RNA–Protein interactions for RNA: ENST00000550914.6

PTCH1-221, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-221ENST00000550914 ZNF699Q32M78 642 aa13.63□□□□□ -0.23
PTCH1-221ENST00000550914 ZNF667Q5HYK9 610 aa13.63□□□□□ -0.23
PTCH1-221ENST00000550914 BTBD8Q5XKL5 378 aa13.63□□□□□ -0.23
PTCH1-221ENST00000550914 PAQR9Q6ZVX9 377 aa13.63□□□□□ -0.23
PTCH1-221ENST00000550914 SLC9A9Q8IVB4 645 aa13.63□□□□□ -0.23
PTCH1-221ENST00000550914 PARD3BQ8TEW8 1205 aa13.63□□□□□ -0.23
PTCH1-221ENST00000550914 KCNK16Q96T55 309 aa13.63□□□□□ -0.23
PTCH1-221ENST00000550914 SMYD3Q9H7B4 428 aa13.63□□□□□ -0.23
PTCH1-221ENST00000550914 CHORDC1Q9UHD1 332 aaPredicted RBP13.63□□□□□ -0.23
PTCH1-221ENST00000550914 SH3BP1Q9Y3L3 701 aa13.63□□□□□ -0.23
PTCH1-221ENST00000550914 ANTXRLA6NF34 631 aa13.62□□□□□ -0.23
PTCH1-221ENST00000550914 MAP3K13O43283 966 aa13.62□□□□□ -0.23
PTCH1-221ENST00000550914 ADAM23O75077 832 aa13.62□□□□□ -0.23
PTCH1-221ENST00000550914 P4HA1P13674 534 aa13.62□□□□□ -0.23
PTCH1-221ENST00000550914 BIRC3Q13489 604 aa13.62□□□□□ -0.23
PTCH1-221ENST00000550914 SH3PXD2AQ5TCZ1 1133 aa13.62□□□□□ -0.23
PTCH1-221ENST00000550914 ATL3Q6DD88 541 aa13.62□□□□□ -0.23
PTCH1-221ENST00000550914 SYT12Q8IV01 421 aa13.62□□□□□ -0.23
PTCH1-221ENST00000550914 SFTPA1Q8IWL2 248 aa13.62□□□□□ -0.23
PTCH1-221ENST00000550914 SCAMP5Q8TAC9 235 aa13.62□□□□□ -0.23
PTCH1-221ENST00000550914 PLEKHO2Q8TD55 490 aa13.62□□□□□ -0.23
PTCH1-221ENST00000550914 PIGKQ92643 395 aa13.62□□□□□ -0.23
PTCH1-221ENST00000550914 MED10Q9BTT4 135 aa13.62□□□□□ -0.23
PTCH1-221ENST00000550914 FBXO44Q9H4M3 255 aa13.62□□□□□ -0.23
PTCH1-221ENST00000550914 CCSER2Q9H7U1 834 aa13.62□□□□□ -0.23
PTCH1-221ENST00000550914 CSNK1G1Q9HCP0 422 aa13.62□□□□□ -0.23
PTCH1-221ENST00000550914 SLC39A2Q9NP94 309 aa13.62□□□□□ -0.23
PTCH1-221ENST00000550914 SPHK2Q9NRA0 654 aa13.62□□□□□ -0.23
PTCH1-221ENST00000550914 DMAC2Q9NW81 257 aa13.62□□□□□ -0.23
PTCH1-221ENST00000550914 FAM13BQ9NYF5 915 aa13.62□□□□□ -0.23
PTCH1-221ENST00000550914 BCCIPQ9P287 314 aaKnown RBP eCLIP13.62□□□□□ -0.23
PTCH1-221ENST00000550914 DEC1Q9P2X7 70 aa13.62□□□□□ -0.23
PTCH1-221ENST00000550914 STARD13Q9Y3M8 1113 aa13.62□□□□□ -0.23
PTCH1-221ENST00000550914 WDFY3Q8IZQ1 3526 aa13.61□□□□□ -0.23
PTCH1-221ENST00000550914 TBC1D3BA6NDS4 549 aa13.61□□□□□ -0.23
PTCH1-221ENST00000550914 LRRIQ3A6PVS8 624 aaPredicted RBP13.61□□□□□ -0.23
PTCH1-221ENST00000550914 PATE3B3GLJ2 98 aa13.61□□□□□ -0.23
PTCH1-221ENST00000550914 SCAMP3O14828 347 aaKnown RBP13.61□□□□□ -0.23
PTCH1-221ENST00000550914 TULP3O75386 442 aa13.61□□□□□ -0.23
PTCH1-221ENST00000550914 AP1G2O75843 785 aa13.61□□□□□ -0.23
PTCH1-221ENST00000550914 C4BPAP04003 597 aaKnown RBP13.61□□□□□ -0.23
PTCH1-221ENST00000550914 RPN1P04843 607 aaKnown RBP13.61□□□□□ -0.23
PTCH1-221ENST00000550914 PROS1P07225 676 aa13.61□□□□□ -0.23
PTCH1-221ENST00000550914 CASP4P49662 377 aa13.61□□□□□ -0.23
PTCH1-221ENST00000550914 CDH8P55286 799 aa13.61□□□□□ -0.23
PTCH1-221ENST00000550914 IRX4P78413 519 aa13.61□□□□□ -0.23
PTCH1-221ENST00000550914 KDSRQ06136 332 aa13.61□□□□□ -0.23
PTCH1-221ENST00000550914 ZNF252P-AS1Q0IIN9 211 aa13.61□□□□□ -0.23
PTCH1-221ENST00000550914 SGSM1Q2NKQ1 1148 aa13.61□□□□□ -0.23
PTCH1-221ENST00000550914 MAP7D1Q3KQU3 841 aa13.61□□□□□ -0.23
PTCH1-221ENST00000550914 EMC10Q5UCC4 262 aa13.61□□□□□ -0.23
PTCH1-221ENST00000550914 PEAR1Q5VY43 1037 aaPredicted RBP13.61□□□□□ -0.23
PTCH1-221ENST00000550914 RESP18Q5W5W9 173 aa13.61□□□□□ -0.23
PTCH1-221ENST00000550914 UNC93AQ86WB7 457 aa13.61□□□□□ -0.23
PTCH1-221ENST00000550914 TTC30AQ86WT1 665 aa13.61□□□□□ -0.23
PTCH1-221ENST00000550914 FUKQ8N0W3 1084 aa13.61□□□□□ -0.23
PTCH1-221ENST00000550914 CRYBG2Q8N1P7 616 aa13.61□□□□□ -0.23
PTCH1-221ENST00000550914 ZNF513Q8N8E2 541 aaPredicted RBP13.61□□□□□ -0.23
PTCH1-221ENST00000550914 TERB1Q8NA31 727 aa13.61□□□□□ -0.23
PTCH1-221ENST00000550914 HMGB4Q8WW32 186 aa13.61□□□□□ -0.23
PTCH1-221ENST00000550914 TAF4BQ92750 862 aa13.61□□□□□ -0.23
PTCH1-221ENST00000550914 NUSAP1Q9BXS6 441 aaKnown RBP13.61□□□□□ -0.23
PTCH1-221ENST00000550914 BLZF1Q9H2G9 400 aa13.61□□□□□ -0.23
PTCH1-221ENST00000550914 WASF3Q9UPY6 502 aa13.61□□□□□ -0.23
PTCH1-221ENST00000550914 SPEGQ15772 3267 aa13.61□□□□□ -0.23
PTCH1-221ENST00000550914 ATRXP46100 2492 aa13.61□□□□□ -0.23
PTCH1-221ENST00000550914 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.6□□□□□ -0.23
PTCH1-221ENST00000550914 TCRBV21S2A2A0A5A6 115 aa13.6□□□□□ -0.23
PTCH1-221ENST00000550914 GIPC1O14908 333 aa13.6□□□□□ -0.23
PTCH1-221ENST00000550914 AP5Z1O43299 807 aa13.6□□□□□ -0.23
PTCH1-221ENST00000550914 VNN1O95497 513 aa13.6□□□□□ -0.23
PTCH1-221ENST00000550914 TRIM21P19474 475 aaKnown RBP13.6□□□□□ -0.23
PTCH1-221ENST00000550914 CASP1P29466 404 aa13.6□□□□□ -0.23
PTCH1-221ENST00000550914 CUL4BQ13620 913 aa13.6□□□□□ -0.23
PTCH1-221ENST00000550914 ZACNQ401N2 412 aa13.6□□□□□ -0.23
PTCH1-221ENST00000550914 TRIM61Q5EBN2 209 aa13.6□□□□□ -0.23
PTCH1-221ENST00000550914 LYSMD4Q5XG99 296 aa13.6□□□□□ -0.23
PTCH1-221ENST00000550914 SLC23A3Q6PIS1 610 aa13.6□□□□□ -0.23
PTCH1-221ENST00000550914 SLC36A4Q6YBV0 504 aa13.6□□□□□ -0.23
PTCH1-221ENST00000550914 HTR3DQ70Z44 454 aa13.6□□□□□ -0.23
PTCH1-221ENST00000550914 RABEPKQ7Z6M1 372 aa13.6□□□□□ -0.23
PTCH1-221ENST00000550914 BBS7Q8IWZ6 715 aa13.6□□□□□ -0.23
PTCH1-221ENST00000550914 TMEFF1Q8IYR6 380 aa13.6□□□□□ -0.23
PTCH1-221ENST00000550914 CEP57L1Q8IYX8 460 aa13.6□□□□□ -0.23
PTCH1-221ENST00000550914 TMC2Q8TDI7 906 aa13.6□□□□□ -0.23
PTCH1-221ENST00000550914 RLN3Q8WXF3 142 aa13.6□□□□□ -0.23
PTCH1-221ENST00000550914 SMOQ99835 787 aa13.6□□□□□ -0.23
PTCH1-221ENST00000550914 NACA2Q9H009 215 aa13.6□□□□□ -0.23
PTCH1-221ENST00000550914 SDCBP2Q9H190 292 aa13.6□□□□□ -0.23
PTCH1-221ENST00000550914 TLR8Q9NR97 1041 aaKnown RBP13.6□□□□□ -0.23
PTCH1-221ENST00000550914 KRT82Q9NSB4 513 aa13.6□□□□□ -0.23
PTCH1-221ENST00000550914 GMIPQ9P107 970 aa13.6□□□□□ -0.23
PTCH1-221ENST00000550914 MBD1Q9UIS9 605 aaPredicted RBP13.6□□□□□ -0.23
PTCH1-221ENST00000550914 PCDHA7Q9UN72 937 aa13.6□□□□□ -0.23
PTCH1-221ENST00000550914 ADAMTS9Q9P2N4 1935 aa13.6□□□□□ -0.23
PTCH1-221ENST00000550914 UPK3BL1B0FP48 263 aa13.59□□□□□ -0.23
PTCH1-221ENST00000550914 UPK3BL2E5RIL1 263 aa13.59□□□□□ -0.23
PTCH1-221ENST00000550914 PDXKO00764 312 aa13.59□□□□□ -0.23
PTCH1-221ENST00000550914 IKBKBO14920 756 aa13.59□□□□□ -0.23
PTCH1-221ENST00000550914 KLRC4O43908 158 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms