RNA–Protein interactions for RNA: ENST00000550274.1

LETMD1-222, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 809 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-222ENST00000550274 ELMO3Q96BJ8 720 aa13.36□□□□□ -0.27
LETMD1-222ENST00000550274 SPACA7Q96KW9 195 aa13.36□□□□□ -0.27
LETMD1-222ENST00000550274 ADAM33Q9BZ11 813 aa13.36□□□□□ -0.27
LETMD1-222ENST00000550274 LRRC27Q9C0I9 530 aa13.36□□□□□ -0.27
LETMD1-222ENST00000550274 CCSER2Q9H7U1 834 aa13.36□□□□□ -0.27
LETMD1-222ENST00000550274 POLMQ9NP87 494 aaPredicted RBP13.36□□□□□ -0.27
LETMD1-222ENST00000550274 TBC1D14Q9P2M4 693 aa13.36□□□□□ -0.27
LETMD1-222ENST00000550274 CHORDC1Q9UHD1 332 aaPredicted RBP13.36□□□□□ -0.27
LETMD1-222ENST00000550274 HCN2Q9UL51 889 aa13.36□□□□□ -0.27
LETMD1-222ENST00000550274 ZMIZ1Q9ULJ6 1067 aa13.36□□□□□ -0.27
LETMD1-222ENST00000550274 UBE4BO95155 1302 aa13.36□□□□□ -0.27
LETMD1-222ENST00000550274 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.35□□□□□ -0.27
LETMD1-222ENST00000550274 TRIM24O15164 1050 aa13.35□□□□□ -0.27
LETMD1-222ENST00000550274 SPTLC2O15270 562 aa13.35□□□□□ -0.27
LETMD1-222ENST00000550274 MAP3K13O43283 966 aa13.35□□□□□ -0.27
LETMD1-222ENST00000550274 TULP3O75386 442 aa13.35□□□□□ -0.27
LETMD1-222ENST00000550274 RTN3O95197 1032 aaPredicted RBP13.35□□□□□ -0.27
LETMD1-222ENST00000550274 ENGP17813 658 aa13.35□□□□□ -0.27
LETMD1-222ENST00000550274 TNFRSF4P43489 277 aa13.35□□□□□ -0.27
LETMD1-222ENST00000550274 MAPK8P45983 427 aa13.35□□□□□ -0.27
LETMD1-222ENST00000550274 PGFP49763 221 aa13.35□□□□□ -0.27
LETMD1-222ENST00000550274 SLC5A3P53794 718 aa13.35□□□□□ -0.27
LETMD1-222ENST00000550274 GAD2Q05329 585 aa13.35□□□□□ -0.27
LETMD1-222ENST00000550274 TRPC3Q13507 836 aa13.35□□□□□ -0.27
LETMD1-222ENST00000550274 SHC4Q6S5L8 630 aa13.35□□□□□ -0.27
LETMD1-222ENST00000550274 SYT12Q8IV01 421 aa13.35□□□□□ -0.27
LETMD1-222ENST00000550274 OVCA2Q8WZ82 227 aa13.35□□□□□ -0.27
LETMD1-222ENST00000550274 C7orf25Q9BPX7 421 aa13.35□□□□□ -0.27
LETMD1-222ENST00000550274 SCNM1Q9BWG6 230 aa13.35□□□□□ -0.27
LETMD1-222ENST00000550274 SDCBP2Q9H190 292 aa13.35□□□□□ -0.27
LETMD1-222ENST00000550274 CUEDC2Q9H467 287 aa13.35□□□□□ -0.27
LETMD1-222ENST00000550274 ZSCAN16Q9H4T2 348 aaPredicted RBP13.35□□□□□ -0.27
LETMD1-222ENST00000550274 FSCN3Q9NQT6 498 aa13.35□□□□□ -0.27
LETMD1-222ENST00000550274 IL37Q9NZH6 218 aa13.35□□□□□ -0.27
LETMD1-222ENST00000550274 GMIPQ9P107 970 aa13.35□□□□□ -0.27
LETMD1-222ENST00000550274 LAMA5O15230 3695 aa13.34□□□□□ -0.27
LETMD1-222ENST00000550274 CKAP5Q14008 2032 aa13.34□□□□□ -0.27
LETMD1-222ENST00000550274 HOXC11O43248 304 aaPredicted RBP13.34□□□□□ -0.27
LETMD1-222ENST00000550274 STX6O43752 255 aa13.34□□□□□ -0.27
LETMD1-222ENST00000550274 PPP6R2O75170 966 aa13.34□□□□□ -0.27
LETMD1-222ENST00000550274 ZDHHC11BP0C7U3 371 aa13.34□□□□□ -0.27
LETMD1-222ENST00000550274 IRF1P10914 325 aa13.34□□□□□ -0.27
LETMD1-222ENST00000550274 GABRG2P18507 467 aa13.34□□□□□ -0.27
LETMD1-222ENST00000550274 ITPKAP23677 461 aa13.34□□□□□ -0.27
LETMD1-222ENST00000550274 ATICP31939 592 aa13.34□□□□□ -0.27
LETMD1-222ENST00000550274 AMPD3Q01432 767 aa13.34□□□□□ -0.27
LETMD1-222ENST00000550274 LMAN2Q12907 356 aa13.34□□□□□ -0.27
LETMD1-222ENST00000550274 BMT2Q1RMZ1 405 aa13.34□□□□□ -0.27
LETMD1-222ENST00000550274 HECTD3Q5T447 861 aa13.34□□□□□ -0.27
LETMD1-222ENST00000550274 SNX30Q5VWJ9 437 aa13.34□□□□□ -0.27
LETMD1-222ENST00000550274 LYSMD4Q5XG99 296 aa13.34□□□□□ -0.27
LETMD1-222ENST00000550274 SCARA5Q6ZMJ2 495 aa13.34□□□□□ -0.27
LETMD1-222ENST00000550274 UNC13DQ70J99 1090 aa13.34□□□□□ -0.27
LETMD1-222ENST00000550274 TMEM25Q86YD3 366 aa13.34□□□□□ -0.27
LETMD1-222ENST00000550274 MIB1Q86YT6 1006 aa13.34□□□□□ -0.27
LETMD1-222ENST00000550274 FUKQ8N0W3 1084 aa13.34□□□□□ -0.27
LETMD1-222ENST00000550274 PGBD3Q8N328 593 aa13.34□□□□□ -0.27
LETMD1-222ENST00000550274 ZNF513Q8N8E2 541 aaPredicted RBP13.34□□□□□ -0.27
LETMD1-222ENST00000550274 KDF1Q8NAX2 398 aaPredicted RBP13.34□□□□□ -0.27
LETMD1-222ENST00000550274 ZMIZ2Q8NF64 920 aa13.34□□□□□ -0.27
LETMD1-222ENST00000550274 GATA6Q92908 595 aa13.34□□□□□ -0.27
LETMD1-222ENST00000550274 SYAP1Q96A49 352 aaPredicted RBP13.34□□□□□ -0.27
LETMD1-222ENST00000550274 OTUB2Q96DC9 234 aa13.34□□□□□ -0.27
LETMD1-222ENST00000550274 INTS4Q96HW7 963 aaKnown RBP13.34□□□□□ -0.27
LETMD1-222ENST00000550274 MED10Q9BTT4 135 aa13.34□□□□□ -0.27
LETMD1-222ENST00000550274 NUSAP1Q9BXS6 441 aaKnown RBP13.34□□□□□ -0.27
LETMD1-222ENST00000550274 BLZF1Q9H2G9 400 aa13.34□□□□□ -0.27
LETMD1-222ENST00000550274 DMAP1Q9NPF5 467 aaPredicted RBP13.34□□□□□ -0.27
LETMD1-222ENST00000550274 TFIP11Q9UBB9 837 aaKnown RBP13.34□□□□□ -0.27
LETMD1-222ENST00000550274 PILRBQ9UKJ0 227 aa13.34□□□□□ -0.27
LETMD1-222ENST00000550274 SH3BP1Q9Y3L3 701 aa13.34□□□□□ -0.27
LETMD1-222ENST00000550274 PTPRBP23467 1997 aa13.33□□□□□ -0.28
LETMD1-222ENST00000550274 TP53BP1Q12888 1972 aaPredicted RBP13.33□□□□□ -0.28
LETMD1-222ENST00000550274 FAM92AA1XBS5 289 aa13.33□□□□□ -0.28
LETMD1-222ENST00000550274 TBC1D3BA6NDS4 549 aa13.33□□□□□ -0.28
LETMD1-222ENST00000550274 PHACTR2O75167 634 aa13.33□□□□□ -0.28
LETMD1-222ENST00000550274 BEST1O76090 585 aa13.33□□□□□ -0.28
LETMD1-222ENST00000550274 WASP42768 502 aa13.33□□□□□ -0.28
LETMD1-222ENST00000550274 TUBP50607 506 aa13.33□□□□□ -0.28
LETMD1-222ENST00000550274 SNRPFP62306 86 aaKnown RBP13.33□□□□□ -0.28
LETMD1-222ENST00000550274 ORC1Q13415 861 aa13.33□□□□□ -0.28
LETMD1-222ENST00000550274 BIRC3Q13489 604 aa13.33□□□□□ -0.28
LETMD1-222ENST00000550274 ANO4Q32M45 955 aa13.33□□□□□ -0.28
LETMD1-222ENST00000550274 ZNF699Q32M78 642 aa13.33□□□□□ -0.28
LETMD1-222ENST00000550274 C10orf76Q5T2E6 689 aa13.33□□□□□ -0.28
LETMD1-222ENST00000550274 PEAR1Q5VY43 1037 aaPredicted RBP13.33□□□□□ -0.28
LETMD1-222ENST00000550274 KIAA1211LQ6NV74 962 aa13.33□□□□□ -0.28
LETMD1-222ENST00000550274 SLC23A3Q6PIS1 610 aa13.33□□□□□ -0.28
LETMD1-222ENST00000550274 C12orf56Q8IXR9 622 aa13.33□□□□□ -0.28
LETMD1-222ENST00000550274 DEFB119Q8N690 84 aa13.33□□□□□ -0.28
LETMD1-222ENST00000550274 TERB1Q8NA31 727 aa13.33□□□□□ -0.28
LETMD1-222ENST00000550274 IQUBQ8NA54 791 aa13.33□□□□□ -0.28
LETMD1-222ENST00000550274 RNF25Q96BH1 459 aaPredicted RBP13.33□□□□□ -0.28
LETMD1-222ENST00000550274 SMARCD1Q96GM5 515 aa13.33□□□□□ -0.28
LETMD1-222ENST00000550274 DUSP9Q99956 384 aaKnown RBP13.33□□□□□ -0.28
LETMD1-222ENST00000550274 VRTNQ9H8Y1 702 aa13.33□□□□□ -0.28
LETMD1-222ENST00000550274 SLC39A2Q9NP94 309 aa13.33□□□□□ -0.28
LETMD1-222ENST00000550274 SPHK2Q9NRA0 654 aa13.33□□□□□ -0.28
LETMD1-222ENST00000550274 KRT82Q9NSB4 513 aa13.33□□□□□ -0.28
LETMD1-222ENST00000550274 CALCOCO1Q9P1Z2 691 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms