RNA–Protein interactions for RNA: ENST00000549534.1

TROAP-210, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TROAP, Length 839 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-210ENST00000549534 ZMAT2Q96NC0 199 aaKnown RBP11.32□□□□□ -0.6
TROAP-210ENST00000549534 FUCA2Q9BTY2 467 aa11.32□□□□□ -0.6
TROAP-210ENST00000549534 CCDC94Q9BW85 323 aaPredicted RBP11.32□□□□□ -0.6
TROAP-210ENST00000549534 TTC12Q9H892 705 aaPredicted RBP11.32□□□□□ -0.6
TROAP-210ENST00000549534 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.32□□□□□ -0.6
TROAP-210ENST00000549534 SLC12A7Q9Y666 1083 aa11.32□□□□□ -0.6
TROAP-210ENST00000549534 ZNF638Q14966 1978 aaKnown RBP11.31□□□□□ -0.6
TROAP-210ENST00000549534 LRRIQ4A6NIV6 560 aa11.31□□□□□ -0.6
TROAP-210ENST00000549534 CPLX1O14810 134 aa11.31□□□□□ -0.6
TROAP-210ENST00000549534 OPA1O60313 960 aa11.31□□□□□ -0.6
TROAP-210ENST00000549534 VPS4BO75351 444 aa11.31□□□□□ -0.6
TROAP-210ENST00000549534 RNF224P0DH78 156 aa11.31□□□□□ -0.6
TROAP-210ENST00000549534 GRM5P41594 1212 aa11.31□□□□□ -0.6
TROAP-210ENST00000549534 RPL10AP62906 217 aaKnown RBP11.31□□□□□ -0.6
TROAP-210ENST00000549534 ATP2C1P98194 919 aaPredicted RBP11.31□□□□□ -0.6
TROAP-210ENST00000549534 EXOSC10Q01780 885 aaKnown RBP11.31□□□□□ -0.6
TROAP-210ENST00000549534 ZC2HC1CQ53FD0 456 aaPredicted RBP11.31□□□□□ -0.6
TROAP-210ENST00000549534 MMP21Q8N119 569 aa11.31□□□□□ -0.6
TROAP-210ENST00000549534 FSIP1Q8NA03 581 aa11.31□□□□□ -0.6
TROAP-210ENST00000549534 FANCBQ8NB91 859 aa11.31□□□□□ -0.6
TROAP-210ENST00000549534 LRRC15Q8TF66 581 aa11.31□□□□□ -0.6
TROAP-210ENST00000549534 GJA10Q969M2 543 aa11.31□□□□□ -0.6
TROAP-210ENST00000549534 NACC1Q96RE7 527 aa11.31□□□□□ -0.6
TROAP-210ENST00000549534 ACOX2Q99424 681 aa11.31□□□□□ -0.6
TROAP-210ENST00000549534 SLKQ9H2G2 1235 aaPredicted RBP11.31□□□□□ -0.6
TROAP-210ENST00000549534 RPF1Q9H9Y2 349 aaKnown RBP11.31□□□□□ -0.6
TROAP-210ENST00000549534 WRAP73Q9P2S5 460 aaPredicted RBP11.31□□□□□ -0.6
TROAP-210ENST00000549534 PHTF1Q9UMS5 762 aa11.31□□□□□ -0.6
TROAP-210ENST00000549534 VPS4AQ9UN37 437 aa11.31□□□□□ -0.6
TROAP-210ENST00000549534 RAD54BQ9Y620 910 aa11.31□□□□□ -0.6
TROAP-210ENST00000549534 TMEM131Q92545 1883 aa11.31□□□□□ -0.6
TROAP-210ENST00000549534 LEFTY2O00292 366 aa11.3□□□□□ -0.6
TROAP-210ENST00000549534 HOXC11O43248 304 aaPredicted RBP11.3□□□□□ -0.6
TROAP-210ENST00000549534 MTSS1O43312 755 aa11.3□□□□□ -0.6
TROAP-210ENST00000549534 TULP3O75386 442 aa11.3□□□□□ -0.6
TROAP-210ENST00000549534 CLDN1O95832 211 aa11.3□□□□□ -0.6
TROAP-210ENST00000549534 PDCP20941 246 aa11.3□□□□□ -0.6
TROAP-210ENST00000549534 ANTXR2P58335 489 aa11.3□□□□□ -0.6
TROAP-210ENST00000549534 RACK1P63244 317 aaKnown RBP11.3□□□□□ -0.6
TROAP-210ENST00000549534 ISXQ2M1V0 245 aa11.3□□□□□ -0.6
TROAP-210ENST00000549534 ADCK5Q3MIX3 580 aa11.3□□□□□ -0.6
TROAP-210ENST00000549534 EEF1DP3Q658K8 133 aa11.3□□□□□ -0.6
TROAP-210ENST00000549534 LAYNQ6UX15 382 aa11.3□□□□□ -0.6
TROAP-210ENST00000549534 Q6ZUG5 572 aa11.3□□□□□ -0.6
TROAP-210ENST00000549534 MB21D2Q8IYB1 491 aaPredicted RBP11.3□□□□□ -0.6
TROAP-210ENST00000549534 OXR1Q8N573 874 aa11.3□□□□□ -0.6
TROAP-210ENST00000549534 GALNT11Q8NCW6 608 aa11.3□□□□□ -0.6
TROAP-210ENST00000549534 PRCCQ92733 491 aaPredicted RBP11.3□□□□□ -0.6
TROAP-210ENST00000549534 SIPA1Q96FS4 1042 aa11.3□□□□□ -0.6
TROAP-210ENST00000549534 PRR11Q96HE9 360 aaPredicted RBP11.3□□□□□ -0.6
TROAP-210ENST00000549534 LLPHQ9BRT6 129 aaKnown RBP11.3□□□□□ -0.6
TROAP-210ENST00000549534 REPIN1Q9BWE0 567 aaKnown RBP11.3□□□□□ -0.6
TROAP-210ENST00000549534 AGXT2Q9BYV1 514 aa11.3□□□□□ -0.6
TROAP-210ENST00000549534 ZMYND12Q9H0C1 365 aa11.3□□□□□ -0.6
TROAP-210ENST00000549534 ZCWPW1Q9H0M4 648 aa11.3□□□□□ -0.6
TROAP-210ENST00000549534 RBM28Q9NW13 759 aaKnown RBP11.3□□□□□ -0.6
TROAP-210ENST00000549534 CNTN3Q9P232 1028 aa11.3□□□□□ -0.6
TROAP-210ENST00000549534 TBC1D14Q9P2M4 693 aa11.3□□□□□ -0.6
TROAP-210ENST00000549534 MAGED2Q9UNF1 606 aaPredicted RBP11.3□□□□□ -0.6
TROAP-210ENST00000549534 PCDHGA4Q9Y5G9 962 aa11.3□□□□□ -0.6
TROAP-210ENST00000549534 MYO18AQ92614 2054 aaKnown RBP11.3□□□□□ -0.6
TROAP-210ENST00000549534 CNTNAP5Q8WYK1 1306 aa11.3□□□□□ -0.6
TROAP-210ENST00000549534 LRRK1Q38SD2 2015 aa11.3□□□□□ -0.6
TROAP-210ENST00000549534 DENND4CQ5VZ89 1909 aa11.29□□□□□ -0.6
TROAP-210ENST00000549534 SH2B2O14492 632 aaPredicted RBP11.29□□□□□ -0.6
TROAP-210ENST00000549534 HNRNPRO43390 633 aaKnown RBP11.29□□□□□ -0.6
TROAP-210ENST00000549534 TSPAN3O60637 253 aa11.29□□□□□ -0.6
TROAP-210ENST00000549534 DIAPH2O60879 1101 aa11.29□□□□□ -0.6
TROAP-210ENST00000549534 SEMA7AO75326 666 aa11.29□□□□□ -0.6
TROAP-210ENST00000549534 NOL4O94818 638 aa11.29□□□□□ -0.6
TROAP-210ENST00000549534 GP1BAP07359 652 aa11.29□□□□□ -0.6
TROAP-210ENST00000549534 ITGA2BP08514 1039 aa11.29□□□□□ -0.6
TROAP-210ENST00000549534 ACADMP11310 421 aa11.29□□□□□ -0.6
TROAP-210ENST00000549534 RXRAP19793 462 aa11.29□□□□□ -0.6
TROAP-210ENST00000549534 PAX3P23760 479 aa11.29□□□□□ -0.6
TROAP-210ENST00000549534 GNA11P29992 359 aa11.29□□□□□ -0.6
TROAP-210ENST00000549534 RXRGP48443 463 aa11.29□□□□□ -0.6
TROAP-210ENST00000549534 HMGN5P82970 282 aaKnown RBP11.29□□□□□ -0.6
TROAP-210ENST00000549534 PPP2R5CQ13362 524 aa11.29□□□□□ -0.6
TROAP-210ENST00000549534 FUT11Q495W5 492 aa11.29□□□□□ -0.6
TROAP-210ENST00000549534 SLC39A12Q504Y0 691 aa11.29□□□□□ -0.6
TROAP-210ENST00000549534 BORAQ6PGQ7 559 aa11.29□□□□□ -0.6
TROAP-210ENST00000549534 DSTYKQ6XUX3 929 aa11.29□□□□□ -0.6
TROAP-210ENST00000549534 TIPARPQ7Z3E1 657 aaKnown RBP11.29□□□□□ -0.6
TROAP-210ENST00000549534 CCDC12Q8WUD4 166 aaPredicted RBP11.29□□□□□ -0.6
TROAP-210ENST00000549534 WASF1Q92558 559 aa11.29□□□□□ -0.6
TROAP-210ENST00000549534 BRF1Q92994 677 aa11.29□□□□□ -0.6
TROAP-210ENST00000549534 C18orf25Q96B23 403 aaPredicted RBP11.29□□□□□ -0.6
TROAP-210ENST00000549534 LXNQ9BS40 222 aa11.29□□□□□ -0.6
TROAP-210ENST00000549534 MKRN2Q9H000 416 aaKnown RBP11.29□□□□□ -0.6
TROAP-210ENST00000549534 ZSWIM4Q9H7M6 989 aa11.29□□□□□ -0.6
TROAP-210ENST00000549534 GDF3Q9NR23 364 aa11.29□□□□□ -0.6
TROAP-210ENST00000549534 ACSL6Q9UKU0 697 aa11.29□□□□□ -0.6
TROAP-210ENST00000549534 NAP1L2Q9ULW6 460 aaPredicted RBP11.29□□□□□ -0.6
TROAP-210ENST00000549534 SVILO95425 2214 aa11.29□□□□□ -0.6
TROAP-210ENST00000549534 MED13LQ71F56 2210 aa11.28□□□□□ -0.6
TROAP-210ENST00000549534 EML1O00423 815 aa11.28□□□□□ -0.6
TROAP-210ENST00000549534 ZBTB43O43298 467 aa11.28□□□□□ -0.6
TROAP-210ENST00000549534 EDIL3O43854 480 aa11.28□□□□□ -0.6
TROAP-210ENST00000549534 PRKCGP05129 697 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms