551352 RAP1GAPP47736 663 aa7.8□□□□□ -1.16
SMARCD1-210ENST00000551352 DNA2P51530 1060 aa7.8□□□□□ -1.16
SMARCD1-210ENST00000551352 ROR1Q01973 937 aa7.8□□□□□ -1.16
SMARCD1-210ENST00000551352 ZBTB6Q15916 424 aa7.8□□□□□ -1.16
SMARCD1-210ENST00000551352 WDR72Q3MJ13 1102 aa7.8□□□□□ -1.16
SMARCD1-210ENST00000551352 PRSS36Q5K4E3 855 aa7.8□□□□□ -1.16
SMARCD1-210ENST00000551352 PPM1LQ5SGD2 360 aa7.8□□□□□ -1.16
SMARCD1-210ENST00000551352 CCDC181Q5TID7 509 aa7.8□□□□□ -1.16
SMARCD1-210ENST00000551352 DCLRE1AQ6PJP8 1040 aa7.8□□□□□ -1.16
SMARCD1-210ENST00000551352 MON1BQ7L1V2 547 aa7.8□□□□□ -1.16
SMARCD1-210ENST00000551352 CEP57Q86XR8 500 aa7.8□□□□□ -1.16
SMARCD1-210ENST00000551352 PHF13Q86YI8 300 aaPredicted RBP7.8□□□□□ -1.16
SMARCD1-210ENST00000551352 PASD1Q8IV76 773 aa7.8□□□□□ -1.16
SMARCD1-210ENST00000551352 MCOLN2Q8IZK6 566 aa7.8□□□□□ -1.16
SMARCD1-210ENST00000551352 SUMF1Q8NBK3 374 aa7.8□□□□□ -1.16
SMARCD1-210ENST00000551352 MSANTD4Q8NCY6 345 aa7.8□□□□□ -1.16
SMARCD1-210ENST00000551352 BEST2Q8NFU1 509 aa7.8□□□□□ -1.16
SMARCD1-210ENST00000551352 ZNF564Q8TBZ8 553 aaPredicted RBP7.8□□□□□ -1.16
SMARCD1-210ENST00000551352 ZNF606Q8WXB4 792 aa7.8□□□□□ -1.16
SMARCD1-210ENST00000551352 CPA5Q8WXQ8 436 aa7.8□□□□□ -1.16
SMARCD1-210ENST00000551352 C18orf25Q96B23 403 aaPredicted RBP7.8□□□□□ -1.16
SMARCD1-210ENST00000551352 TCEAL4Q96EI5 215 aa7.8□□□□□ -1.16
SMARCD1-210ENST00000551352 CYFIP2Q96F07 1278 aa7.8□□□□□ -1.16
SMARCD1-210ENST00000551352 HES6Q96HZ4 224 aa7.8□□□□□ -1.16
SMARCD1-210ENST00000551352 PBKQ96KB5 322 aa7.8□□□□□ -1.16
SMARCD1-210ENST00000551352 TSPAN18Q96SJ8 248 aa7.8□□□□□ -1.16
SMARCD1-210ENST00000551352 ZSWIM1Q9BR11 485 aa7.8□□□□□ -1.16
SMARCD1-210ENST00000551352 NUP85Q9BW27 656 aa7.8□□□□□ -1.16
SMARCD1-210ENST00000551352 FAM124BQ9H5Z6 455 aaPredicted RBP7.8□□□□□ -1.16
SMARCD1-210ENST00000551352 SMYD3Q9H7B4 428 aa7.8□□□□□ -1.16
SMARCD1-210ENST00000551352 PIDD1Q9HB75 910 aa7.8□□□□□ -1.16
SMARCD1-210ENST00000551352 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.8□□□□□ -1.165e-10■□□□□ 11.2
SMARCD1-210ENST00000551352 UVRAGQ9P2Y5 699 aa7.8□□□□□ -1.16
SMARCD1-210ENST00000551352 CNOT8Q9UFF9 292 aaKnown RBP7.8□□□□□ -1.16
SMARCD1-210ENST00000551352 CDH7Q9ULB5 785 aa7.8□□□□□ -1.16
SMARCD1-210ENST00000551352 CDY1Q9Y6F8 540 aa7.8□□□□□ -1.16
SMARCD1-210ENST00000551352 LAMA1P25391 3075 aa7.79□□□□□ -1.16
SMARCD1-210ENST00000551352 KCNK3O14649 394 aa7.79□□□□□ -1.16
SMARCD1-210ENST00000551352 CILPO75339 1184 aa7.79□□□□□ -1.16
SMARCD1-210ENST00000551352 ABLIM3O94929 683 aa7.79□□□□□ -1.16
SMARCD1-210ENST00000551352 PAEPP09466 180 aa7.79□□□□□ -1.16
SMARCD1-210ENST00000551352 HNRNPA1P09651 372 aaKnown RBP eCLIP7.79□□□□□ -1.16
SMARCD1-210ENST00000551352 KCNE1P15382 129 aa7.79□□□□□ -1.16
SMARCD1-210ENST00000551352 TARSP26639 723 aaKnown RBP7.79□□□□□ -1.16
SMARCD1-210ENST00000551352 HOXC13P31276 330 aa7.79□□□□□ -1.16
SMARCD1-210ENST00000551352 CDH5P33151 784 aaPredicted RBP7.79□□□□□ -1.16
SMARCD1-210ENST00000551352 PAFAH1B1P43034 410 aa7.79□□□□□ -1.16
SMARCD1-210ENST00000551352 RAD23BP54727 409 aa7.79□□□□□ -1.16
SMARCD1-210ENST00000551352 CDH8P55286 799 aa7.79□□□□□ -1.16
SMARCD1-210ENST00000551352 TNNC1P63316 161 aa7.79□□□□□ -1.16
SMARCD1-210ENST00000551352 C1QBPQ07021 282 aaKnown RBP7.79□□□□□ -1.16
SMARCD1-210ENST00000551352 C2orf54Q08AI8 447 aa7.79□□□□□ -1.16
SMARCD1-210ENST00000551352 INCA1Q0VD86 236 aa7.79□□□□□ -1.16
SMARCD1-210ENST00000551352 PTP4A2Q12974 167 aa7.79□□□□□ -1.16
SMARCD1-210ENST00000551352 MRPL58Q14197 206 aaKnown RBP7.79□□□□□ -1.16
SMARCD1-210ENST00000551352 CFAP221Q4G0U5 840 aa7.79□□□□□ -1.16
SMARCD1-210ENST00000551352 ZNF394Q53GI3 561 aa7.79□□□□□ -1.16
SMARCD1-210ENST00000551352 LIN9Q5TKA1 542 aa7.79□□□□□ -1.16
SMARCD1-210ENST00000551352 FBXO38Q6PIJ6 1188 aa7.79□□□□□ -1.16
SMARCD1-210ENST00000551352 HACE1Q8IYU2 909 aa7.79□□□□□ -1.16
SMARCD1-210ENST00000551352 HS6ST3Q8IZP7 471 aa7.79□□□□□ -1.16
SMARCD1-210ENST00000551352 PDCL2Q8N4E4 241 aa7.79□□□□□ -1.16
SMARCD1-210ENST00000551352 TTC39CQ8N584 583 aa7.79□□□□□ -1.16
SMARCD1-210ENST00000551352 LRRC52Q8N7C0 313 aa7.79□□□□□ -1.16
SMARCD1-210ENST00000551352 SPATA4Q8NEY3 305 aa7.79□□□□□ -1.16
SMARCD1-210ENST00000551352 WHAMMQ8TF30 809 aa7.79□□□□□ -1.16
SMARCD1-210ENST00000551352 UBE2Q2Q8WVN8 375 aa7.79□□□□□ -1.16
SMARCD1-210ENST00000551352 TFAP2BQ92481 460 aa7.79□□□□□ -1.16
SMARCD1-210ENST00000551352 NXPE3Q969Y0 559 aa7.79□□□□□ -1.16
SMARCD1-210ENST00000551352 RMDN1Q96DB5 314 aa7.79□□□□□ -1.16
SMARCD1-210ENST00000551352 RSPRY1Q96DX4 576 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms