RNA–Protein interactions for RNA: ENST00000549883.5

HDAC7-229, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-229ENST00000549883 USP3Q9Y6I4 520 aa10.32□□□□□ -0.76
HDAC7-229ENST00000549883 PIK3R2O00459 728 aa10.31□□□□□ -0.76
HDAC7-229ENST00000549883 LAMTOR5O43504 91 aa10.31□□□□□ -0.76
HDAC7-229ENST00000549883 GREM1O60565 184 aa10.31□□□□□ -0.76
HDAC7-229ENST00000549883 TLR5O60602 858 aa10.31□□□□□ -0.76
HDAC7-229ENST00000549883 GNA14O95837 355 aa10.31□□□□□ -0.76
HDAC7-229ENST00000549883 CYP17A1P05093 508 aa10.31□□□□□ -0.76
HDAC7-229ENST00000549883 CCDC192P0DO97 292 aa10.31□□□□□ -0.76
HDAC7-229ENST00000549883 TDGF1P13385 188 aa10.31□□□□□ -0.76
HDAC7-229ENST00000549883 PFKLP17858 780 aa10.31□□□□□ -0.76
HDAC7-229ENST00000549883 TBXAS1P24557 533 aaPredicted RBP10.31□□□□□ -0.76
HDAC7-229ENST00000549883 OPRD1P41143 372 aa10.31□□□□□ -0.76
HDAC7-229ENST00000549883 SLC6A11P48066 632 aa10.31□□□□□ -0.76
HDAC7-229ENST00000549883 ZNF132P52740 706 aa10.31□□□□□ -0.76
HDAC7-229ENST00000549883 PDGFRLQ15198 375 aa10.31□□□□□ -0.76
HDAC7-229ENST00000549883 PKDCCQ504Y2 493 aa10.31□□□□□ -0.76
HDAC7-229ENST00000549883 SGO2Q562F6 1265 aa10.31□□□□□ -0.76
HDAC7-229ENST00000549883 TMEM196Q5HYL7 178 aa10.31□□□□□ -0.76
HDAC7-229ENST00000549883 BHLHA9Q7RTU4 235 aa10.31□□□□□ -0.76
HDAC7-229ENST00000549883 C12orf40Q86WS4 652 aa10.31□□□□□ -0.76
HDAC7-229ENST00000549883 BBS7Q8IWZ6 715 aa10.31□□□□□ -0.76
HDAC7-229ENST00000549883 ADGRG2Q8IZP9 1017 aa10.31□□□□□ -0.76
HDAC7-229ENST00000549883 CPA6Q8N4T0 437 aa10.31□□□□□ -0.76
HDAC7-229ENST00000549883 ANKRD52Q8NB46 1076 aa10.31□□□□□ -0.76
HDAC7-229ENST00000549883 RBBP8NLQ8NC74 664 aaPredicted RBP10.31□□□□□ -0.76
HDAC7-229ENST00000549883 P2RY11Q96G91 374 aa10.31□□□□□ -0.76
HDAC7-229ENST00000549883 KLF16Q9BXK1 252 aaPredicted RBP10.31□□□□□ -0.76
HDAC7-229ENST00000549883 FBXO44Q9H4M3 255 aa10.31□□□□□ -0.76
HDAC7-229ENST00000549883 PRMT8Q9NR22 394 aaPredicted RBP10.31□□□□□ -0.76
HDAC7-229ENST00000549883 SAMSN1Q9NSI8 373 aaKnown RBP10.31□□□□□ -0.76
HDAC7-229ENST00000549883 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.31□□□□□ -0.76
HDAC7-229ENST00000549883 PIEZO1Q92508 2521 aa10.31□□□□□ -0.76
HDAC7-229ENST00000549883 TRDMT1O14717 391 aaKnown RBP10.3□□□□□ -0.76
HDAC7-229ENST00000549883 NCAM2O15394 837 aa10.3□□□□□ -0.76
HDAC7-229ENST00000549883 P4HA2O15460 535 aa10.3□□□□□ -0.76
HDAC7-229ENST00000549883 VDRP11473 427 aa10.3□□□□□ -0.76
HDAC7-229ENST00000549883 RARGP13631 454 aa10.3□□□□□ -0.76
HDAC7-229ENST00000549883 RGS7P49802 495 aa10.3□□□□□ -0.76
HDAC7-229ENST00000549883 TUBP50607 506 aa10.3□□□□□ -0.76
HDAC7-229ENST00000549883 PDE6CP51160 858 aa10.3□□□□□ -0.76
HDAC7-229ENST00000549883 TKTL1P51854 596 aa10.3□□□□□ -0.76
HDAC7-229ENST00000549883 DHCR24Q15392 516 aa10.3□□□□□ -0.76
HDAC7-229ENST00000549883 RAB41Q5JT25 222 aa10.3□□□□□ -0.76
HDAC7-229ENST00000549883 MIIPQ5JXC2 388 aa10.3□□□□□ -0.76
HDAC7-229ENST00000549883 DPY19L2P1Q6NXN4 242 aa10.3□□□□□ -0.76
HDAC7-229ENST00000549883 RHBDF2Q6PJF5 856 aa10.3□□□□□ -0.76
HDAC7-229ENST00000549883 C11orf57Q6ZUT1 292 aaPredicted RBP10.3□□□□□ -0.76
HDAC7-229ENST00000549883 CCDC186Q7Z3E2 898 aa10.3□□□□□ -0.76
HDAC7-229ENST00000549883 TTC39CQ8N584 583 aa10.3□□□□□ -0.76
HDAC7-229ENST00000549883 P2RY13Q9BPV8 354 aa10.3□□□□□ -0.76
HDAC7-229ENST00000549883 ULBP1Q9BZM6 244 aa10.3□□□□□ -0.76
HDAC7-229ENST00000549883 PNPLA8Q9NP80 782 aa10.3□□□□□ -0.76
HDAC7-229ENST00000549883 SIX2Q9NPC8 291 aa10.3□□□□□ -0.76
HDAC7-229ENST00000549883 UBE2TQ9NPD8 197 aaPredicted RBP10.3□□□□□ -0.76
HDAC7-229ENST00000549883 CYLDQ9NQC7 956 aa10.3□□□□□ -0.76
HDAC7-229ENST00000549883 TLR8Q9NR97 1041 aaKnown RBP10.3□□□□□ -0.76
HDAC7-229ENST00000549883 NAGPAQ9UK23 515 aa10.3□□□□□ -0.76
HDAC7-229ENST00000549883 GPR179Q6PRD1 2367 aa10.3□□□□□ -0.76
HDAC7-229ENST00000549883 ZFHX2Q9C0A1 2572 aaPredicted RBP10.29□□□□□ -0.76
HDAC7-229ENST00000549883 SDK1Q7Z5N4 2213 aa10.29□□□□□ -0.76
HDAC7-229ENST00000549883 PRR23AA6NEV1 266 aa10.29□□□□□ -0.76
HDAC7-229ENST00000549883 BECN2A8MW95 431 aa10.29□□□□□ -0.76
HDAC7-229ENST00000549883 PROB1E7EW31 1015 aa10.29□□□□□ -0.76
HDAC7-229ENST00000549883 TRIM24O15164 1050 aa10.29□□□□□ -0.76
HDAC7-229ENST00000549883 GFRA3O60609 400 aa10.29□□□□□ -0.76
HDAC7-229ENST00000549883 KLKB1P03952 638 aa10.29□□□□□ -0.76
HDAC7-229ENST00000549883 PNMA6AP0CW24 399 aaPredicted RBP10.29□□□□□ -0.76
HDAC7-229ENST00000549883 KRT5P13647 590 aa10.29□□□□□ -0.76
HDAC7-229ENST00000549883 TRIM21P19474 475 aaKnown RBP10.29□□□□□ -0.76
HDAC7-229ENST00000549883 PON1P27169 355 aa10.29□□□□□ -0.76
HDAC7-229ENST00000549883 MAGEA9P43362 315 aa10.29□□□□□ -0.76
HDAC7-229ENST00000549883 MTIF2P46199 727 aaKnown RBP10.29□□□□□ -0.76
HDAC7-229ENST00000549883 YWHAEP62258 255 aaKnown RBP10.29□□□□□ -0.76
HDAC7-229ENST00000549883 GCNT1Q02742 428 aa10.29□□□□□ -0.76
HDAC7-229ENST00000549883 ADIGQ0VDE8 80 aa10.29□□□□□ -0.76
HDAC7-229ENST00000549883 SRSF5Q13243 272 aaKnown RBP10.29□□□□□ -0.76
HDAC7-229ENST00000549883 C10orf120Q5SQS8 335 aa10.29□□□□□ -0.76
HDAC7-229ENST00000549883 LY6G5CQ5SRR4 150 aa10.29□□□□□ -0.76
HDAC7-229ENST00000549883 PMF1Q6P1K2 205 aa10.29□□□□□ -0.76
HDAC7-229ENST00000549883 DENND1BQ6P3S1 775 aa10.29□□□□□ -0.76
HDAC7-229ENST00000549883 TRIM65Q6PJ69 517 aa10.29□□□□□ -0.76
HDAC7-229ENST00000549883 LCLAT1Q6UWP7 414 aa10.29□□□□□ -0.76
HDAC7-229ENST00000549883 RBM43Q6ZSC3 357 aaKnown RBP10.29□□□□□ -0.76
HDAC7-229ENST00000549883 TMEM25Q86YD3 366 aa10.29□□□□□ -0.76
HDAC7-229ENST00000549883 CLEC4CQ8WTT0 213 aa10.29□□□□□ -0.76
HDAC7-229ENST00000549883 NELL1Q92832 810 aa10.29□□□□□ -0.76
HDAC7-229ENST00000549883 SECISBP2LQ93073 1101 aaKnown RBP10.29□□□□□ -0.76
HDAC7-229ENST00000549883 ATP2A3Q93084 1043 aa10.29□□□□□ -0.76
HDAC7-229ENST00000549883 MSANTD3Q96H12 275 aa10.29□□□□□ -0.76
HDAC7-229ENST00000549883 GBP4Q96PP9 640 aa10.29□□□□□ -0.76
HDAC7-229ENST00000549883 NACA2Q9H009 215 aa10.29□□□□□ -0.76
HDAC7-229ENST00000549883 ZDHHC4Q9NPG8 344 aa10.29□□□□□ -0.76
HDAC7-229ENST00000549883 FBXO4Q9UKT5 387 aa10.29□□□□□ -0.76
HDAC7-229ENST00000549883 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.29□□□□□ -0.76
HDAC7-229ENST00000549883 RIF1Q5UIP0 2472 aaKnown RBP10.29□□□□□ -0.76
HDAC7-229ENST00000549883 FAM186AA6NE01 2351 aa10.29□□□□□ -0.76
HDAC7-229ENST00000549883 MYO15AQ9UKN7 3530 aa10.28□□□□□ -0.76
HDAC7-229ENST00000549883 PTPRZ1P23471 2315 aaPredicted RBP10.28□□□□□ -0.76
HDAC7-229ENST00000549883 E2F8A0AVK6 867 aa10.28□□□□□ -0.76
HDAC7-229ENST00000549883 YJEFN3A6XGL0 299 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms