RNA–Protein interactions for RNA: ENST00000546164.5

YBX3-217, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 805 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-217ENST00000546164 TUBGCP2Q9BSJ2 902 aa12.51□□□□□ -0.41
YBX3-217ENST00000546164 CRACR2AQ9BSW2 395 aa12.51□□□□□ -0.41
YBX3-217ENST00000546164 IER2Q9BTL4 223 aa12.51□□□□□ -0.41
YBX3-217ENST00000546164 NDST4Q9H3R1 872 aa12.51□□□□□ -0.41
YBX3-217ENST00000546164 EBF3Q9H4W6 596 aa12.51□□□□□ -0.41
YBX3-217ENST00000546164 CCSER2Q9H7U1 834 aa12.51□□□□□ -0.41
YBX3-217ENST00000546164 NMUR1Q9HB89 426 aa12.51□□□□□ -0.41
YBX3-217ENST00000546164 UBE2TQ9NPD8 197 aaPredicted RBP12.51□□□□□ -0.41
YBX3-217ENST00000546164 SAMSN1Q9NSI8 373 aaKnown RBP12.51□□□□□ -0.41
YBX3-217ENST00000546164 DUS2Q9NX74 493 aaKnown RBP12.51□□□□□ -0.41
YBX3-217ENST00000546164 CLIC5Q9NZA1 410 aa12.51□□□□□ -0.41
YBX3-217ENST00000546164 HESX1Q9UBX0 185 aa12.51□□□□□ -0.41
YBX3-217ENST00000546164 APEX2Q9UBZ4 518 aa12.51□□□□□ -0.41
YBX3-217ENST00000546164 NFE2L3Q9Y4A8 694 aa12.51□□□□□ -0.41
YBX3-217ENST00000546164 TICRRQ7Z2Z1 1910 aa12.5□□□□□ -0.41
YBX3-217ENST00000546164 OTOL1A6NHN0 477 aaPredicted RBP12.5□□□□□ -0.41
YBX3-217ENST00000546164 KCNJ18B7U540 433 aa12.5□□□□□ -0.41
YBX3-217ENST00000546164 SLC9A3R1O14745 358 aaPredicted RBP12.5□□□□□ -0.41
YBX3-217ENST00000546164 MBL2P11226 248 aaPredicted RBP12.5□□□□□ -0.41
YBX3-217ENST00000546164 CHRNB1P11230 501 aa12.5□□□□□ -0.41
YBX3-217ENST00000546164 ARSAP15289 507 aa12.5□□□□□ -0.41
YBX3-217ENST00000546164 SLC9A1P19634 815 aa12.5□□□□□ -0.41
YBX3-217ENST00000546164 SOX9P48436 509 aa12.5□□□□□ -0.41
YBX3-217ENST00000546164 IFNAR2P48551 515 aa12.5□□□□□ -0.41
YBX3-217ENST00000546164 MFAP3P55082 362 aa12.5□□□□□ -0.41
YBX3-217ENST00000546164 AMPD2Q01433 879 aa12.5□□□□□ -0.41
YBX3-217ENST00000546164 KCNJ12Q14500 433 aa12.5□□□□□ -0.41
YBX3-217ENST00000546164 STX1AQ16623 288 aa12.5□□□□□ -0.41
YBX3-217ENST00000546164 MEA1Q16626 185 aa12.5□□□□□ -0.41
YBX3-217ENST00000546164 TCP11X2Q5H9J9 407 aa12.5□□□□□ -0.41
YBX3-217ENST00000546164 CDKAL1Q5VV42 579 aa12.5□□□□□ -0.41
YBX3-217ENST00000546164 PM20D1Q6GTS8 502 aa12.5□□□□□ -0.41
YBX3-217ENST00000546164 TXNDC11Q6PKC3 985 aa12.5□□□□□ -0.41
YBX3-217ENST00000546164 SCD5Q86SK9 330 aa12.5□□□□□ -0.41
YBX3-217ENST00000546164 CPA6Q8N4T0 437 aa12.5□□□□□ -0.41
YBX3-217ENST00000546164 KCTD13Q8WZ19 329 aa12.5□□□□□ -0.41
YBX3-217ENST00000546164 ATP2A3Q93084 1043 aa12.5□□□□□ -0.41
YBX3-217ENST00000546164 CHFRQ96EP1 664 aa12.5□□□□□ -0.41
YBX3-217ENST00000546164 ZSWIM1Q9BR11 485 aa12.5□□□□□ -0.41
YBX3-217ENST00000546164 CHRDQ9H2X0 955 aa12.5□□□□□ -0.41
YBX3-217ENST00000546164 ECT2Q9H8V3 914 aa12.5□□□□□ -0.41
YBX3-217ENST00000546164 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.5□□□□□ -0.41
YBX3-217ENST00000546164 OSER1Q9NX31 292 aa12.5□□□□□ -0.41
YBX3-217ENST00000546164 SMPD4Q9NXE4 827 aa12.5□□□□□ -0.41
YBX3-217ENST00000546164 TMEM63CQ9P1W3 806 aa12.5□□□□□ -0.41
YBX3-217ENST00000546164 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.5□□□□□ -0.41
YBX3-217ENST00000546164 WNT6Q9Y6F9 365 aa12.5□□□□□ -0.41
YBX3-217ENST00000546164 VPS13AQ96RL7 3174 aa12.49□□□□□ -0.41
YBX3-217ENST00000546164 A0A1W2PQH9 124 aa12.49□□□□□ -0.41
YBX3-217ENST00000546164 E2F8A0AVK6 867 aa12.49□□□□□ -0.41
YBX3-217ENST00000546164 TULP2O00295 520 aa12.49□□□□□ -0.41
YBX3-217ENST00000546164 TRDMT1O14717 391 aaKnown RBP12.49□□□□□ -0.41
YBX3-217ENST00000546164 NFATC1O95644 943 aa12.49□□□□□ -0.41
YBX3-217ENST00000546164 TKTL1P51854 596 aa12.49□□□□□ -0.41
YBX3-217ENST00000546164 LRRC32Q14392 662 aa12.49□□□□□ -0.41
YBX3-217ENST00000546164 ANGPT1Q15389 498 aa12.49□□□□□ -0.41
YBX3-217ENST00000546164 DPY19L2P1Q6NXN4 242 aa12.49□□□□□ -0.41
YBX3-217ENST00000546164 C1orf210Q8IVY1 113 aa12.49□□□□□ -0.41
YBX3-217ENST00000546164 SCML4Q8N228 414 aa12.49□□□□□ -0.41
YBX3-217ENST00000546164 ARHGAP18Q8N392 663 aa12.49□□□□□ -0.41
YBX3-217ENST00000546164 SLC35F5Q8WV83 523 aa12.49□□□□□ -0.41
YBX3-217ENST00000546164 SHC3Q92529 594 aa12.49□□□□□ -0.41
YBX3-217ENST00000546164 FAM122AQ96E09 287 aa12.49□□□□□ -0.41
YBX3-217ENST00000546164 CDK5RAP1Q96SZ6 601 aaKnown RBP12.49□□□□□ -0.41
YBX3-217ENST00000546164 SIX2Q9NPC8 291 aa12.49□□□□□ -0.41
YBX3-217ENST00000546164 CFAP97Q9P2B7 532 aa12.49□□□□□ -0.41
YBX3-217ENST00000546164 TBC1D14Q9P2M4 693 aa12.49□□□□□ -0.41
YBX3-217ENST00000546164 NDRG2Q9UN36 371 aaKnown RBP12.49□□□□□ -0.41
YBX3-217ENST00000546164 CACNA1IQ9P0X4 2223 aa12.49□□□□□ -0.41
YBX3-217ENST00000546164 MYH10P35580 1976 aa12.49□□□□□ -0.41
YBX3-217ENST00000546164 H0Y858 1186 aa12.48□□□□□ -0.41
YBX3-217ENST00000546164 TBX18O95935 607 aa12.48□□□□□ -0.41
YBX3-217ENST00000546164 ZBED1O96006 694 aa12.48□□□□□ -0.41
YBX3-217ENST00000546164 RARGP13631 454 aa12.48□□□□□ -0.41
YBX3-217ENST00000546164 KRT5P13647 590 aa12.48□□□□□ -0.41
YBX3-217ENST00000546164 BRD2P25440 801 aaKnown RBP12.48□□□□□ -0.41
YBX3-217ENST00000546164 GJA4P35212 333 aa12.48□□□□□ -0.41
YBX3-217ENST00000546164 ATP5C1P36542 298 aaKnown RBP12.48□□□□□ -0.41
YBX3-217ENST00000546164 NR1H3Q13133 447 aa12.48□□□□□ -0.41
YBX3-217ENST00000546164 CCINQ13939 588 aa12.48□□□□□ -0.41
YBX3-217ENST00000546164 HSP90AA4PQ58FG1 418 aa12.48□□□□□ -0.41
YBX3-217ENST00000546164 TMEM196Q5HYL7 178 aa12.48□□□□□ -0.41
YBX3-217ENST00000546164 DGKKQ5KSL6 1271 aa12.48□□□□□ -0.41
YBX3-217ENST00000546164 GJB7Q6PEY0 223 aa12.48□□□□□ -0.41
YBX3-217ENST00000546164 C11orf57Q6ZUT1 292 aaPredicted RBP12.48□□□□□ -0.41
YBX3-217ENST00000546164 BHLHA9Q7RTU4 235 aa12.48□□□□□ -0.41
YBX3-217ENST00000546164 TADA2BQ86TJ2 420 aa12.48□□□□□ -0.41
YBX3-217ENST00000546164 ADGRG2Q8IZP9 1017 aa12.48□□□□□ -0.41
YBX3-217ENST00000546164 SYNPOQ8N3V7 929 aa12.48□□□□□ -0.41
YBX3-217ENST00000546164 TTC8Q8TAM2 541 aa12.48□□□□□ -0.41
YBX3-217ENST00000546164 UBA3Q8TBC4 463 aa12.48□□□□□ -0.41
YBX3-217ENST00000546164 OTUB2Q96DC9 234 aa12.48□□□□□ -0.41
YBX3-217ENST00000546164 HSFY1Q96LI6 401 aa12.48□□□□□ -0.41
YBX3-217ENST00000546164 KLF16Q9BXK1 252 aaPredicted RBP12.48□□□□□ -0.41
YBX3-217ENST00000546164 NACA2Q9H009 215 aa12.48□□□□□ -0.41
YBX3-217ENST00000546164 LINC00597Q9H2U6 94 aa12.48□□□□□ -0.41
YBX3-217ENST00000546164 LMAN1LQ9HAT1 526 aa12.48□□□□□ -0.41
YBX3-217ENST00000546164 LRRC4Q9HBW1 653 aa12.48□□□□□ -0.41
YBX3-217ENST00000546164 CNGB3Q9NQW8 809 aa12.48□□□□□ -0.41
YBX3-217ENST00000546164 DNMT3LQ9UJW3 386 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms