RNA–Protein interactions for RNA: ENST00000544913.2

HMGCS2-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

TSL 2 BASIC

Gene HMGCS2, Length 1,925 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-204ENST00000544913 TRIM11Q96F44 468 aa7.35□□□□□ -1.23
HMGCS2-204ENST00000544913 SMARCD1Q96GM5 515 aa7.35□□□□□ -1.23
HMGCS2-204ENST00000544913 MS4A14Q96JA4 679 aa7.35□□□□□ -1.23
HMGCS2-204ENST00000544913 PSMB7Q99436 277 aa7.35□□□□□ -1.23
HMGCS2-204ENST00000544913 LBHD1Q9BQE6 289 aaPredicted RBP7.35□□□□□ -1.23
HMGCS2-204ENST00000544913 C17orf80Q9BSJ5 609 aa7.35□□□□□ -1.23
HMGCS2-204ENST00000544913 FAM129AQ9BZQ8 928 aa7.35□□□□□ -1.23
HMGCS2-204ENST00000544913 RAB17Q9H0T7 212 aa7.35□□□□□ -1.23
HMGCS2-204ENST00000544913 EPB41L5Q9HCM4 733 aa7.35□□□□□ -1.23
HMGCS2-204ENST00000544913 ST7Q9NRC1 585 aa7.35□□□□□ -1.23
HMGCS2-204ENST00000544913 FAM114A2Q9NRY5 505 aa7.35□□□□□ -1.23
HMGCS2-204ENST00000544913 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.35□□□□□ -1.23
HMGCS2-204ENST00000544913 CTTNBP2NLQ9P2B4 639 aa7.35□□□□□ -1.23
HMGCS2-204ENST00000544913 PACSIN2Q9UNF0 486 aaPredicted RBP7.35□□□□□ -1.23
HMGCS2-204ENST00000544913 CDY1Q9Y6F8 540 aa7.35□□□□□ -1.23
HMGCS2-204ENST00000544913 USP3Q9Y6I4 520 aa7.35□□□□□ -1.23
HMGCS2-204ENST00000544913 C2CD4BA6NLJ0 364 aa7.34□□□□□ -1.23
HMGCS2-204ENST00000544913 H0YGN5 161 aa7.34□□□□□ -1.23
HMGCS2-204ENST00000544913 GOLGA8SH3BPF8 625 aa7.34□□□□□ -1.23
HMGCS2-204ENST00000544913 KRIT1O00522 736 aa7.34□□□□□ -1.23
HMGCS2-204ENST00000544913 TLL1O43897 1013 aa7.34□□□□□ -1.23
HMGCS2-204ENST00000544913 RNF40O75150 1001 aa7.34□□□□□ -1.23
HMGCS2-204ENST00000544913 SOAT2O75908 522 aa7.34□□□□□ -1.23
HMGCS2-204ENST00000544913 ABLIM3O94929 683 aa7.34□□□□□ -1.23
HMGCS2-204ENST00000544913 SEC24AO95486 1093 aa7.34□□□□□ -1.23
HMGCS2-204ENST00000544913 ATF6P18850 670 aa7.34□□□□□ -1.23
HMGCS2-204ENST00000544913 TFE3P19532 575 aaPredicted RBP7.34□□□□□ -1.23
HMGCS2-204ENST00000544913 COMTP21964 271 aa7.34□□□□□ -1.23
HMGCS2-204ENST00000544913 ACTN2P35609 894 aa7.34□□□□□ -1.23
HMGCS2-204ENST00000544913 PPM1AP35813 382 aa7.34□□□□□ -1.23
HMGCS2-204ENST00000544913 BMPR1AP36894 532 aa7.34□□□□□ -1.23
HMGCS2-204ENST00000544913 SCNN1AP37088 669 aa7.34□□□□□ -1.23
HMGCS2-204ENST00000544913 PBX2P40425 430 aa7.34□□□□□ -1.23
HMGCS2-204ENST00000544913 MAGEA11P43364 429 aa7.34□□□□□ -1.23
HMGCS2-204ENST00000544913 GLUD2P49448 558 aa7.34□□□□□ -1.23
HMGCS2-204ENST00000544913 DRG2P55039 364 aaKnown RBP7.34□□□□□ -1.23
HMGCS2-204ENST00000544913 PITX1P78337 314 aaPredicted RBP7.34□□□□□ -1.23
HMGCS2-204ENST00000544913 TSPY1Q01534 308 aa7.34□□□□□ -1.23
HMGCS2-204ENST00000544913 GUCY2DQ02846 1103 aa7.34□□□□□ -1.23
HMGCS2-204ENST00000544913 ADIGQ0VDE8 80 aa7.34□□□□□ -1.23
HMGCS2-204ENST00000544913 MAPRE1Q15691 268 aaKnown RBP7.34□□□□□ -1.23
HMGCS2-204ENST00000544913 CFAP58Q5T655 872 aa7.34□□□□□ -1.23
HMGCS2-204ENST00000544913 SCUBE3Q8IX30 993 aa7.34□□□□□ -1.23
HMGCS2-204ENST00000544913 GPR65Q8IYL9 337 aa7.34□□□□□ -1.23
HMGCS2-204ENST00000544913 TNS4Q8IZW8 715 aa7.34□□□□□ -1.23
HMGCS2-204ENST00000544913 VPS52Q8N1B4 723 aa7.34□□□□□ -1.23
HMGCS2-204ENST00000544913 THEM5Q8N1Q8 247 aa7.34□□□□□ -1.23
HMGCS2-204ENST00000544913 EMC1Q8N766 993 aa7.34□□□□□ -1.23
HMGCS2-204ENST00000544913 NIPA2Q8N8Q9 360 aa7.34□□□□□ -1.23
HMGCS2-204ENST00000544913 FBXO22Q8NEZ5 403 aa7.34□□□□□ -1.23
HMGCS2-204ENST00000544913 SCAMP5Q8TAC9 235 aa7.34□□□□□ -1.23
HMGCS2-204ENST00000544913 FAM76AQ8TAV0 307 aa7.34□□□□□ -1.23
HMGCS2-204ENST00000544913 FEZF2Q8TBJ5 459 aa7.34□□□□□ -1.23
HMGCS2-204ENST00000544913 TMEM169Q96HH4 297 aa7.34□□□□□ -1.23
HMGCS2-204ENST00000544913 FUBP3Q96I24 572 aaKnown RBP eCLIP7.34□□□□□ -1.23
HMGCS2-204ENST00000544913 PGLYRP2Q96PD5 576 aa7.34□□□□□ -1.23
HMGCS2-204ENST00000544913 MCEEQ96PE7 176 aa7.34□□□□□ -1.23
HMGCS2-204ENST00000544913 KRT12Q99456 494 aa7.34□□□□□ -1.23
HMGCS2-204ENST00000544913 SH3GL2Q99962 352 aa7.34□□□□□ -1.23
HMGCS2-204ENST00000544913 RXFP1Q9HBX9 757 aa7.34□□□□□ -1.23
HMGCS2-204ENST00000544913 PNPLA8Q9NP80 782 aa7.34□□□□□ -1.23
HMGCS2-204ENST00000544913 DMAP1Q9NPF5 467 aaPredicted RBP7.34□□□□□ -1.23
HMGCS2-204ENST00000544913 METTL5Q9NRN9 209 aaKnown RBP7.34□□□□□ -1.23
HMGCS2-204ENST00000544913 PARVAQ9NVD7 372 aa7.34□□□□□ -1.23
HMGCS2-204ENST00000544913 IL37Q9NZH6 218 aa7.34□□□□□ -1.23
HMGCS2-204ENST00000544913 HESX1Q9UBX0 185 aa7.34□□□□□ -1.23
HMGCS2-204ENST00000544913 LCMT1Q9UIC8 334 aa7.34□□□□□ -1.23
HMGCS2-204ENST00000544913 ANAPC7Q9UJX3 599 aa7.34□□□□□ -1.23
HMGCS2-204ENST00000544913 UTP11Q9Y3A2 253 aaKnown RBP7.34□□□□□ -1.23
HMGCS2-204ENST00000544913 CEP83Q9Y592 693 aa7.34□□□□□ -1.23
HMGCS2-204ENST00000544913 ALG6Q9Y672 507 aa7.34□□□□□ -1.23
HMGCS2-204ENST00000544913 FAM92AA1XBS5 289 aa7.33□□□□□ -1.24
HMGCS2-204ENST00000544913 FAM187AA6NFU0 413 aa7.33□□□□□ -1.24
HMGCS2-204ENST00000544913 DPYSL4O14531 572 aa7.33□□□□□ -1.24
HMGCS2-204ENST00000544913 FSCN2O14926 492 aa7.33□□□□□ -1.24
HMGCS2-204ENST00000544913 TEX28O15482 410 aa7.33□□□□□ -1.24
HMGCS2-204ENST00000544913 SART1O43290 800 aaKnown RBP7.33□□□□□ -1.24
HMGCS2-204ENST00000544913 PROSCO94903 275 aa7.33□□□□□ -1.24
HMGCS2-204ENST00000544913 CA3P07451 260 aa7.33□□□□□ -1.24
HMGCS2-204ENST00000544913 GLI1P08151 1106 aa7.33□□□□□ -1.24
HMGCS2-204ENST00000544913 CTSAP10619 480 aa7.33□□□□□ -1.24
HMGCS2-204ENST00000544913 HAPLN1P10915 354 aaPredicted RBP7.33□□□□□ -1.24
HMGCS2-204ENST00000544913 MAN1A1P33908 653 aa7.33□□□□□ -1.24
HMGCS2-204ENST00000544913 OR1D2P34982 312 aa7.33□□□□□ -1.24
HMGCS2-204ENST00000544913 GGCXP38435 758 aa7.33□□□□□ -1.24
HMGCS2-204ENST00000544913 PEX5P50542 639 aa7.33□□□□□ -1.24
HMGCS2-204ENST00000544913 DAOAP59103 153 aa7.33□□□□□ -1.24
HMGCS2-204ENST00000544913 TAS2R40P59535 323 aa7.33□□□□□ -1.24
HMGCS2-204ENST00000544913 ERVFC1P60507 584 aa7.33□□□□□ -1.24
HMGCS2-204ENST00000544913 USP46P62068 366 aa7.33□□□□□ -1.24
HMGCS2-204ENST00000544913 SLC7A5Q01650 507 aa7.33□□□□□ -1.24
HMGCS2-204ENST00000544913 SLC6A3Q01959 620 aa7.33□□□□□ -1.24
HMGCS2-204ENST00000544913 TAP1Q03518 808 aa7.33□□□□□ -1.24
HMGCS2-204ENST00000544913 DHX34Q14147 1143 aaKnown RBP7.33□□□□□ -1.24
HMGCS2-204ENST00000544913 SH3PXD2AQ5TCZ1 1133 aa7.33□□□□□ -1.24
HMGCS2-204ENST00000544913 SDHAF4Q5VUM1 108 aa7.33□□□□□ -1.24
HMGCS2-204ENST00000544913 TXNRD3NBQ6F5E7 133 aa7.33□□□□□ -1.24
HMGCS2-204ENST00000544913 PM20D1Q6GTS8 502 aa7.33□□□□□ -1.24
HMGCS2-204ENST00000544913 DNAJC24Q6P3W2 148 aa7.33□□□□□ -1.24
HMGCS2-204ENST00000544913 LRIG3Q6UXM1 1119 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms