RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 WHRNQ9P202 907 aa13.23□□□□□ -0.29
CHD4-211ENST00000544484 SPASTQ9UBP0 616 aa13.23□□□□□ -0.29
CHD4-211ENST00000544484 HEY2Q9UBP5 337 aa13.23□□□□□ -0.29
CHD4-211ENST00000544484 FAM198AQ9UFP1 575 aa13.23□□□□□ -0.29
CHD4-211ENST00000544484 ANKRD63C9JTQ0 380 aa13.23□□□□□ -0.29
CHD4-211ENST00000544484 EPB42P16452 691 aa13.23□□□□□ -0.29
CHD4-211ENST00000544484 ADIGQ0VDE8 80 aa13.23□□□□□ -0.29
CHD4-211ENST00000544484 GRAMD4Q6IC98 578 aa13.23□□□□□ -0.29
CHD4-211ENST00000544484 SCUBE3Q8IX30 993 aa13.23□□□□□ -0.29
CHD4-211ENST00000544484 INPP5DQ92835 1189 aa13.23□□□□□ -0.29
CHD4-211ENST00000544484 ENTPD7Q9NQZ7 604 aa13.23□□□□□ -0.29
CHD4-211ENST00000544484 VPS28Q9UK41 221 aa13.23□□□□□ -0.29
CHD4-211ENST00000544484 CBX4O00257 560 aa13.23□□□□□ -0.29
CHD4-211ENST00000544484 SOAT2O75908 522 aa13.23□□□□□ -0.29
CHD4-211ENST00000544484 LSM8O95777 96 aaKnown RBP13.23□□□□□ -0.29
CHD4-211ENST00000544484 OXCT1P55809 520 aa13.23□□□□□ -0.29
CHD4-211ENST00000544484 NME5P56597 212 aa13.23□□□□□ -0.29
CHD4-211ENST00000544484 MED21Q13503 144 aa13.23□□□□□ -0.29
CHD4-211ENST00000544484 ILKAPQ9H0C8 392 aaPredicted RBP13.23□□□□□ -0.29
CHD4-211ENST00000544484 TRPM5Q9NZQ8 1165 aa13.23□□□□□ -0.29
CHD4-211ENST00000544484 BARX2Q9UMQ3 279 aaPredicted RBP13.23□□□□□ -0.29
CHD4-211ENST00000544484 ATP11BQ9Y2G3 1177 aa13.23□□□□□ -0.29
CHD4-211ENST00000544484 DEPDC5O75140 1603 aa13.23□□□□□ -0.29
CHD4-211ENST00000544484 NUDT2P50583 147 aa13.23□□□□□ -0.29
CHD4-211ENST00000544484 AGAP9Q5VTM2 703 aa13.23□□□□□ -0.29
CHD4-211ENST00000544484 TFAP2DQ7Z6R9 452 aa13.23□□□□□ -0.29
CHD4-211ENST00000544484 STRA8Q7Z7C7 330 aa13.23□□□□□ -0.29
CHD4-211ENST00000544484 TUBGCP3Q96CW5 907 aa13.23□□□□□ -0.29
CHD4-211ENST00000544484 RIC8BQ9NVN3 520 aa13.23□□□□□ -0.29
CHD4-211ENST00000544484 RNF112Q9ULX5 631 aa13.23□□□□□ -0.29
CHD4-211ENST00000544484 LACTBL1A8MY62 500 aa13.23□□□□□ -0.29
CHD4-211ENST00000544484 ARL4DP49703 201 aa13.23□□□□□ -0.29
CHD4-211ENST00000544484 CBWD6Q4V339 395 aa13.23□□□□□ -0.29
CHD4-211ENST00000544484 LRRC23Q53EV4 343 aaPredicted RBP13.23□□□□□ -0.29
CHD4-211ENST00000544484 CBWD3Q5JTY5 395 aa13.23□□□□□ -0.29
CHD4-211ENST00000544484 CBWD5Q5RIA9 395 aa13.23□□□□□ -0.29
CHD4-211ENST00000544484 PATL1Q86TB9 770 aaKnown RBP13.23□□□□□ -0.29
CHD4-211ENST00000544484 COLGALT1Q8NBJ5 622 aa13.23□□□□□ -0.29
CHD4-211ENST00000544484 SEMA4AQ9H3S1 761 aa13.23□□□□□ -0.29
CHD4-211ENST00000544484 LRRC40Q9H9A6 602 aa13.23□□□□□ -0.29
CHD4-211ENST00000544484 CALCAP01258 141 aa13.22□□□□□ -0.29
CHD4-211ENST00000544484 SLC12A3P55017 1021 aa13.22□□□□□ -0.29
CHD4-211ENST00000544484 TMEM132BQ14DG7 1078 aa13.22□□□□□ -0.29
CHD4-211ENST00000544484 FUT11Q495W5 492 aa13.22□□□□□ -0.29
CHD4-211ENST00000544484 OVOS1Q6IE37 1185 aa13.22□□□□□ -0.29
CHD4-211ENST00000544484 A0A0A6YYK5 440 aaPredicted RBP13.22□□□□□ -0.29
CHD4-211ENST00000544484 SERPINB5P36952 375 aa13.22□□□□□ -0.29
CHD4-211ENST00000544484 EVX2Q03828 476 aa13.22□□□□□ -0.29
CHD4-211ENST00000544484 BFSP2Q13515 415 aa13.22□□□□□ -0.29
CHD4-211ENST00000544484 MYBPC2Q14324 1141 aa13.22□□□□□ -0.29
CHD4-211ENST00000544484 CCNG2Q16589 344 aa13.22□□□□□ -0.29
CHD4-211ENST00000544484 SDE2Q6IQ49 451 aa13.22□□□□□ -0.29
CHD4-211ENST00000544484 ARRDC4Q8NCT1 418 aa13.22□□□□□ -0.29
CHD4-211ENST00000544484 FAM163AQ96GL9 167 aaPredicted RBP13.22□□□□□ -0.29
CHD4-211ENST00000544484 ITGA11Q9UKX5 1188 aa13.22□□□□□ -0.29
CHD4-211ENST00000544484 CXCL11O14625 94 aa13.22□□□□□ -0.29
CHD4-211ENST00000544484 GLRA3O75311 464 aa13.22□□□□□ -0.29
CHD4-211ENST00000544484 URODP06132 367 aa13.22□□□□□ -0.29
CHD4-211ENST00000544484 TLK2Q86UE8 772 aa13.22□□□□□ -0.29
CHD4-211ENST00000544484 EIF2AQ9BY44 585 aaKnown RBP13.22□□□□□ -0.29
CHD4-211ENST00000544484 SCUBE2Q9NQ36 999 aa13.22□□□□□ -0.29
CHD4-211ENST00000544484 PSD3Q9NYI0 1048 aa13.22□□□□□ -0.29
CHD4-211ENST00000544484 L1RE1Q9UN81 338 aa13.22□□□□□ -0.29
CHD4-211ENST00000544484 DDX3XO00571 662 aaKnown RBP eCLIP13.22□□□□□ -0.297e-17■■□□□ 14
CHD4-211ENST00000544484 OCM2P0CE71 109 aa13.22□□□□□ -0.29
CHD4-211ENST00000544484 OCMP0CE72 109 aaPredicted RBP13.22□□□□□ -0.29
CHD4-211ENST00000544484 TPH1P17752 444 aa13.22□□□□□ -0.29
CHD4-211ENST00000544484 MCL1Q07820 350 aa13.22□□□□□ -0.29
CHD4-211ENST00000544484 UNC45BQ8IWX7 931 aa13.22□□□□□ -0.29
CHD4-211ENST00000544484 CATSPER1Q8NEC5 780 aa13.22□□□□□ -0.29
CHD4-211ENST00000544484 SEPT8Q92599 483 aa13.22□□□□□ -0.29
CHD4-211ENST00000544484 ALDH2P05091 517 aa13.22□□□□□ -0.29
CHD4-211ENST00000544484 PYGMP11217 842 aa13.22□□□□□ -0.29
CHD4-211ENST00000544484 RPL10AP62906 217 aaKnown RBP13.22□□□□□ -0.29
CHD4-211ENST00000544484 ZNF280DQ6N043 979 aa13.22□□□□□ -0.29
CHD4-211ENST00000544484 FRMPD4Q14CM0 1322 aa13.21□□□□□ -0.29
CHD4-211ENST00000544484 hCG_2014768A0A024R1R8 64 aa13.21□□□□□ -0.29
CHD4-211ENST00000544484 PQBP1O60828 265 aaKnown RBP13.21□□□□□ -0.29
CHD4-211ENST00000544484 RHOCP08134 193 aa13.21□□□□□ -0.29
CHD4-211ENST00000544484 DDX5P17844 614 aaKnown RBP13.21□□□□□ -0.29
CHD4-211ENST00000544484 SCNN1BP51168 640 aa13.21□□□□□ -0.29
CHD4-211ENST00000544484 CASP5P51878 434 aa13.21□□□□□ -0.29
CHD4-211ENST00000544484 KCNMA1Q12791 1236 aa13.21□□□□□ -0.29
CHD4-211ENST00000544484 KDM7AQ6ZMT4 941 aa13.21□□□□□ -0.29
CHD4-211ENST00000544484 KIRREL3Q8IZU9 778 aa13.21□□□□□ -0.29
CHD4-211ENST00000544484 MICAL2O94851 1124 aa13.21□□□□□ -0.29
CHD4-211ENST00000544484 ARIH2O95376 493 aa13.21□□□□□ -0.29
CHD4-211ENST00000544484 KCNA4P22459 653 aa13.21□□□□□ -0.29
CHD4-211ENST00000544484 RHBDL3P58872 404 aa13.21□□□□□ -0.29
CHD4-211ENST00000544484 BEX3Q00994 111 aa13.21□□□□□ -0.29
CHD4-211ENST00000544484 C1QBPQ07021 282 aaKnown RBP13.21□□□□□ -0.29
CHD4-211ENST00000544484 GALNTL6Q49A17 601 aa13.21□□□□□ -0.29
CHD4-211ENST00000544484 CAPRIN2Q6IMN6 1127 aaKnown RBP13.21□□□□□ -0.29
CHD4-211ENST00000544484 PTF1AQ7RTS3 328 aa13.21□□□□□ -0.29
CHD4-211ENST00000544484 PTAR1Q7Z6K3 402 aaPredicted RBP13.21□□□□□ -0.29
CHD4-211ENST00000544484 ZNF555Q8NEP9 628 aa13.21□□□□□ -0.29
CHD4-211ENST00000544484 TMBIM4Q9HC24 238 aa13.21□□□□□ -0.29
CHD4-211ENST00000544484 GID8Q9NWU2 228 aa13.21□□□□□ -0.29
CHD4-211ENST00000544484 DDHD2O94830 711 aa13.21□□□□□ -0.29
CHD4-211ENST00000544484 FBXO21O94952 628 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms