RNA–Protein interactions for RNA: ENST00000544805.1

RNF10-222, Transcript of ring finger protein 10, human

TSL 2

Gene RNF10, Length 536 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF10-222	ENST00000544805	MAP3K7CL	P57077	242 aa		9.37	□□□□□ -0.91
RNF10-222	ENST00000544805	VBP1	P61758	197 aa		9.37	□□□□□ -0.91
RNF10-222	ENST00000544805	SPAG1	Q07617	926 aa		9.37	□□□□□ -0.91
RNF10-222	ENST00000544805	FOXC1	Q12948	553 aa		9.37	□□□□□ -0.91
RNF10-222	ENST00000544805	DSC3	Q14574	896 aa		9.37	□□□□□ -0.91
RNF10-222	ENST00000544805	NTRK3	Q16288	839 aa		9.37	□□□□□ -0.91
RNF10-222	ENST00000544805	ERCC6L	Q2NKX8	1250 aa		9.37	□□□□□ -0.91
RNF10-222	ENST00000544805	PRR16	Q569H4	304 aa		9.37	□□□□□ -0.91
RNF10-222	ENST00000544805	C9orf50	Q5SZB4	431 aa		9.37	□□□□□ -0.91
RNF10-222	ENST00000544805	FAM160B1	Q5W0V3	765 aa		9.37	□□□□□ -0.91
RNF10-222	ENST00000544805	GDF6	Q6KF10	455 aa	Predicted RBP	9.37	□□□□□ -0.91
RNF10-222	ENST00000544805	ZNF365	Q70YC5	407 aa		9.37	□□□□□ -0.91
RNF10-222	ENST00000544805	OTOP2	Q7RTS6	562 aa		9.37	□□□□□ -0.91
RNF10-222	ENST00000544805	PASD1	Q8IV76	773 aa		9.37	□□□□□ -0.91
RNF10-222	ENST00000544805	BLID	Q8IZY5	108 aa		9.37	□□□□□ -0.91
RNF10-222	ENST00000544805	CEP70	Q8NHQ1	597 aa		9.37	□□□□□ -0.91
RNF10-222	ENST00000544805	RASGRP4	Q8TDF6	673 aa		9.37	□□□□□ -0.91
RNF10-222	ENST00000544805	LMBR1	Q8WVP7	490 aa		9.37	□□□□□ -0.91
RNF10-222	ENST00000544805	EFHD2	Q96C19	240 aa	Predicted RBP	9.37	□□□□□ -0.91
RNF10-222	ENST00000544805	TIFA	Q96CG3	184 aa		9.37	□□□□□ -0.91
RNF10-222	ENST00000544805	SCLY	Q96I15	445 aa		9.37	□□□□□ -0.91
RNF10-222	ENST00000544805	BARD1	Q99728	777 aa	Known RBP	9.37	□□□□□ -0.91
RNF10-222	ENST00000544805	GPATCH1	Q9BRR8	931 aa	Known RBP	9.37	□□□□□ -0.91
RNF10-222	ENST00000544805	NOC4L	Q9BVI4	516 aa	Known RBP	9.37	□□□□□ -0.91
RNF10-222	ENST00000544805	PRO3102	Q9H379	93 aa		9.37	□□□□□ -0.91
RNF10-222	ENST00000544805	BCAS3	Q9H6U6	928 aa		9.37	□□□□□ -0.91
RNF10-222	ENST00000544805	HPS4	Q9NQG7	708 aa		9.37	□□□□□ -0.91
RNF10-222	ENST00000544805	C8orf4	Q9NR00	106 aa		9.37	□□□□□ -0.91
RNF10-222	ENST00000544805	POLE3	Q9NRF9	147 aa		9.37	□□□□□ -0.91
RNF10-222	ENST00000544805	KCNH7	Q9NS40	1196 aa		9.37	□□□□□ -0.91
RNF10-222	ENST00000544805	FASTKD2	Q9NYY8	710 aa	Known RBP eCLIP	9.37	□□□□□ -0.91
RNF10-222	ENST00000544805	ERAP1	Q9NZ08	941 aa		9.37	□□□□□ -0.91
RNF10-222	ENST00000544805	EHD3	Q9NZN3	535 aa		9.37	□□□□□ -0.91
RNF10-222	ENST00000544805	TRPM5	Q9NZQ8	1165 aa		9.37	□□□□□ -0.91
RNF10-222	ENST00000544805	ORC3	Q9UBD5	711 aa	Predicted RBP	9.37	□□□□□ -0.91
RNF10-222	ENST00000544805	PCDHA4	Q9UN74	947 aa		9.37	□□□□□ -0.91
RNF10-222	ENST00000544805	CBY1	Q9Y3M2	126 aa		9.37	□□□□□ -0.91
RNF10-222	ENST00000544805	PCDHGB7	Q9Y5F8	929 aa		9.37	□□□□□ -0.91
RNF10-222	ENST00000544805	NID2	Q14112	1375 aa		9.37	□□□□□ -0.91
RNF10-222	ENST00000544805	MKI67	P46013	3256 aa	Known RBP	9.36	□□□□□ -0.91
RNF10-222	ENST00000544805	WDR91	A4D1P6	747 aa		9.36	□□□□□ -0.91
RNF10-222	ENST00000544805	C16orf96	A6NNT2	1141 aa		9.36	□□□□□ -0.91
RNF10-222	ENST00000544805	STMND1	H3BQB6	276 aa		9.36	□□□□□ -0.91
RNF10-222	ENST00000544805	GOLGA8M	H3BSY2	632 aa		9.36	□□□□□ -0.91
RNF10-222	ENST00000544805		H7C0S8	307 aa		9.36	□□□□□ -0.91
RNF10-222	ENST00000544805	TNFRSF10A	O00220	468 aa		9.36	□□□□□ -0.91
RNF10-222	ENST00000544805	AREL1	O15033	823 aa		9.36	□□□□□ -0.91
RNF10-222	ENST00000544805	ST8SIA5	O15466	376 aa		9.36	□□□□□ -0.91
RNF10-222	ENST00000544805	SIN3B	O75182	1162 aa		9.36	□□□□□ -0.91
RNF10-222	ENST00000544805	RFPL1	O75677	317 aa		9.36	□□□□□ -0.91
RNF10-222	ENST00000544805	TSPAN9	O75954	239 aa		9.36	□□□□□ -0.91
RNF10-222	ENST00000544805	FGF18	O76093	207 aa		9.36	□□□□□ -0.91
RNF10-222	ENST00000544805	ALDH1A2	O94788	518 aa		9.36	□□□□□ -0.91
RNF10-222	ENST00000544805	CHRNA1	P02708	482 aa		9.36	□□□□□ -0.91
RNF10-222	ENST00000544805	PGR	P06401	933 aa		9.36	□□□□□ -0.91
RNF10-222	ENST00000544805	APOA4	P06727	396 aa		9.36	□□□□□ -0.91
RNF10-222	ENST00000544805	ALOX5	P09917	674 aa		9.36	□□□□□ -0.91
RNF10-222	ENST00000544805	SMIM10L2A	P0DMW4	78 aa		9.36	□□□□□ -0.91
RNF10-222	ENST00000544805	SMIM10L2B	P0DMW5	78 aa		9.36	□□□□□ -0.91
RNF10-222	ENST00000544805	AR	P10275	920 aa		9.36	□□□□□ -0.91
RNF10-222	ENST00000544805	COL6A2	P12110	1019 aa		9.36	□□□□□ -0.91
RNF10-222	ENST00000544805	HDC	P19113	662 aa		9.36	□□□□□ -0.91
RNF10-222	ENST00000544805	CDH3	P22223	829 aa		9.36	□□□□□ -0.91
RNF10-222	ENST00000544805	ACAT1	P24752	427 aa	Known RBP	9.36	□□□□□ -0.91
RNF10-222	ENST00000544805	RFC2	P35250	354 aa		9.36	□□□□□ -0.91
RNF10-222	ENST00000544805	GPR85	P60893	370 aa		9.36	□□□□□ -0.91
RNF10-222	ENST00000544805	S100A12	P80511	92 aa		9.36	□□□□□ -0.91
RNF10-222	ENST00000544805	NFKB2	Q00653	900 aa		9.36	□□□□□ -0.91
RNF10-222	ENST00000544805	SMAD4	Q13485	552 aa	Known RBP	9.36	□□□□□ -0.91
RNF10-222	ENST00000544805	KCNB1	Q14721	858 aa		9.36	□□□□□ -0.91
RNF10-222	ENST00000544805	MAPKAPK3	Q16644	382 aa		9.36	□□□□□ -0.91
RNF10-222	ENST00000544805	LRIT3	Q3SXY7	679 aa		9.36	□□□□□ -0.91
RNF10-222	ENST00000544805	CYP4A22	Q5TCH4	519 aa		9.36	□□□□□ -0.91
RNF10-222	ENST00000544805	LRRC8D	Q7L1W4	858 aa		9.36	□□□□□ -0.91
RNF10-222	ENST00000544805	TRMT1L	Q7Z2T5	733 aa	Known RBP	9.36	□□□□□ -0.91
RNF10-222	ENST00000544805	SRGAP1	Q7Z6B7	1085 aa		9.36	□□□□□ -0.91
RNF10-222	ENST00000544805	TRIM50	Q86XT4	487 aa		9.36	□□□□□ -0.91
RNF10-222	ENST00000544805	DEFB123	Q8N688	67 aa		9.36	□□□□□ -0.91
RNF10-222	ENST00000544805	CYP2W1	Q8TAV3	490 aa		9.36	□□□□□ -0.91
RNF10-222	ENST00000544805	CCT6B	Q92526	530 aa		9.36	□□□□□ -0.91
RNF10-222	ENST00000544805	KAT2B	Q92831	832 aa		9.36	□□□□□ -0.91
RNF10-222	ENST00000544805	MED30	Q96HR3	178 aa		9.36	□□□□□ -0.91
RNF10-222	ENST00000544805	MAEL	Q96JY0	434 aa	Known RBP	9.36	□□□□□ -0.91
RNF10-222	ENST00000544805	HAUS8	Q9BT25	410 aa		9.36	□□□□□ -0.91
RNF10-222	ENST00000544805	NUF2	Q9BZD4	464 aa		9.36	□□□□□ -0.91
RNF10-222	ENST00000544805	AGO4	Q9HCK5	861 aa	Known RBP	9.36	□□□□□ -0.91
RNF10-222	ENST00000544805	ST7	Q9NRC1	585 aa		9.36	□□□□□ -0.91
RNF10-222	ENST00000544805	SEMA3G	Q9NS98	782 aa		9.36	□□□□□ -0.91
RNF10-222	ENST00000544805	SETD4	Q9NVD3	440 aa		9.36	□□□□□ -0.91
RNF10-222	ENST00000544805	CRNN	Q9UBG3	495 aa	Predicted RBP	9.36	□□□□□ -0.91
RNF10-222	ENST00000544805	ZNF180	Q9UJW8	692 aa		9.36	□□□□□ -0.91
RNF10-222	ENST00000544805	ANAPC5	Q9UJX4	755 aa		9.36	□□□□□ -0.91
RNF10-222	ENST00000544805	PHTF1	Q9UMS5	762 aa		9.36	□□□□□ -0.91
RNF10-222	ENST00000544805	KCNJ14	Q9UNX9	436 aa		9.36	□□□□□ -0.91
RNF10-222	ENST00000544805	PDE4DIP	Q5VU43	2346 aa		9.36	□□□□□ -0.91
RNF10-222	ENST00000544805	UMODL1	Q5DID0	1318 aa		9.35	□□□□□ -0.91
RNF10-222	ENST00000544805	ATXN2	Q99700	1313 aa	Known RBP	9.35	□□□□□ -0.91
RNF10-222	ENST00000544805	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	9.35	□□□□□ -0.91
RNF10-222	ENST00000544805	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	9.35	□□□□□ -0.91
RNF10-222	ENST00000544805	ACOD1	A6NK06	481 aa		9.35	□□□□□ -0.91

Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms