RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 APOC2P02655 101 aa6.75□□□□□ -1.33
SNHG1-225ENST00000545920 MT-ND3P03897 115 aa6.75□□□□□ -1.33
SNHG1-225ENST00000545920 T-ENOLP0DO92 83 aa6.75□□□□□ -1.33
SNHG1-225ENST00000545920 CETPP11597 493 aa6.75□□□□□ -1.33
SNHG1-225ENST00000545920 CREB1P16220 341 aa6.75□□□□□ -1.33
SNHG1-225ENST00000545920 DESP17661 470 aa6.75□□□□□ -1.33
SNHG1-225ENST00000545920 TNNI1P19237 187 aa6.75□□□□□ -1.33
SNHG1-225ENST00000545920 PCK1P35558 622 aa6.75□□□□□ -1.33
SNHG1-225ENST00000545920 MAGEA6P43360 314 aa6.75□□□□□ -1.33
SNHG1-225ENST00000545920 SERPINB9P50453 376 aa6.75□□□□□ -1.33
SNHG1-225ENST00000545920 ARFIP2P53365 341 aa6.75□□□□□ -1.33
SNHG1-225ENST00000545920 TAS2R40P59535 323 aa6.75□□□□□ -1.33
SNHG1-225ENST00000545920 NOP14P78316 857 aaKnown RBP6.75□□□□□ -1.33
SNHG1-225ENST00000545920 JAG1P78504 1218 aa6.75□□□□□ -1.33
SNHG1-225ENST00000545920 SLC34A1Q06495 639 aa6.75□□□□□ -1.33
SNHG1-225ENST00000545920 PDIA2Q13087 525 aaKnown RBP6.75□□□□□ -1.33
SNHG1-225ENST00000545920 NAB1Q13506 487 aa6.75□□□□□ -1.33
SNHG1-225ENST00000545920 TNFAIP1Q13829 316 aa6.75□□□□□ -1.33
SNHG1-225ENST00000545920 RBBP5Q15291 538 aaKnown RBP6.75□□□□□ -1.33
SNHG1-225ENST00000545920 CCDC6Q16204 474 aa6.75□□□□□ -1.33
SNHG1-225ENST00000545920 PKN2Q16513 984 aaKnown RBP6.75□□□□□ -1.33
SNHG1-225ENST00000545920 C4orf17Q53FE4 359 aa6.75□□□□□ -1.33
SNHG1-225ENST00000545920 GNASQ5JWF2 1037 aa6.75□□□□□ -1.33
SNHG1-225ENST00000545920 ARHGEF16Q5VV41 709 aa6.75□□□□□ -1.33
SNHG1-225ENST00000545920 TDRD10Q5VZ19 366 aaKnown RBP6.75□□□□□ -1.33
SNHG1-225ENST00000545920 AAGABQ6PD74 315 aa6.75□□□□□ -1.33
SNHG1-225ENST00000545920 DCUN1D2Q6PH85 259 aa6.75□□□□□ -1.33
SNHG1-225ENST00000545920 LVRNQ6Q4G3 990 aa6.75□□□□□ -1.33
SNHG1-225ENST00000545920 FAM47EQ6ZV65 393 aa6.75□□□□□ -1.33
SNHG1-225ENST00000545920 ANO5Q75V66 913 aa6.75□□□□□ -1.33
SNHG1-225ENST00000545920 ARCQ7LC44 396 aa6.75□□□□□ -1.33
SNHG1-225ENST00000545920 OTOAQ7RTW8 1153 aa6.75□□□□□ -1.33
SNHG1-225ENST00000545920 SLC51AQ86UW1 340 aa6.75□□□□□ -1.33
SNHG1-225ENST00000545920 TMPRSS6Q8IU80 811 aa6.75□□□□□ -1.33
SNHG1-225ENST00000545920 BRSK2Q8IWQ3 736 aa6.75□□□□□ -1.33
SNHG1-225ENST00000545920 PALM2Q8IXS6 379 aa6.75□□□□□ -1.33
SNHG1-225ENST00000545920 ZBED8Q8IZ13 594 aa6.75□□□□□ -1.33
SNHG1-225ENST00000545920 RTKN2Q8IZC4 609 aa6.75□□□□□ -1.33
SNHG1-225ENST00000545920 KIF2BQ8N4N8 673 aa6.75□□□□□ -1.33
SNHG1-225ENST00000545920 MEIOBQ8N635 442 aa6.75□□□□□ -1.33
SNHG1-225ENST00000545920 NAT8LQ8N9F0 302 aa6.75□□□□□ -1.33
SNHG1-225ENST00000545920 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.75□□□□□ -1.33
SNHG1-225ENST00000545920 CCDC110Q8TBZ0 833 aa6.75□□□□□ -1.33
SNHG1-225ENST00000545920 NSUN6Q8TEA1 469 aaKnown RBP6.75□□□□□ -1.33
SNHG1-225ENST00000545920 AFG1LQ8WV93 481 aa6.75□□□□□ -1.33
SNHG1-225ENST00000545920 SLC44A1Q8WWI5 657 aa6.75□□□□□ -1.33
SNHG1-225ENST00000545920 RSAD2Q8WXG1 361 aa6.75□□□□□ -1.33
SNHG1-225ENST00000545920 STMN2Q93045 179 aa6.75□□□□□ -1.33
SNHG1-225ENST00000545920 PTCD3Q96EY7 689 aaKnown RBP6.75□□□□□ -1.33
SNHG1-225ENST00000545920 RMDN3Q96TC7 470 aa6.75□□□□□ -1.33
SNHG1-225ENST00000545920 GMLQ99445 158 aa6.75□□□□□ -1.33
SNHG1-225ENST00000545920 POP1Q99575 1024 aaKnown RBP6.75□□□□□ -1.33
SNHG1-225ENST00000545920 PAIP2Q9BPZ3 127 aaKnown RBP6.75□□□□□ -1.33
SNHG1-225ENST00000545920 C11orf70Q9BRQ4 267 aa6.75□□□□□ -1.33
SNHG1-225ENST00000545920 FAM213AQ9BRX8 229 aa6.75□□□□□ -1.33
SNHG1-225ENST00000545920 TSSK1BQ9BXA7 367 aa6.75□□□□□ -1.33
SNHG1-225ENST00000545920 OSBPL1AQ9BXW6 950 aa6.75□□□□□ -1.33
SNHG1-225ENST00000545920 PORCNQ9H237 461 aa6.75□□□□□ -1.33
SNHG1-225ENST00000545920 C1orf21Q9H246 121 aa6.75□□□□□ -1.33
SNHG1-225ENST00000545920 RSAD1Q9HA92 442 aa6.75□□□□□ -1.33
SNHG1-225ENST00000545920 IFT122Q9HBG6 1241 aa6.75□□□□□ -1.33
SNHG1-225ENST00000545920 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.75□□□□□ -1.33
SNHG1-225ENST00000545920 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.75□□□□□ -1.33
SNHG1-225ENST00000545920 TBK1Q9UHD2 729 aa6.75□□□□□ -1.33
SNHG1-225ENST00000545920 SCOCQ9UIL1 159 aa6.75□□□□□ -1.33
SNHG1-225ENST00000545920 DNPEPQ9ULA0 475 aa6.75□□□□□ -1.33
SNHG1-225ENST00000545920 SLX4Q8IY92 1834 aa6.75□□□□□ -1.33
SNHG1-225ENST00000545920 MAGEA13PA6NCF6 341 aa6.74□□□□□ -1.33
SNHG1-225ENST00000545920 TISP43B9A030 160 aa6.74□□□□□ -1.33
SNHG1-225ENST00000545920 POC1B-GALNT4F8VUJ3 575 aa6.74□□□□□ -1.33
SNHG1-225ENST00000545920 SGK1O00141 431 aa6.74□□□□□ -1.33
SNHG1-225ENST00000545920 DDX39AO00148 427 aaKnown RBP6.74□□□□□ -1.33
SNHG1-225ENST00000545920 MCF2LO15068 1137 aa6.74□□□□□ -1.33
SNHG1-225ENST00000545920 GYG2O15488 501 aa6.74□□□□□ -1.33
SNHG1-225ENST00000545920 GSC2O15499 205 aa6.74□□□□□ -1.33
SNHG1-225ENST00000545920 MAN1A2O60476 641 aa6.74□□□□□ -1.33
SNHG1-225ENST00000545920 CPNE3O75131 537 aaKnown RBP6.74□□□□□ -1.33
SNHG1-225ENST00000545920 CIB2O75838 187 aa6.74□□□□□ -1.33
SNHG1-225ENST00000545920 STK10O94804 968 aaKnown RBP6.74□□□□□ -1.33
SNHG1-225ENST00000545920 CCNE2O96020 404 aa6.74□□□□□ -1.33
SNHG1-225ENST00000545920 INHBAP08476 426 aa6.74□□□□□ -1.33
SNHG1-225ENST00000545920 RARBP10826 455 aa6.74□□□□□ -1.33
SNHG1-225ENST00000545920 KRT4P19013 534 aa6.74□□□□□ -1.33
SNHG1-225ENST00000545920 GLRA2P23416 452 aa6.74□□□□□ -1.33
SNHG1-225ENST00000545920 PAX7P23759 505 aa6.74□□□□□ -1.33
SNHG1-225ENST00000545920 TARSP26639 723 aaKnown RBP6.74□□□□□ -1.33
SNHG1-225ENST00000545920 ICAM3P32942 547 aa6.74□□□□□ -1.33
SNHG1-225ENST00000545920 RPA3P35244 121 aaPredicted RBP6.74□□□□□ -1.33
SNHG1-225ENST00000545920 PTDSS1P48651 473 aaKnown RBP6.74□□□□□ -1.33
SNHG1-225ENST00000545920 CTCFP49711 727 aaPredicted RBP6.74□□□□□ -1.33
SNHG1-225ENST00000545920 NEK3P51956 506 aa6.74□□□□□ -1.33
SNHG1-225ENST00000545920 CACNB3P54284 484 aa6.74□□□□□ -1.33
SNHG1-225ENST00000545920 SNX16P57768 344 aa6.74□□□□□ -1.33
SNHG1-225ENST00000545920 ZNF200P98182 395 aaPredicted RBP6.74□□□□□ -1.33
SNHG1-225ENST00000545920 ROR2Q01974 943 aaKnown RBP6.74□□□□□ -1.33
SNHG1-225ENST00000545920 CNTN2Q02246 1040 aa6.74□□□□□ -1.33
SNHG1-225ENST00000545920 ZBTB16Q05516 673 aa6.74□□□□□ -1.33
SNHG1-225ENST00000545920 AP1B1Q10567 949 aa6.74□□□□□ -1.33
SNHG1-225ENST00000545920 DYNC1I2Q13409 638 aaKnown RBP6.74□□□□□ -1.33
SNHG1-225ENST00000545920 PRKD1Q15139 912 aaPredicted RBP6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms