RNA–Protein interactions for RNA: ENST00000548522.5

SSH1-208, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-208ENST00000548522 STXBP4Q6ZWJ1 553 aa17.48■□□□□ 0.39
SSH1-208ENST00000548522 FAM35AQ86V20 835 aa17.48■□□□□ 0.39
SSH1-208ENST00000548522 PGBD3Q8N328 593 aa17.48■□□□□ 0.39
SSH1-208ENST00000548522 OR2I1PQ8NGU4 316 aa17.48■□□□□ 0.39
SSH1-208ENST00000548522 ZNF507Q8TCN5 953 aa17.48■□□□□ 0.39
SSH1-208ENST00000548522 SCFD1Q8WVM8 642 aa17.48■□□□□ 0.39
SSH1-208ENST00000548522 DHX58Q96C10 678 aa17.48■□□□□ 0.39
SSH1-208ENST00000548522 KIAA1586Q9HCI6 787 aa17.48■□□□□ 0.39
SSH1-208ENST00000548522 FOXD4L1Q9NU39 408 aa17.48■□□□□ 0.39
SSH1-208ENST00000548522 GMIPQ9P107 970 aa17.48■□□□□ 0.39
SSH1-208ENST00000548522 PILRBQ9UKJ0 227 aa17.48■□□□□ 0.39
SSH1-208ENST00000548522 MORC2Q9Y6X9 1032 aaPredicted RBP17.48■□□□□ 0.39
SSH1-208ENST00000548522 MYOFQ9NZM1 2061 aa17.48■□□□□ 0.39
SSH1-208ENST00000548522 E2F8A0AVK6 867 aa17.47■□□□□ 0.39
SSH1-208ENST00000548522 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.47■□□□□ 0.39
SSH1-208ENST00000548522 HOXC11O43248 304 aaPredicted RBP17.47■□□□□ 0.39
SSH1-208ENST00000548522 CFIP05156 583 aa17.47■□□□□ 0.39
SSH1-208ENST00000548522 GABRG2P18507 467 aa17.47■□□□□ 0.39
SSH1-208ENST00000548522 TNFRSF4P43489 277 aa17.47■□□□□ 0.39
SSH1-208ENST00000548522 NASPP49321 788 aaPredicted RBP17.47■□□□□ 0.39
SSH1-208ENST00000548522 LMAN2Q12907 356 aa17.47■□□□□ 0.39
SSH1-208ENST00000548522 ORC1Q13415 861 aa17.47■□□□□ 0.39
SSH1-208ENST00000548522 HSF5Q4G112 596 aaPredicted RBP17.47■□□□□ 0.39
SSH1-208ENST00000548522 C10orf76Q5T2E6 689 aa17.47■□□□□ 0.39
SSH1-208ENST00000548522 PEAR1Q5VY43 1037 aaPredicted RBP17.47■□□□□ 0.39
SSH1-208ENST00000548522 DDX42Q86XP3 938 aaKnown RBP eCLIP17.47■□□□□ 0.39
SSH1-208ENST00000548522 TMEM25Q86YD3 366 aa17.47■□□□□ 0.39
SSH1-208ENST00000548522 ZNF513Q8N8E2 541 aaPredicted RBP17.47■□□□□ 0.39
SSH1-208ENST00000548522 NUSAP1Q9BXS6 441 aaKnown RBP17.47■□□□□ 0.39
SSH1-208ENST00000548522 SDCBP2Q9H190 292 aa17.47■□□□□ 0.39
SSH1-208ENST00000548522 CD93Q9NPY3 652 aa17.47■□□□□ 0.39
SSH1-208ENST00000548522 CALCOCO1Q9P1Z2 691 aa17.47■□□□□ 0.39
SSH1-208ENST00000548522 KLK13Q9UKR3 277 aa17.47■□□□□ 0.39
SSH1-208ENST00000548522 ITPR1Q14643 2758 aa17.46■□□□□ 0.39
SSH1-208ENST00000548522 A0A1W2PQF6 199 aa17.46■□□□□ 0.39
SSH1-208ENST00000548522 TBC1D3BA6NDS4 549 aa17.46■□□□□ 0.39
SSH1-208ENST00000548522 FAM193AP78312 1265 aa17.46■□□□□ 0.39
SSH1-208ENST00000548522 GAD2Q05329 585 aa17.46■□□□□ 0.39
SSH1-208ENST00000548522 NFKBIBQ15653 356 aa17.46■□□□□ 0.39
SSH1-208ENST00000548522 ANO4Q32M45 955 aa17.46■□□□□ 0.39
SSH1-208ENST00000548522 HECTD3Q5T447 861 aa17.46■□□□□ 0.39
SSH1-208ENST00000548522 EGFLAMQ63HQ2 1017 aa17.46■□□□□ 0.39
SSH1-208ENST00000548522 SLC23A3Q6PIS1 610 aa17.46■□□□□ 0.39
SSH1-208ENST00000548522 PIP4P1Q86T03 277 aa17.46■□□□□ 0.39
SSH1-208ENST00000548522 TERB1Q8NA31 727 aa17.46■□□□□ 0.39
SSH1-208ENST00000548522 XXYLT1Q8NBI6 393 aa17.46■□□□□ 0.39
SSH1-208ENST00000548522 ACOX2Q99424 681 aa17.46■□□□□ 0.39
SSH1-208ENST00000548522 GTPBP2Q9BX10 602 aaKnown RBP17.46■□□□□ 0.39
SSH1-208ENST00000548522 KRT82Q9NSB4 513 aa17.46■□□□□ 0.39
SSH1-208ENST00000548522 TBC1D14Q9P2M4 693 aa17.46■□□□□ 0.39
SSH1-208ENST00000548522 HMGXB4Q9UGU5 601 aa17.46■□□□□ 0.39
SSH1-208ENST00000548522 SH3BP1Q9Y3L3 701 aa17.46■□□□□ 0.39
SSH1-208ENST00000548522 SMG1Q96Q15 3661 aaKnown RBP17.45■□□□□ 0.38
SSH1-208ENST00000548522 RTN3O95197 1032 aaPredicted RBP17.45■□□□□ 0.38
SSH1-208ENST00000548522 STAU1O95793 577 aaKnown RBP17.45■□□□□ 0.38
SSH1-208ENST00000548522 CCDC130P13994 396 aa17.45■□□□□ 0.38
SSH1-208ENST00000548522 HOXB2P14652 356 aa17.45■□□□□ 0.38
SSH1-208ENST00000548522 SIM1P81133 766 aaPredicted RBP17.45■□□□□ 0.38
SSH1-208ENST00000548522 RPL6Q02878 288 aaKnown RBP17.45■□□□□ 0.38
SSH1-208ENST00000548522 EHHADHQ08426 723 aa17.45■□□□□ 0.38
SSH1-208ENST00000548522 SEMA3BQ13214 749 aa17.45■□□□□ 0.38
SSH1-208ENST00000548522 TRPC3Q13507 836 aa17.45■□□□□ 0.38
SSH1-208ENST00000548522 STK38Q15208 465 aa17.45■□□□□ 0.38
SSH1-208ENST00000548522 FUKQ8N0W3 1084 aa17.45■□□□□ 0.38
SSH1-208ENST00000548522 LINC00301Q8NCQ3 95 aa17.45■□□□□ 0.38
SSH1-208ENST00000548522 PDZD8Q8NEN9 1154 aa17.45■□□□□ 0.38
SSH1-208ENST00000548522 ZMIZ2Q8NF64 920 aa17.45■□□□□ 0.38
SSH1-208ENST00000548522 ZCCHC14Q8WYQ9 949 aaKnown RBP17.45■□□□□ 0.38
SSH1-208ENST00000548522 OVCA2Q8WZ82 227 aa17.45■□□□□ 0.38
SSH1-208ENST00000548522 MED10Q9BTT4 135 aa17.45■□□□□ 0.38
SSH1-208ENST00000548522 SLC6A17Q9H1V8 727 aa17.45■□□□□ 0.38
SSH1-208ENST00000548522 BLZF1Q9H2G9 400 aa17.45■□□□□ 0.38
SSH1-208ENST00000548522 CD248Q9HCU0 757 aa17.45■□□□□ 0.38
SSH1-208ENST00000548522 DMAP1Q9NPF5 467 aaPredicted RBP17.45■□□□□ 0.38
SSH1-208ENST00000548522 SPHK2Q9NRA0 654 aa17.45■□□□□ 0.38
SSH1-208ENST00000548522 IL37Q9NZH6 218 aa17.45■□□□□ 0.38
SSH1-208ENST00000548522 DEC1Q9P2X7 70 aa17.45■□□□□ 0.38
SSH1-208ENST00000548522 NBEAQ8NFP9 2946 aa17.45■□□□□ 0.38
SSH1-208ENST00000548522 LOC400499M0QZD8 3231 aa17.44■□□□□ 0.38
SSH1-208ENST00000548522 SRRM3A6NNA2 597 aaPredicted RBP17.44■□□□□ 0.38
SSH1-208ENST00000548522 GREM1O60565 184 aa17.44■□□□□ 0.38
SSH1-208ENST00000548522 BEST1O76090 585 aa17.44■□□□□ 0.38
SSH1-208ENST00000548522 CLSTN1O94985 981 aa17.44■□□□□ 0.38
SSH1-208ENST00000548522 TBX18O95935 607 aa17.44■□□□□ 0.38
SSH1-208ENST00000548522 ZDHHC11BP0C7U3 371 aa17.44■□□□□ 0.38
SSH1-208ENST00000548522 ZNF699Q32M78 642 aa17.44■□□□□ 0.38
SSH1-208ENST00000548522 SNX30Q5VWJ9 437 aa17.44■□□□□ 0.38
SSH1-208ENST00000548522 SHC4Q6S5L8 630 aa17.44■□□□□ 0.38
SSH1-208ENST00000548522 TOGARAM2Q6ZUX3 1019 aa17.44■□□□□ 0.38
SSH1-208ENST00000548522 SLC41A1Q8IVJ1 513 aa17.44■□□□□ 0.38
SSH1-208ENST00000548522 P2RY11Q96G91 374 aa17.44■□□□□ 0.38
SSH1-208ENST00000548522 SMOQ99835 787 aa17.44■□□□□ 0.38
SSH1-208ENST00000548522 CAPN10Q9HC96 672 aa17.44■□□□□ 0.38
SSH1-208ENST00000548522 UBE4BO95155 1302 aa17.44■□□□□ 0.38
SSH1-208ENST00000548522 PLXND1Q9Y4D7 1925 aa17.43■□□□□ 0.38
SSH1-208ENST00000548522 PCDH15Q96QU1 1955 aa17.43■□□□□ 0.38
SSH1-208ENST00000548522 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.43■□□□□ 0.38
SSH1-208ENST00000548522 IGHV1OR15-9A0A0B4J2B8 117 aa17.43■□□□□ 0.38
SSH1-208ENST00000548522 FAM92AA1XBS5 289 aa17.43■□□□□ 0.38
SSH1-208ENST00000548522 LRRIQ3A6PVS8 624 aaPredicted RBP17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms