RNA–Protein interactions for RNA: ENST00000550020.6

TMEM116-209, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-209ENST00000550020 TMEM51Q9NW97 253 aa9.32□□□□□ -0.92
TMEM116-209ENST00000550020 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.32□□□□□ -0.92
TMEM116-209ENST00000550020 TBK1Q9UHD2 729 aa9.32□□□□□ -0.92
TMEM116-209ENST00000550020 ZMYND8Q9ULU4 1186 aaPredicted RBP9.32□□□□□ -0.92
TMEM116-209ENST00000550020 STAP1Q9ULZ2 295 aa9.32□□□□□ -0.92
TMEM116-209ENST00000550020 GNEQ9Y223 722 aaKnown RBP9.32□□□□□ -0.92
TMEM116-209ENST00000550020 PIN4Q9Y237 131 aaKnown RBP9.32□□□□□ -0.92
TMEM116-209ENST00000550020 GINS2Q9Y248 185 aa9.32□□□□□ -0.92
TMEM116-209ENST00000550020 PLXNB2O15031 1838 aa9.31□□□□□ -0.92
TMEM116-209ENST00000550020 SMIM28A0A1B0GU29 152 aa9.31□□□□□ -0.92
TMEM116-209ENST00000550020 ANKRD65E5RJM6 399 aa9.31□□□□□ -0.92
TMEM116-209ENST00000550020 H3BRJ5 948 aa9.31□□□□□ -0.92
TMEM116-209ENST00000550020 XPO1O14980 1071 aaKnown RBP9.31□□□□□ -0.92
TMEM116-209ENST00000550020 ATP5HO75947 161 aa9.31□□□□□ -0.92
TMEM116-209ENST00000550020 KRT37O76014 449 aa9.31□□□□□ -0.92
TMEM116-209ENST00000550020 FBXO21O94952 628 aa9.31□□□□□ -0.92
TMEM116-209ENST00000550020 PFKMP08237 780 aa9.31□□□□□ -0.92
TMEM116-209ENST00000550020 INHBAP08476 426 aa9.31□□□□□ -0.92
TMEM116-209ENST00000550020 MYL3P08590 195 aa9.31□□□□□ -0.92
TMEM116-209ENST00000550020 ETS1P14921 441 aa9.31□□□□□ -0.92
TMEM116-209ENST00000550020 MAGEA6P43360 314 aa9.31□□□□□ -0.92
TMEM116-209ENST00000550020 RGS7P49802 495 aa9.31□□□□□ -0.92
TMEM116-209ENST00000550020 ZNF135P52742 658 aaPredicted RBP9.31□□□□□ -0.92
TMEM116-209ENST00000550020 INHBEP58166 350 aa9.31□□□□□ -0.92
TMEM116-209ENST00000550020 ATP11AP98196 1134 aa9.31□□□□□ -0.92
TMEM116-209ENST00000550020 CDK16Q00536 496 aa9.31□□□□□ -0.92
TMEM116-209ENST00000550020 PDE4CQ08493 712 aa9.31□□□□□ -0.92
TMEM116-209ENST00000550020 CCDC15Q0P6D6 951 aa9.31□□□□□ -0.92
TMEM116-209ENST00000550020 MTFR1Q15390 333 aa9.31□□□□□ -0.92
TMEM116-209ENST00000550020 DPYSL2Q16555 572 aa9.31□□□□□ -0.92
TMEM116-209ENST00000550020 CDO1Q16878 200 aa9.31□□□□□ -0.92
TMEM116-209ENST00000550020 SOWAHAQ2M3V2 549 aa9.31□□□□□ -0.92
TMEM116-209ENST00000550020 BBS9Q3SYG4 887 aa9.31□□□□□ -0.92
TMEM116-209ENST00000550020 RNF43Q68DV7 783 aa9.31□□□□□ -0.92
TMEM116-209ENST00000550020 PMF1Q6P1K2 205 aa9.31□□□□□ -0.92
TMEM116-209ENST00000550020 ADGRD1Q6QNK2 874 aa9.31□□□□□ -0.92
TMEM116-209ENST00000550020 TTC30AQ86WT1 665 aa9.31□□□□□ -0.92
TMEM116-209ENST00000550020 CCNJLQ8IV13 435 aa9.31□□□□□ -0.92
TMEM116-209ENST00000550020 UNC45BQ8IWX7 931 aa9.31□□□□□ -0.92
TMEM116-209ENST00000550020 TRIM42Q8IWZ5 723 aa9.31□□□□□ -0.92
TMEM116-209ENST00000550020 VPS52Q8N1B4 723 aa9.31□□□□□ -0.92
TMEM116-209ENST00000550020 TMEM86AQ8N2M4 240 aa9.31□□□□□ -0.92
TMEM116-209ENST00000550020 PLD5Q8N7P1 536 aa9.31□□□□□ -0.92
TMEM116-209ENST00000550020 GLIS1Q8NBF1 620 aa9.31□□□□□ -0.92
TMEM116-209ENST00000550020 FBXO36Q8NEA4 188 aa9.31□□□□□ -0.92
TMEM116-209ENST00000550020 NPLOC4Q8TAT6 608 aa9.31□□□□□ -0.92
TMEM116-209ENST00000550020 LRRC8CQ8TDW0 803 aa9.31□□□□□ -0.92
TMEM116-209ENST00000550020 FBF1Q8TES7 1133 aa9.31□□□□□ -0.92
TMEM116-209ENST00000550020 CENPIQ92674 756 aaPredicted RBP9.31□□□□□ -0.92
TMEM116-209ENST00000550020 PWWP2AQ96N64 755 aa9.31□□□□□ -0.92
TMEM116-209ENST00000550020 OSMRQ99650 979 aa9.31□□□□□ -0.92
TMEM116-209ENST00000550020 TRIM62Q9BVG3 475 aa9.31□□□□□ -0.92
TMEM116-209ENST00000550020 PITPNM3Q9BZ71 974 aa9.31□□□□□ -0.92
TMEM116-209ENST00000550020 XAB2Q9HCS7 855 aaKnown RBP9.31□□□□□ -0.92
TMEM116-209ENST00000550020 PNPLA8Q9NP80 782 aa9.31□□□□□ -0.92
TMEM116-209ENST00000550020 CHST12Q9NRB3 414 aa9.31□□□□□ -0.92
TMEM116-209ENST00000550020 FAM49BQ9NUQ9 324 aa9.31□□□□□ -0.92
TMEM116-209ENST00000550020 CTNNAL1Q9UBT7 734 aa9.31□□□□□ -0.92
TMEM116-209ENST00000550020 TJP2Q9UDY2 1190 aa9.31□□□□□ -0.92
TMEM116-209ENST00000550020 TUBGCP4Q9UGJ1 667 aa9.31□□□□□ -0.92
TMEM116-209ENST00000550020 RABGEF1Q9UJ41 708 aa9.31□□□□□ -0.92
TMEM116-209ENST00000550020 STARD13Q9Y3M8 1113 aa9.31□□□□□ -0.92
TMEM116-209ENST00000550020 RAD54BQ9Y620 910 aa9.31□□□□□ -0.92
TMEM116-209ENST00000550020 ARHGEF37A1IGU5 675 aa9.3□□□□□ -0.92
TMEM116-209ENST00000550020 KCNN4O15554 427 aa9.3□□□□□ -0.92
TMEM116-209ENST00000550020 PAPSS1O43252 624 aaPredicted RBP9.3□□□□□ -0.92
TMEM116-209ENST00000550020 DAB1O75553 588 aa9.3□□□□□ -0.92
TMEM116-209ENST00000550020 GCATO75600 419 aa9.3□□□□□ -0.92
TMEM116-209ENST00000550020 DCTN3O75935 186 aa9.3□□□□□ -0.92
TMEM116-209ENST00000550020 CELF2O95319 508 aaKnown RBP9.3□□□□□ -0.92
TMEM116-209ENST00000550020 MT-ND3P03897 115 aa9.3□□□□□ -0.92
TMEM116-209ENST00000550020 CD48P09326 243 aa9.3□□□□□ -0.92
TMEM116-209ENST00000550020 TROVE2P10155 538 aaKnown RBP eCLIP9.3□□□□□ -0.92
TMEM116-209ENST00000550020 ALADP13716 330 aa9.3□□□□□ -0.92
TMEM116-209ENST00000550020 TPSB2P20231 275 aa9.3□□□□□ -0.92
TMEM116-209ENST00000550020 LRPAP1P30533 357 aa9.3□□□□□ -0.92
TMEM116-209ENST00000550020 FDFT1P37268 417 aa9.3□□□□□ -0.92
TMEM116-209ENST00000550020 MATKP42679 507 aa9.3□□□□□ -0.92
TMEM116-209ENST00000550020 SCTRP47872 440 aa9.3□□□□□ -0.92
TMEM116-209ENST00000550020 LHX1P48742 406 aa9.3□□□□□ -0.92
TMEM116-209ENST00000550020 ZNF200P98182 395 aaPredicted RBP9.3□□□□□ -0.92
TMEM116-209ENST00000550020 KCNJ11Q14654 390 aa9.3□□□□□ -0.92
TMEM116-209ENST00000550020 LRRC14Q15048 493 aa9.3□□□□□ -0.92
TMEM116-209ENST00000550020 TPSAB1Q15661 275 aa9.3□□□□□ -0.92
TMEM116-209ENST00000550020 PKN2Q16513 984 aaKnown RBP9.3□□□□□ -0.92
TMEM116-209ENST00000550020 PDK4Q16654 411 aa9.3□□□□□ -0.92
TMEM116-209ENST00000550020 KCTD19Q17RG1 926 aaPredicted RBP9.3□□□□□ -0.92
TMEM116-209ENST00000550020 SLC45A4Q5BKX6 768 aa9.3□□□□□ -0.92
TMEM116-209ENST00000550020 UBAP2Q5T6F2 1119 aaKnown RBP9.3□□□□□ -0.92
TMEM116-209ENST00000550020 C1orf228Q6PIY5 440 aa9.3□□□□□ -0.92
TMEM116-209ENST00000550020 ZC3H18Q86VM9 953 aaKnown RBP9.3□□□□□ -0.92
TMEM116-209ENST00000550020 ANKMY2Q8IV38 441 aa9.3□□□□□ -0.92
TMEM116-209ENST00000550020 SCUBE3Q8IX30 993 aa9.3□□□□□ -0.92
TMEM116-209ENST00000550020 ADGRF2Q8IZF7 708 aa9.3□□□□□ -0.92
TMEM116-209ENST00000550020 CYP4X1Q8N118 509 aa9.3□□□□□ -0.92
TMEM116-209ENST00000550020 C12orf29Q8N999 325 aa9.3□□□□□ -0.92
TMEM116-209ENST00000550020 GDAP1Q8TB36 358 aa9.3□□□□□ -0.92
TMEM116-209ENST00000550020 ZNF398Q8TD17 642 aa9.3□□□□□ -0.92
TMEM116-209ENST00000550020 DNAJB3Q8WWF6 145 aa9.3□□□□□ -0.92
TMEM116-209ENST00000550020 KCTD13Q8WZ19 329 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms