RNA–Protein interactions for RNA: ENST00000550558.5

ASIC1-206, Transcript of acid sensing ion channel subunit 1, humanhuman

TSL 2

Gene ASIC1, Length 3,819 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ASIC1-206ENST00000550558 TPH1P17752 444 aa17.53■□□□□ 0.4
ASIC1-206ENST00000550558 GTF2A2P52657 109 aa17.53■□□□□ 0.4
ASIC1-206ENST00000550558 POU5F1BQ06416 359 aa17.53■□□□□ 0.4
ASIC1-206ENST00000550558 CPSF2Q9P2I0 782 aaKnown RBP17.53■□□□□ 0.4
ASIC1-206ENST00000550558 TSNAXIP1Q2TAA8 658 aa17.53■□□□□ 0.4
ASIC1-206ENST00000550558 TAF1BQ53T94 588 aaPredicted RBP17.53■□□□□ 0.4
ASIC1-206ENST00000550558 ZNF669Q96BR6 464 aaPredicted RBP17.53■□□□□ 0.4
ASIC1-206ENST00000550558 MAGEB18Q96M61 343 aa17.53■□□□□ 0.4
ASIC1-206ENST00000550558 TRIM56Q9BRZ2 755 aaKnown RBP17.53■□□□□ 0.4
ASIC1-206ENST00000550558 NOP53Q9NZM5 478 aaKnown RBP17.53■□□□□ 0.4
ASIC1-206ENST00000550558 TSR3Q9UJK0 312 aaKnown RBP17.53■□□□□ 0.4
ASIC1-206ENST00000550558 TLK1Q9UKI8 766 aa17.53■□□□□ 0.4
ASIC1-206ENST00000550558 MYO18AQ92614 2054 aaKnown RBP17.52■□□□□ 0.4
ASIC1-206ENST00000550558 PPEF2O14830 753 aa17.52■□□□□ 0.4
ASIC1-206ENST00000550558 EPHB2P29323 1055 aa17.52■□□□□ 0.4
ASIC1-206ENST00000550558 RAB6CQ53S08 254 aa17.52■□□□□ 0.4
ASIC1-206ENST00000550558 SGF29Q96ES7 293 aa17.52■□□□□ 0.4
ASIC1-206ENST00000550558 SNRNP25Q9BV90 132 aaKnown RBP17.52■□□□□ 0.4
ASIC1-206ENST00000550558 RAB6CQ9H0N0 254 aa17.52■□□□□ 0.4
ASIC1-206ENST00000550558 SENP1Q9P0U3 644 aa17.52■□□□□ 0.4
ASIC1-206ENST00000550558 SHOC2Q9UQ13 582 aa17.52■□□□□ 0.4
ASIC1-206ENST00000550558 TNFSF13BQ9Y275 285 aa17.52■□□□□ 0.4
ASIC1-206ENST00000550558 STIP1P31948 543 aaKnown RBP17.52■□□□□ 0.4
ASIC1-206ENST00000550558 CDKN2BP42772 138 aa17.52■□□□□ 0.4
ASIC1-206ENST00000550558 ZNF157P51786 506 aaPredicted RBP17.52■□□□□ 0.4
ASIC1-206ENST00000550558 POU5F1Q01860 360 aaKnown RBP17.52■□□□□ 0.4
ASIC1-206ENST00000550558 PCSK7Q16549 785 aa17.52■□□□□ 0.4
ASIC1-206ENST00000550558 FNBP1LQ5T0N5 605 aa17.52■□□□□ 0.4
ASIC1-206ENST00000550558 DEFB106AQ8N104 65 aa17.52■□□□□ 0.4
ASIC1-206ENST00000550558 STAMBPL1Q96FJ0 436 aa17.52■□□□□ 0.4
ASIC1-206ENST00000550558 ZNF560Q96MR9 790 aa17.52■□□□□ 0.4
ASIC1-206ENST00000550558 FAM193BQ96PV7 902 aaPredicted RBP17.52■□□□□ 0.4
ASIC1-206ENST00000550558 NIFKQ9BYG3 293 aaKnown RBP17.52■□□□□ 0.4
ASIC1-206ENST00000550558 TCRBV7S3A2A0A539 114 aa17.52■□□□□ 0.39
ASIC1-206ENST00000550558 A8MUI8 341 aa17.52■□□□□ 0.39
ASIC1-206ENST00000550558 FZD9O00144 591 aa17.52■□□□□ 0.39
ASIC1-206ENST00000550558 CYB561D2O14569 222 aa17.52■□□□□ 0.39
ASIC1-206ENST00000550558 POMCP01189 267 aa17.52■□□□□ 0.39
ASIC1-206ENST00000550558 F7P08709 466 aaPredicted RBP17.52■□□□□ 0.39
ASIC1-206ENST00000550558 HOXC6P09630 235 aa17.52■□□□□ 0.39
ASIC1-206ENST00000550558 NQO1P15559 274 aaKnown RBP17.52■□□□□ 0.39
ASIC1-206ENST00000550558 ZNF268Q14587 947 aaPredicted RBP17.52■□□□□ 0.39
ASIC1-206ENST00000550558 RASSF3Q86WH2 238 aa17.52■□□□□ 0.39
ASIC1-206ENST00000550558 RNF139Q8WU17 664 aa17.52■□□□□ 0.39
ASIC1-206ENST00000550558 TLCD1Q96CP7 247 aa17.52■□□□□ 0.39
ASIC1-206ENST00000550558 LGMNQ99538 433 aa17.52■□□□□ 0.39
ASIC1-206ENST00000550558 MECRQ9BV79 373 aa17.52■□□□□ 0.39
ASIC1-206ENST00000550558 EIF2AQ9BY44 585 aaKnown RBP17.52■□□□□ 0.39
ASIC1-206ENST00000550558 SLC17A7Q9P2U7 560 aa17.52■□□□□ 0.39
ASIC1-206ENST00000550558 RPS6KL1Q9Y6S9 549 aa17.52■□□□□ 0.39
ASIC1-206ENST00000550558 COL22A1Q8NFW1 1626 aaPredicted RBP17.52■□□□□ 0.39
ASIC1-206ENST00000550558 EEF2KO00418 725 aaKnown RBP17.51■□□□□ 0.39
ASIC1-206ENST00000550558 HSPA4LO95757 839 aa17.51■□□□□ 0.39
ASIC1-206ENST00000550558 SNRPAP09012 282 aaKnown RBP17.51■□□□□ 0.39
ASIC1-206ENST00000550558 MCF2P10911 925 aa17.51■□□□□ 0.39
ASIC1-206ENST00000550558 TAF6P49848 677 aa17.51■□□□□ 0.39
ASIC1-206ENST00000550558 SLC1A5Q15758 541 aa17.51■□□□□ 0.39
ASIC1-206ENST00000550558 SLC10A6Q3KNW5 377 aa17.51■□□□□ 0.39
ASIC1-206ENST00000550558 PMF1Q6P1K2 205 aa17.51■□□□□ 0.39
ASIC1-206ENST00000550558 CLEC4CQ8WTT0 213 aa17.51■□□□□ 0.39
ASIC1-206ENST00000550558 FAM136AQ96C01 138 aa17.51■□□□□ 0.39
ASIC1-206ENST00000550558 ZFP42Q96MM3 310 aa17.51■□□□□ 0.39
ASIC1-206ENST00000550558 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.51■□□□□ 0.39
ASIC1-206ENST00000550558 BFARQ9NZS9 450 aa17.51■□□□□ 0.39
ASIC1-206ENST00000550558 PRG3Q9Y2Y8 225 aaPredicted RBP17.51■□□□□ 0.39
ASIC1-206ENST00000550558 AP1G2O75843 785 aa17.51■□□□□ 0.39
ASIC1-206ENST00000550558 CETPP11597 493 aa17.51■□□□□ 0.39
ASIC1-206ENST00000550558 METTL23Q86XA0 190 aa17.51■□□□□ 0.39
ASIC1-206ENST00000550558 ADGRF2Q8IZF7 708 aa17.51■□□□□ 0.39
ASIC1-206ENST00000550558 SLC4A11Q8NBS3 891 aa17.51■□□□□ 0.39
ASIC1-206ENST00000550558 CKAP2Q8WWK9 683 aa17.51■□□□□ 0.39
ASIC1-206ENST00000550558 PIWIL1Q96J94 861 aaKnown RBP17.51■□□□□ 0.39
ASIC1-206ENST00000550558 RMDN2Q96LZ7 410 aa17.51■□□□□ 0.39
ASIC1-206ENST00000550558 ACSS2Q9NR19 701 aa17.51■□□□□ 0.39
ASIC1-206ENST00000550558 H3BRJ5 948 aa17.51■□□□□ 0.39
ASIC1-206ENST00000550558 GARSP41250 739 aaKnown RBP17.51■□□□□ 0.39
ASIC1-206ENST00000550558 GBE1Q04446 702 aa17.51■□□□□ 0.39
ASIC1-206ENST00000550558 ARHGAP24Q8N264 748 aa17.51■□□□□ 0.39
ASIC1-206ENST00000550558 CD101Q93033 1021 aa17.51■□□□□ 0.39
ASIC1-206ENST00000550558 NCAPGQ9BPX3 1015 aa17.51■□□□□ 0.39
ASIC1-206ENST00000550558 ATXN3LQ9H3M9 355 aa17.51■□□□□ 0.39
ASIC1-206ENST00000550558 DPEP3Q9H4B8 488 aa17.51■□□□□ 0.39
ASIC1-206ENST00000550558 CITO14578 2027 aa17.51■□□□□ 0.39
ASIC1-206ENST00000550558 GOLGA8CPA6NN73 597 aa17.5■□□□□ 0.39
ASIC1-206ENST00000550558 APOC4-APOC2K7ER74 178 aa17.5■□□□□ 0.39
ASIC1-206ENST00000550558 APOC2P02655 101 aa17.5■□□□□ 0.39
ASIC1-206ENST00000550558 MYL2P10916 166 aa17.5■□□□□ 0.39
ASIC1-206ENST00000550558 SLC26A2P50443 739 aa17.5■□□□□ 0.39
ASIC1-206ENST00000550558 ATG16L1Q676U5 607 aa17.5■□□□□ 0.39
ASIC1-206ENST00000550558 LPPQ93052 612 aa17.5■□□□□ 0.39
ASIC1-206ENST00000550558 MLH1P40692 756 aa17.5■□□□□ 0.39
ASIC1-206ENST00000550558 RPL10AP62906 217 aaKnown RBP17.5■□□□□ 0.39
ASIC1-206ENST00000550558 ACVR2BQ13705 512 aa17.5■□□□□ 0.39
ASIC1-206ENST00000550558 SPRED3Q2MJR0 410 aa17.5■□□□□ 0.39
ASIC1-206ENST00000550558 ARL13BQ3SXY8 428 aa17.5■□□□□ 0.39
ASIC1-206ENST00000550558 WDR75Q8IWA0 830 aaKnown RBP17.5■□□□□ 0.39
ASIC1-206ENST00000550558 LMNTD2Q8IXW0 634 aa17.5■□□□□ 0.39
ASIC1-206ENST00000550558 ZNF75CPQ92670 426 aaPredicted RBP17.5■□□□□ 0.39
ASIC1-206ENST00000550558 SYT11Q9BT88 431 aa17.5■□□□□ 0.39
ASIC1-206ENST00000550558 MYLK2Q9H1R3 596 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms