RNA–Protein interactions for RNA: ENST00000547517.5

RAB5C-204, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB5C, Length 1,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-204ENST00000547517 IRF1P10914 325 aa12.45□□□□□ -0.42
RAB5C-204ENST00000547517 TKTL1P51854 596 aa12.45□□□□□ -0.42
RAB5C-204ENST00000547517 NUBP1P53384 320 aa12.45□□□□□ -0.42
RAB5C-204ENST00000547517 PTPN5P54829 565 aa12.45□□□□□ -0.42
RAB5C-204ENST00000547517 MYL5Q02045 173 aa12.45□□□□□ -0.42
RAB5C-204ENST00000547517 ADIGQ0VDE8 80 aa12.45□□□□□ -0.42
RAB5C-204ENST00000547517 TCF15Q12870 199 aa12.45□□□□□ -0.42
RAB5C-204ENST00000547517 RUNX3Q13761 415 aa12.45□□□□□ -0.42
RAB5C-204ENST00000547517 CDKAL1Q5VV42 579 aa12.45□□□□□ -0.42
RAB5C-204ENST00000547517 TXNDC11Q6PKC3 985 aa12.45□□□□□ -0.42
RAB5C-204ENST00000547517 LCLAT1Q6UWP7 414 aa12.45□□□□□ -0.42
RAB5C-204ENST00000547517 ENOSF1Q7L5Y1 443 aa12.45□□□□□ -0.42
RAB5C-204ENST00000547517 CCDC186Q7Z3E2 898 aa12.45□□□□□ -0.42
RAB5C-204ENST00000547517 RALGPS2Q86X27 583 aaPredicted RBP12.45□□□□□ -0.42
RAB5C-204ENST00000547517 DDX42Q86XP3 938 aaKnown RBP eCLIP12.45□□□□□ -0.42
RAB5C-204ENST00000547517 CPA6Q8N4T0 437 aa12.45□□□□□ -0.42
RAB5C-204ENST00000547517 SECISBP2LQ93073 1101 aaKnown RBP12.45□□□□□ -0.42
RAB5C-204ENST00000547517 ATP2A3Q93084 1043 aa12.45□□□□□ -0.42
RAB5C-204ENST00000547517 ZFRQ96KR1 1074 aaKnown RBP12.45□□□□□ -0.42
RAB5C-204ENST00000547517 ZSWIM1Q9BR11 485 aa12.45□□□□□ -0.42
RAB5C-204ENST00000547517 LRRC4Q9HBW1 653 aa12.45□□□□□ -0.42
RAB5C-204ENST00000547517 SIX2Q9NPC8 291 aa12.45□□□□□ -0.42
RAB5C-204ENST00000547517 DLGAP2Q9P1A6 1054 aa12.45□□□□□ -0.42
RAB5C-204ENST00000547517 NUDT5Q9UKK9 219 aa12.45□□□□□ -0.42
RAB5C-204ENST00000547517 KIAA1257Q9ULG3 409 aa12.45□□□□□ -0.42
RAB5C-204ENST00000547517 USP3Q9Y6I4 520 aa12.45□□□□□ -0.42
RAB5C-204ENST00000547517 MUC6Q6W4X9 2439 aa12.45□□□□□ -0.42
RAB5C-204ENST00000547517 MDM4O15151 490 aa12.44□□□□□ -0.42
RAB5C-204ENST00000547517 TBX18O95935 607 aa12.44□□□□□ -0.42
RAB5C-204ENST00000547517 RARGP13631 454 aa12.44□□□□□ -0.42
RAB5C-204ENST00000547517 USP8P40818 1118 aa12.44□□□□□ -0.42
RAB5C-204ENST00000547517 PLA2G4AP47712 749 aa12.44□□□□□ -0.42
RAB5C-204ENST00000547517 RGS7P49802 495 aa12.44□□□□□ -0.42
RAB5C-204ENST00000547517 PON2Q15165 354 aa12.44□□□□□ -0.42
RAB5C-204ENST00000547517 KRT31Q15323 416 aa12.44□□□□□ -0.42
RAB5C-204ENST00000547517 STILQ15468 1287 aa12.44□□□□□ -0.42
RAB5C-204ENST00000547517 EML3Q32P44 896 aa12.44□□□□□ -0.42
RAB5C-204ENST00000547517 PKDCCQ504Y2 493 aa12.44□□□□□ -0.42
RAB5C-204ENST00000547517 RAB41Q5JT25 222 aa12.44□□□□□ -0.42
RAB5C-204ENST00000547517 C10orf120Q5SQS8 335 aa12.44□□□□□ -0.42
RAB5C-204ENST00000547517 C1orf228Q6PIY5 440 aa12.44□□□□□ -0.42
RAB5C-204ENST00000547517 SCD5Q86SK9 330 aa12.44□□□□□ -0.42
RAB5C-204ENST00000547517 SIX6OS1Q8N1H7 587 aa12.44□□□□□ -0.42
RAB5C-204ENST00000547517 FAM81BQ96LP2 452 aa12.44□□□□□ -0.42
RAB5C-204ENST00000547517 NELL2Q99435 816 aa12.44□□□□□ -0.42
RAB5C-204ENST00000547517 LSM14BQ9BX40 385 aaKnown RBP12.44□□□□□ -0.42
RAB5C-204ENST00000547517 OSBPL6Q9BZF3 934 aa12.44□□□□□ -0.42
RAB5C-204ENST00000547517 ULBP1Q9BZM6 244 aa12.44□□□□□ -0.42
RAB5C-204ENST00000547517 UBXN6Q9BZV1 441 aa12.44□□□□□ -0.42
RAB5C-204ENST00000547517 ECT2Q9H8V3 914 aa12.44□□□□□ -0.42
RAB5C-204ENST00000547517 CYLDQ9NQC7 956 aa12.44□□□□□ -0.42
RAB5C-204ENST00000547517 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.44□□□□□ -0.42
RAB5C-204ENST00000547517 FANCLQ9NW38 375 aa12.44□□□□□ -0.42
RAB5C-204ENST00000547517 CNTN6Q9UQ52 1028 aa12.44□□□□□ -0.42
RAB5C-204ENST00000547517 SH3BP1Q9Y3L3 701 aa12.44□□□□□ -0.42
RAB5C-204ENST00000547517 ARIH1Q9Y4X5 557 aaPredicted RBP12.44□□□□□ -0.42
RAB5C-204ENST00000547517 BECN2A8MW95 431 aa12.43□□□□□ -0.42
RAB5C-204ENST00000547517 H0Y858 1186 aa12.43□□□□□ -0.42
RAB5C-204ENST00000547517 PIK3R2O00459 728 aa12.43□□□□□ -0.42
RAB5C-204ENST00000547517 NCAM2O15394 837 aa12.43□□□□□ -0.42
RAB5C-204ENST00000547517 THAP12O43422 761 aa12.43□□□□□ -0.42
RAB5C-204ENST00000547517 LETM1O95202 739 aaPredicted RBP12.43□□□□□ -0.42
RAB5C-204ENST00000547517 NFATC1O95644 943 aa12.43□□□□□ -0.42
RAB5C-204ENST00000547517 ZBED1O96006 694 aa12.43□□□□□ -0.42
RAB5C-204ENST00000547517 TPM2P07951 284 aa12.43□□□□□ -0.42
RAB5C-204ENST00000547517 PNMA6AP0CW24 399 aaPredicted RBP12.43□□□□□ -0.42
RAB5C-204ENST00000547517 RALAP11233 206 aa12.43□□□□□ -0.42
RAB5C-204ENST00000547517 LCP1P13796 627 aa12.43□□□□□ -0.42
RAB5C-204ENST00000547517 GNA15P30679 374 aa12.43□□□□□ -0.42
RAB5C-204ENST00000547517 ATP5C1P36542 298 aaKnown RBP12.43□□□□□ -0.42
RAB5C-204ENST00000547517 MLLT6P55198 1093 aaPredicted RBP12.43□□□□□ -0.42
RAB5C-204ENST00000547517 YWHAGP61981 247 aaKnown RBP eCLIP12.43□□□□□ -0.42
RAB5C-204ENST00000547517 ANGPT1Q15389 498 aa12.43□□□□□ -0.42
RAB5C-204ENST00000547517 CNGA2Q16280 664 aa12.43□□□□□ -0.42
RAB5C-204ENST00000547517 ANO6Q4KMQ2 910 aa12.43□□□□□ -0.42
RAB5C-204ENST00000547517 TADA2BQ86TJ2 420 aa12.43□□□□□ -0.42
RAB5C-204ENST00000547517 ZNF687Q8N1G0 1237 aa12.43□□□□□ -0.42
RAB5C-204ENST00000547517 ARHGAP18Q8N392 663 aa12.43□□□□□ -0.42
RAB5C-204ENST00000547517 AOPEPQ8N6M6 819 aa12.43□□□□□ -0.42
RAB5C-204ENST00000547517 SHC3Q92529 594 aa12.43□□□□□ -0.42
RAB5C-204ENST00000547517 NDRG1Q92597 394 aaKnown RBP12.43□□□□□ -0.42
RAB5C-204ENST00000547517 CHFRQ96EP1 664 aa12.43□□□□□ -0.42
RAB5C-204ENST00000547517 VPS16Q9H269 839 aa12.43□□□□□ -0.42
RAB5C-204ENST00000547517 LINC00597Q9H2U6 94 aa12.43□□□□□ -0.42
RAB5C-204ENST00000547517 ACP6Q9NPH0 428 aa12.43□□□□□ -0.42
RAB5C-204ENST00000547517 RBM12Q9NTZ6 932 aaKnown RBP12.43□□□□□ -0.42
RAB5C-204ENST00000547517 FAM86C1Q9NVL1 165 aa12.43□□□□□ -0.42
RAB5C-204ENST00000547517 SPATA6Q9NWH7 488 aaPredicted RBP12.43□□□□□ -0.42
RAB5C-204ENST00000547517 RASAL2Q9UJF2 1139 aa12.43□□□□□ -0.42
RAB5C-204ENST00000547517 DNAJC12Q9UKB3 198 aa12.43□□□□□ -0.42
RAB5C-204ENST00000547517 SLC9A3R1O14745 358 aaPredicted RBP12.42□□□□□ -0.42
RAB5C-204ENST00000547517 MED7O43513 233 aa12.42□□□□□ -0.42
RAB5C-204ENST00000547517 GJA4P35212 333 aa12.42□□□□□ -0.42
RAB5C-204ENST00000547517 MAGEA9P43362 315 aa12.42□□□□□ -0.42
RAB5C-204ENST00000547517 PSEN1P49768 467 aa12.42□□□□□ -0.42
RAB5C-204ENST00000547517 NHLH1Q02575 133 aa12.42□□□□□ -0.42
RAB5C-204ENST00000547517 GOLGA8FQ08AF8 430 aa12.42□□□□□ -0.42
RAB5C-204ENST00000547517 GOLGA8DPQ0D2H9 430 aa12.42□□□□□ -0.42
RAB5C-204ENST00000547517 KCNMA1Q12791 1236 aa12.42□□□□□ -0.42
RAB5C-204ENST00000547517 RAPGEF1Q13905 1077 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms