RNA–Protein interactions for RNA: ENST00000546537.6

TMEM116-203, Transcript of transmembrane protein 116, humanhuman

TSL 5

Gene TMEM116, Length 599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-203ENST00000546537 VSTM1Q6UX27 236 aa11.52□□□□□ -0.57
TMEM116-203ENST00000546537 C4orf50Q6ZRC1 276 aa11.52□□□□□ -0.57
TMEM116-203ENST00000546537 OSTM1Q86WC4 334 aa11.52□□□□□ -0.57
TMEM116-203ENST00000546537 FMNL3Q8IVF7 1028 aa11.52□□□□□ -0.57
TMEM116-203ENST00000546537 FGF11Q92914 225 aa11.52□□□□□ -0.57
TMEM116-203ENST00000546537 DUSP9Q99956 384 aaKnown RBP11.52□□□□□ -0.57
TMEM116-203ENST00000546537 RAB34Q9BZG1 259 aa11.52□□□□□ -0.57
TMEM116-203ENST00000546537 SEMA4CQ9C0C4 833 aa11.52□□□□□ -0.57
TMEM116-203ENST00000546537 SPHK2Q9NRA0 654 aa11.52□□□□□ -0.57
TMEM116-203ENST00000546537 IGSF5Q9NSI5 407 aa11.52□□□□□ -0.57
TMEM116-203ENST00000546537 EHD2Q9NZN4 543 aa11.52□□□□□ -0.57
TMEM116-203ENST00000546537 EIF2B4Q9UI10 523 aaKnown RBP11.52□□□□□ -0.57
TMEM116-203ENST00000546537 PCDHB6Q9Y5E3 794 aa11.52□□□□□ -0.57
TMEM116-203ENST00000546537 PCDHGA1Q9Y5H4 931 aa11.52□□□□□ -0.57
TMEM116-203ENST00000546537 PP2D1A8MPX8 630 aa11.51□□□□□ -0.57
TMEM116-203ENST00000546537 KCNJ18B7U540 433 aa11.51□□□□□ -0.57
TMEM116-203ENST00000546537 GABRDO14764 452 aa11.51□□□□□ -0.57
TMEM116-203ENST00000546537 EPB41L2O43491 1005 aaKnown RBP11.51□□□□□ -0.57
TMEM116-203ENST00000546537 HUS1O60921 280 aa11.51□□□□□ -0.57
TMEM116-203ENST00000546537 ABL1P00519 1130 aa11.51□□□□□ -0.57
TMEM116-203ENST00000546537 C6P13671 934 aa11.51□□□□□ -0.57
TMEM116-203ENST00000546537 SCP2P22307 547 aa11.51□□□□□ -0.57
TMEM116-203ENST00000546537 PCSK1P29120 753 aa11.51□□□□□ -0.57
TMEM116-203ENST00000546537 GRIK1P39086 918 aa11.51□□□□□ -0.57
TMEM116-203ENST00000546537 LHX1P48742 406 aa11.51□□□□□ -0.57
TMEM116-203ENST00000546537 CSNK1EP49674 416 aaKnown RBP11.51□□□□□ -0.57
TMEM116-203ENST00000546537 CLDN6P56747 220 aa11.51□□□□□ -0.57
TMEM116-203ENST00000546537 NOP14P78316 857 aaKnown RBP11.51□□□□□ -0.57
TMEM116-203ENST00000546537 POU5F1Q01860 360 aaKnown RBP11.51□□□□□ -0.57
TMEM116-203ENST00000546537 KIF19Q2TAC6 998 aa11.51□□□□□ -0.57
TMEM116-203ENST00000546537 ANO4Q32M45 955 aa11.51□□□□□ -0.57
TMEM116-203ENST00000546537 TTC38Q5R3I4 469 aa11.51□□□□□ -0.57
TMEM116-203ENST00000546537 TMEM25Q86YD3 366 aa11.51□□□□□ -0.57
TMEM116-203ENST00000546537 NT5DC4Q86YG4 428 aa11.51□□□□□ -0.57
TMEM116-203ENST00000546537 SPACA3Q8IXA5 215 aa11.51□□□□□ -0.57
TMEM116-203ENST00000546537 SYT2Q8N9I0 419 aaPredicted RBP11.51□□□□□ -0.57
TMEM116-203ENST00000546537 NSUN7Q8NE18 718 aaKnown RBP11.51□□□□□ -0.57
TMEM116-203ENST00000546537 TMEM176AQ96HP8 235 aa11.51□□□□□ -0.57
TMEM116-203ENST00000546537 ZFRQ96KR1 1074 aaKnown RBP11.51□□□□□ -0.57
TMEM116-203ENST00000546537 MMTAG2Q9BU76 263 aaKnown RBP11.51□□□□□ -0.57
TMEM116-203ENST00000546537 KCND2Q9NZV8 630 aa11.51□□□□□ -0.57
TMEM116-203ENST00000546537 MAGEC2Q9UBF1 373 aaPredicted RBP11.51□□□□□ -0.57
TMEM116-203ENST00000546537 FTSJ1Q9UET6 329 aa11.51□□□□□ -0.57
TMEM116-203ENST00000546537 SNX11Q9Y5W9 270 aa11.51□□□□□ -0.57
TMEM116-203ENST00000546537 PTPN13Q12923 2485 aa11.51□□□□□ -0.57
TMEM116-203ENST00000546537 PIEZO2Q9H5I5 2752 aa11.5□□□□□ -0.57
TMEM116-203ENST00000546537 WASH3PC4AMC7 463 aa11.5□□□□□ -0.57
TMEM116-203ENST00000546537 PRRT4C9JH25 899 aa11.5□□□□□ -0.57
TMEM116-203ENST00000546537 TRIM66O15016 1216 aa11.5□□□□□ -0.57
TMEM116-203ENST00000546537 ATP2C2O75185 946 aa11.5□□□□□ -0.57
TMEM116-203ENST00000546537 CDK4P11802 303 aa11.5□□□□□ -0.57
TMEM116-203ENST00000546537 BDNFP23560 247 aa11.5□□□□□ -0.57
TMEM116-203ENST00000546537 OXTRP30559 389 aa11.5□□□□□ -0.57
TMEM116-203ENST00000546537 POLR2BP30876 1174 aaKnown RBP11.5□□□□□ -0.57
TMEM116-203ENST00000546537 IL12RB1P42701 662 aa11.5□□□□□ -0.57
TMEM116-203ENST00000546537 CCT8P50990 548 aa11.5□□□□□ -0.57
TMEM116-203ENST00000546537 TPMTP51580 245 aa11.5□□□□□ -0.57
TMEM116-203ENST00000546537 AFF3P51826 1226 aaKnown RBP11.5□□□□□ -0.57
TMEM116-203ENST00000546537 SLC12A3P55017 1021 aa11.5□□□□□ -0.57
TMEM116-203ENST00000546537 TAF10Q12962 218 aa11.5□□□□□ -0.57
TMEM116-203ENST00000546537 TARDBPQ13148 414 aaKnown RBP eCLIP11.5□□□□□ -0.574e-9■■■■■ 33.8
TMEM116-203ENST00000546537 FUT11Q495W5 492 aa11.5□□□□□ -0.57
TMEM116-203ENST00000546537 PKDCCQ504Y2 493 aa11.5□□□□□ -0.57
TMEM116-203ENST00000546537 GRAMD4Q6IC98 578 aa11.5□□□□□ -0.57
TMEM116-203ENST00000546537 BBS7Q8IWZ6 715 aa11.5□□□□□ -0.57
TMEM116-203ENST00000546537 ADGRF2Q8IZF7 708 aa11.5□□□□□ -0.57
TMEM116-203ENST00000546537 TOP6BLQ8N6T0 577 aa11.5□□□□□ -0.57
TMEM116-203ENST00000546537 SCFD1Q8WVM8 642 aa11.5□□□□□ -0.57
TMEM116-203ENST00000546537 IGSF8Q969P0 613 aa11.5□□□□□ -0.57
TMEM116-203ENST00000546537 MYLPFQ96A32 169 aa11.5□□□□□ -0.57
TMEM116-203ENST00000546537 MKRN2Q9H000 416 aaKnown RBP11.5□□□□□ -0.57
TMEM116-203ENST00000546537 DNAJC17Q9NVM6 304 aaKnown RBP11.5□□□□□ -0.57
TMEM116-203ENST00000546537 GDAP2Q9NXN4 497 aa11.5□□□□□ -0.57
TMEM116-203ENST00000546537 SH3BP1Q9Y3L3 701 aa11.5□□□□□ -0.57
TMEM116-203ENST00000546537 SLCO1B1Q9Y6L6 691 aa11.5□□□□□ -0.57
TMEM116-203ENST00000546537 KNL1Q8NG31 2342 aa11.5□□□□□ -0.57
TMEM116-203ENST00000546537 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.49□□□□□ -0.57
TMEM116-203ENST00000546537 NPHP3-ACAD11A0A0J9YXS1 232 aa11.49□□□□□ -0.57
TMEM116-203ENST00000546537 ANKRD63C9JTQ0 380 aa11.49□□□□□ -0.57
TMEM116-203ENST00000546537 K7ENM7 598 aa11.49□□□□□ -0.57
TMEM116-203ENST00000546537 PAPSS1O43252 624 aaPredicted RBP11.49□□□□□ -0.57
TMEM116-203ENST00000546537 CACNG3O60359 315 aa11.49□□□□□ -0.57
TMEM116-203ENST00000546537 IGLV3-19P01714 112 aa11.49□□□□□ -0.57
TMEM116-203ENST00000546537 ITGB3P05106 788 aa11.49□□□□□ -0.57
TMEM116-203ENST00000546537 C1SP09871 688 aa11.49□□□□□ -0.57
TMEM116-203ENST00000546537 ANXA13P27216 316 aa11.49□□□□□ -0.57
TMEM116-203ENST00000546537 CCDC173Q0VFZ6 552 aa11.49□□□□□ -0.57
TMEM116-203ENST00000546537 KCNH2Q12809 1159 aa11.49□□□□□ -0.57
TMEM116-203ENST00000546537 LY6DQ14210 128 aa11.49□□□□□ -0.57
TMEM116-203ENST00000546537 INAVAQ3KP66 663 aa11.49□□□□□ -0.57
TMEM116-203ENST00000546537 ARSHQ5FYA8 562 aa11.49□□□□□ -0.57
TMEM116-203ENST00000546537 HYIQ5T013 277 aa11.49□□□□□ -0.57
TMEM116-203ENST00000546537 ADALQ6DHV7 355 aa11.49□□□□□ -0.57
TMEM116-203ENST00000546537 CRELD2Q6UXH1 353 aaPredicted RBP11.49□□□□□ -0.57
TMEM116-203ENST00000546537 ERICH1Q86X53 443 aa11.49□□□□□ -0.57
TMEM116-203ENST00000546537 KCTD17Q8N5Z5 321 aa11.49□□□□□ -0.57
TMEM116-203ENST00000546537 LRRC52Q8N7C0 313 aa11.49□□□□□ -0.57
TMEM116-203ENST00000546537 NECAB1Q8N987 351 aa11.49□□□□□ -0.57
TMEM116-203ENST00000546537 GTF3C6Q969F1 213 aa11.49□□□□□ -0.57
TMEM116-203ENST00000546537 ARID3AQ99856 593 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms