RNA–Protein interactions for RNA: ENST00000546820.5

PTCH1-213, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 864 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-213ENST00000546820 ARID3BQ8IVW6 561 aaPredicted RBP14.46□□□□□ -0.09
PTCH1-213ENST00000546820 GJD3Q8N144 294 aa14.46□□□□□ -0.09
PTCH1-213ENST00000546820 ZNF276Q8N554 614 aa14.46□□□□□ -0.09
PTCH1-213ENST00000546820 C1orf131Q8NDD1 294 aaKnown RBP14.46□□□□□ -0.09
PTCH1-213ENST00000546820 ADAMTS19Q8TE59 1207 aa14.46□□□□□ -0.09
PTCH1-213ENST00000546820 C18orf8Q96DM3 657 aa14.46□□□□□ -0.09
PTCH1-213ENST00000546820 ZSWIM3Q96MP5 696 aa14.46□□□□□ -0.09
PTCH1-213ENST00000546820 ASB16Q96NS5 453 aa14.46□□□□□ -0.09
PTCH1-213ENST00000546820 HAUS4Q9H6D7 363 aa14.46□□□□□ -0.09
PTCH1-213ENST00000546820 TRPV4Q9HBA0 871 aa14.46□□□□□ -0.09
PTCH1-213ENST00000546820 ABCC13Q9NSE7 274 aa14.46□□□□□ -0.09
PTCH1-213ENST00000546820 ZNF638Q14966 1978 aaKnown RBP14.45□□□□□ -0.1
PTCH1-213ENST00000546820 COL6A3P12111 3177 aa14.45□□□□□ -0.1
PTCH1-213ENST00000546820 C2orf78A6NCI8 922 aa14.45□□□□□ -0.1
PTCH1-213ENST00000546820 E5RJQ4 531 aa14.45□□□□□ -0.1
PTCH1-213ENST00000546820 ANHXE9PGG2 379 aa14.45□□□□□ -0.1
PTCH1-213ENST00000546820 PIK3R2O00459 728 aa14.45□□□□□ -0.1
PTCH1-213ENST00000546820 TADA3O75528 432 aa14.45□□□□□ -0.1
PTCH1-213ENST00000546820 ADCY5O95622 1261 aa14.45□□□□□ -0.1
PTCH1-213ENST00000546820 SKILP12757 684 aa14.45□□□□□ -0.1
PTCH1-213ENST00000546820 RARGP13631 454 aa14.45□□□□□ -0.1
PTCH1-213ENST00000546820 NSFP46459 744 aaKnown RBP14.45□□□□□ -0.1
PTCH1-213ENST00000546820 DAOAP59103 153 aa14.45□□□□□ -0.1
PTCH1-213ENST00000546820 TDRD12Q587J7 1177 aaKnown RBP14.45□□□□□ -0.1
PTCH1-213ENST00000546820 EFHC1Q5JVL4 640 aa14.45□□□□□ -0.1
PTCH1-213ENST00000546820 STXBP5Q5T5C0 1151 aa14.45□□□□□ -0.1
PTCH1-213ENST00000546820 NAA35Q5VZE5 725 aa14.45□□□□□ -0.1
PTCH1-213ENST00000546820 RSRC2Q7L4I2 434 aaKnown RBP14.45□□□□□ -0.1
PTCH1-213ENST00000546820 CELF5Q8N6W0 485 aaKnown RBP14.45□□□□□ -0.1
PTCH1-213ENST00000546820 ARL14EPQ8N8R7 260 aaPredicted RBP14.45□□□□□ -0.1
PTCH1-213ENST00000546820 RNF139Q8WU17 664 aa14.45□□□□□ -0.1
PTCH1-213ENST00000546820 CPA5Q8WXQ8 436 aa14.45□□□□□ -0.1
PTCH1-213ENST00000546820 ELSPBP1Q96BH3 223 aa14.45□□□□□ -0.1
PTCH1-213ENST00000546820 CPXM1Q96SM3 734 aa14.45□□□□□ -0.1
PTCH1-213ENST00000546820 CYP2S1Q96SQ9 504 aa14.45□□□□□ -0.1
PTCH1-213ENST00000546820 UHRF1Q96T88 793 aaPredicted RBP14.45□□□□□ -0.1
PTCH1-213ENST00000546820 OLA1Q9NTK5 396 aaKnown RBP14.45□□□□□ -0.1
PTCH1-213ENST00000546820 TDP1Q9NUW8 608 aa14.45□□□□□ -0.1
PTCH1-213ENST00000546820 CYTH4Q9UIA0 394 aa14.45□□□□□ -0.1
PTCH1-213ENST00000546820 TCF20Q9UGU0 1960 aaKnown RBP14.45□□□□□ -0.1
PTCH1-213ENST00000546820 PRUNE2Q8WUY3 3088 aa14.44□□□□□ -0.1
PTCH1-213ENST00000546820 GOLGA6L6A8MZA4 724 aa14.44□□□□□ -0.1
PTCH1-213ENST00000546820 NRG2O14511 850 aaPredicted RBP14.44□□□□□ -0.1
PTCH1-213ENST00000546820 TLR5O60602 858 aa14.44□□□□□ -0.1
PTCH1-213ENST00000546820 ECI2O75521 394 aa14.44□□□□□ -0.1
PTCH1-213ENST00000546820 GABBR2O75899 941 aa14.44□□□□□ -0.1
PTCH1-213ENST00000546820 GLI1P08151 1106 aa14.44□□□□□ -0.1
PTCH1-213ENST00000546820 HNRNPH3P31942 346 aaKnown RBP14.44□□□□□ -0.1
PTCH1-213ENST00000546820 NOMO3P69849 1222 aa14.44□□□□□ -0.1
PTCH1-213ENST00000546820 TBX2Q13207 712 aaPredicted RBP14.44□□□□□ -0.1
PTCH1-213ENST00000546820 ZNF268Q14587 947 aaPredicted RBP14.44□□□□□ -0.1
PTCH1-213ENST00000546820 CLEC16AQ2KHT3 1053 aa14.44□□□□□ -0.1
PTCH1-213ENST00000546820 BSPRYQ5W0U4 402 aa14.44□□□□□ -0.1
PTCH1-213ENST00000546820 OR6B2Q6IFH4 312 aa14.44□□□□□ -0.1
PTCH1-213ENST00000546820 KLHDC10Q6PID8 442 aa14.44□□□□□ -0.1
PTCH1-213ENST00000546820 PARM1Q6UWI2 310 aa14.44□□□□□ -0.1
PTCH1-213ENST00000546820 TOGARAM2Q6ZUX3 1019 aa14.44□□□□□ -0.1
PTCH1-213ENST00000546820 SCD5Q86SK9 330 aa14.44□□□□□ -0.1
PTCH1-213ENST00000546820 DDX42Q86XP3 938 aaKnown RBP eCLIP14.44□□□□□ -0.1
PTCH1-213ENST00000546820 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.44□□□□□ -0.1
PTCH1-213ENST00000546820 RNF38Q9H0F5 515 aa14.44□□□□□ -0.1
PTCH1-213ENST00000546820 KIF9Q9HAQ2 790 aa14.44□□□□□ -0.1
PTCH1-213ENST00000546820 KCNK12Q9HB15 430 aa14.44□□□□□ -0.1
PTCH1-213ENST00000546820 NMUR1Q9HB89 426 aa14.44□□□□□ -0.1
PTCH1-213ENST00000546820 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.44□□□□□ -0.1
PTCH1-213ENST00000546820 THG1LQ9NWX6 298 aaKnown RBP14.44□□□□□ -0.1
PTCH1-213ENST00000546820 OBP2AQ9NY56 170 aa14.44□□□□□ -0.1
PTCH1-213ENST00000546820 DNMT3LQ9UJW3 386 aa14.44□□□□□ -0.1
PTCH1-213ENST00000546820 STRIP2Q9ULQ0 834 aa14.44□□□□□ -0.1
PTCH1-213ENST00000546820 EYSQ5T1H1 3165 aa14.44□□□□□ -0.1
PTCH1-213ENST00000546820 DENND4AQ7Z401 1863 aa14.44□□□□□ -0.1
PTCH1-213ENST00000546820 YJEFN3A6XGL0 299 aa14.43□□□□□ -0.1
PTCH1-213ENST00000546820 E7ENQ6 273 aa14.43□□□□□ -0.1
PTCH1-213ENST00000546820 CAPN9O14815 690 aa14.43□□□□□ -0.1
PTCH1-213ENST00000546820 PAPSS1O43252 624 aaPredicted RBP14.43□□□□□ -0.1
PTCH1-213ENST00000546820 COCHO43405 550 aa14.43□□□□□ -0.1
PTCH1-213ENST00000546820 MFAP3LO75121 409 aa14.43□□□□□ -0.1
PTCH1-213ENST00000546820 OAS1P00973 400 aaKnown RBP14.43□□□□□ -0.1
PTCH1-213ENST00000546820 LTFP02788 710 aa14.43□□□□□ -0.1
PTCH1-213ENST00000546820 CALB1P05937 261 aa14.43□□□□□ -0.1
PTCH1-213ENST00000546820 MBL2P11226 248 aaPredicted RBP14.43□□□□□ -0.1
PTCH1-213ENST00000546820 GZMAP12544 262 aa14.43□□□□□ -0.1
PTCH1-213ENST00000546820 UNGP13051 313 aaPredicted RBP14.43□□□□□ -0.1
PTCH1-213ENST00000546820 CDC25BP30305 580 aa14.43□□□□□ -0.1
PTCH1-213ENST00000546820 GABRB2P47870 512 aa14.43□□□□□ -0.1
PTCH1-213ENST00000546820 ADKP55263 362 aaKnown RBP14.43□□□□□ -0.1
PTCH1-213ENST00000546820 YWHAZP63104 245 aaKnown RBP14.43□□□□□ -0.1
PTCH1-213ENST00000546820 SLC7A9P82251 487 aa14.43□□□□□ -0.1
PTCH1-213ENST00000546820 SLC6A3Q01959 620 aa14.43□□□□□ -0.1
PTCH1-213ENST00000546820 GOLGA8FQ08AF8 430 aa14.43□□□□□ -0.1
PTCH1-213ENST00000546820 GOLGA8DPQ0D2H9 430 aa14.43□□□□□ -0.1
PTCH1-213ENST00000546820 HTR4Q13639 388 aa14.43□□□□□ -0.1
PTCH1-213ENST00000546820 ARID5BQ14865 1188 aa14.43□□□□□ -0.1
PTCH1-213ENST00000546820 PTPN20Q4JDL3 420 aa14.43□□□□□ -0.1
PTCH1-213ENST00000546820 C10orf120Q5SQS8 335 aa14.43□□□□□ -0.1
PTCH1-213ENST00000546820 TANGO2Q6ICL3 276 aa14.43□□□□□ -0.1
PTCH1-213ENST00000546820 ACAD10Q6JQN1 1059 aa14.43□□□□□ -0.1
PTCH1-213ENST00000546820 BEND5Q7L4P6 421 aa14.43□□□□□ -0.1
PTCH1-213ENST00000546820 ZNF571Q7Z3V5 609 aaPredicted RBP14.43□□□□□ -0.1
PTCH1-213ENST00000546820 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms