RNA–Protein interactions for RNA: ENST00000544349.5

VPS33A-209, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS33A, Length 2,114 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-209ENST00000544349 MNX1P50219 401 aaPredicted RBP14.97□□□□□ -0.01
VPS33A-209ENST00000544349 ATN1P54259 1190 aaPredicted RBP14.97□□□□□ -0.01
VPS33A-209ENST00000544349 PLCB3Q01970 1234 aa14.97□□□□□ -0.01
VPS33A-209ENST00000544349 DSC1Q08554 894 aa14.97□□□□□ -0.01
VPS33A-209ENST00000544349 KLF1Q13351 362 aaPredicted RBP14.97□□□□□ -0.01
VPS33A-209ENST00000544349 TAF5Q15542 800 aa14.97□□□□□ -0.01
VPS33A-209ENST00000544349 HADHQ16836 314 aaKnown RBP14.97□□□□□ -0.01
VPS33A-209ENST00000544349 ZFYVE27Q5T4F4 411 aa14.97□□□□□ -0.01
VPS33A-209ENST00000544349 RHBDF2Q6PJF5 856 aa14.97□□□□□ -0.01
VPS33A-209ENST00000544349 SLC39A5Q6ZMH5 540 aa14.97□□□□□ -0.01
VPS33A-209ENST00000544349 ZNF280BQ86YH2 543 aa14.97□□□□□ -0.01
VPS33A-209ENST00000544349 URGCPQ8TCY9 931 aa14.97□□□□□ -0.01
VPS33A-209ENST00000544349 HASPINQ8TF76 798 aa14.97□□□□□ -0.01
VPS33A-209ENST00000544349 RSPH1Q8WYR4 309 aa14.97□□□□□ -0.01
VPS33A-209ENST00000544349 PWWP2AQ96N64 755 aa14.97□□□□□ -0.01
VPS33A-209ENST00000544349 RUNDC3BQ96NL0 473 aa14.97□□□□□ -0.01
VPS33A-209ENST00000544349 SLITRK1Q96PX8 696 aa14.97□□□□□ -0.01
VPS33A-209ENST00000544349 SELENOSQ9BQE4 189 aa14.97□□□□□ -0.01
VPS33A-209ENST00000544349 CNPY3Q9BT09 278 aa14.97□□□□□ -0.01
VPS33A-209ENST00000544349 ELAC1Q9H777 363 aaKnown RBP14.97□□□□□ -0.01
VPS33A-209ENST00000544349 KANSL3Q9P2N6 904 aa14.97□□□□□ -0.01
VPS33A-209ENST00000544349 ASIC3Q9UHC3 531 aa14.97□□□□□ -0.01
VPS33A-209ENST00000544349 MYBPHLA2RUH7 354 aa14.96□□□□□ -0.01
VPS33A-209ENST00000544349 PI4K2BG5E9Z4 385 aa14.96□□□□□ -0.01
VPS33A-209ENST00000544349 B4GALT3O60512 393 aa14.96□□□□□ -0.01
VPS33A-209ENST00000544349 ITGB1P05556 798 aa14.96□□□□□ -0.01
VPS33A-209ENST00000544349 KRT7P08729 469 aa14.96□□□□□ -0.01
VPS33A-209ENST00000544349 RARGP13631 454 aa14.96□□□□□ -0.01
VPS33A-209ENST00000544349 LCP1P13796 627 aa14.96□□□□□ -0.01
VPS33A-209ENST00000544349 CHN1P15882 459 aa14.96□□□□□ -0.01
VPS33A-209ENST00000544349 NPR3P17342 541 aa14.96□□□□□ -0.01
VPS33A-209ENST00000544349 PCSK1P29120 753 aa14.96□□□□□ -0.01
VPS33A-209ENST00000544349 SLC8A3P57103 927 aa14.96□□□□□ -0.01
VPS33A-209ENST00000544349 PTK6Q13882 451 aa14.96□□□□□ -0.01
VPS33A-209ENST00000544349 SPRED3Q2MJR0 410 aa14.96□□□□□ -0.01
VPS33A-209ENST00000544349 MFSD7Q6UXD7 560 aa14.96□□□□□ -0.01
VPS33A-209ENST00000544349 ANKRD33Q7Z3H0 272 aa14.96□□□□□ -0.01
VPS33A-209ENST00000544349 PIGZQ86VD9 579 aa14.96□□□□□ -0.01
VPS33A-209ENST00000544349 METTL23Q86XA0 190 aa14.96□□□□□ -0.01
VPS33A-209ENST00000544349 SEPT8Q92599 483 aa14.96□□□□□ -0.01
VPS33A-209ENST00000544349 RTP3Q9BQQ7 232 aa14.96□□□□□ -0.01
VPS33A-209ENST00000544349 MED10Q9BTT4 135 aa14.96□□□□□ -0.01
VPS33A-209ENST00000544349 CRISPLD2Q9H0B8 497 aa14.96□□□□□ -0.01
VPS33A-209ENST00000544349 DSEQ9UL01 958 aa14.96□□□□□ -0.01
VPS33A-209ENST00000544349 DPYSL4O14531 572 aa14.96□□□□□ -0.01
VPS33A-209ENST00000544349 RGS16O15492 202 aaPredicted RBP14.96□□□□□ -0.01
VPS33A-209ENST00000544349 BEST1O76090 585 aa14.96□□□□□ -0.01
VPS33A-209ENST00000544349 MIPP30301 263 aa14.96□□□□□ -0.01
VPS33A-209ENST00000544349 PCK1P35558 622 aa14.96□□□□□ -0.01
VPS33A-209ENST00000544349 SCNN1AP37088 669 aa14.96□□□□□ -0.01
VPS33A-209ENST00000544349 MMP13P45452 471 aa14.96□□□□□ -0.01
VPS33A-209ENST00000544349 VPS41P49754 854 aa14.96□□□□□ -0.01
VPS33A-209ENST00000544349 COPS2P61201 443 aa14.96□□□□□ -0.01
VPS33A-209ENST00000544349 TTC31Q49AM3 519 aaPredicted RBP14.96□□□□□ -0.01
VPS33A-209ENST00000544349 CCDC38Q502W7 563 aa14.96□□□□□ -0.01
VPS33A-209ENST00000544349 FAM43BQ6ZT52 329 aaPredicted RBP14.96□□□□□ -0.01
VPS33A-209ENST00000544349 CLEC20AQ6ZU45 233 aa14.96□□□□□ -0.01
VPS33A-209ENST00000544349 PRUNE1Q86TP1 453 aa14.96□□□□□ -0.01
VPS33A-209ENST00000544349 COLGALT2Q8IYK4 626 aa14.96□□□□□ -0.01
VPS33A-209ENST00000544349 CLEC4CQ8WTT0 213 aa14.96□□□□□ -0.01
VPS33A-209ENST00000544349 ATXN2LQ8WWM7 1075 aaKnown RBP14.96□□□□□ -0.01
VPS33A-209ENST00000544349 APBB2Q92870 758 aa14.96□□□□□ -0.01
VPS33A-209ENST00000544349 PCED1BQ96HM7 432 aa14.96□□□□□ -0.01
VPS33A-209ENST00000544349 SUSD3Q96L08 255 aa14.96□□□□□ -0.01
VPS33A-209ENST00000544349 XPO6Q96QU8 1125 aaKnown RBP14.96□□□□□ -0.01
VPS33A-209ENST00000544349 FAM129AQ9BZQ8 928 aa14.96□□□□□ -0.01
VPS33A-209ENST00000544349 ZWILCHQ9H900 591 aa14.96□□□□□ -0.01
VPS33A-209ENST00000544349 TBC1D13Q9NVG8 400 aa14.96□□□□□ -0.01
VPS33A-209ENST00000544349 WHRNQ9P202 907 aa14.96□□□□□ -0.01
VPS33A-209ENST00000544349 TET1Q8NFU7 2136 aa14.95□□□□□ -0.02
VPS33A-209ENST00000544349 C5orf60A6NFR6 353 aa14.95□□□□□ -0.02
VPS33A-209ENST00000544349 F8W810 466 aa14.95□□□□□ -0.02
VPS33A-209ENST00000544349 ACSL3O95573 720 aa14.95□□□□□ -0.02
VPS33A-209ENST00000544349 TRUB2O95900 331 aaKnown RBP14.95□□□□□ -0.02
VPS33A-209ENST00000544349 ADCY2Q08462 1091 aa14.95□□□□□ -0.02
VPS33A-209ENST00000544349 IFT88Q13099 833 aa14.95□□□□□ -0.02
VPS33A-209ENST00000544349 CALCOCO2Q13137 446 aa14.95□□□□□ -0.02
VPS33A-209ENST00000544349 AUHQ13825 339 aaKnown RBP14.95□□□□□ -0.02
VPS33A-209ENST00000544349 SLMAPQ14BN4 828 aa14.95□□□□□ -0.02
VPS33A-209ENST00000544349 C15orf59Q2T9L4 293 aaPredicted RBP14.95□□□□□ -0.02
VPS33A-209ENST00000544349 CCDC14Q49A88 953 aa14.95□□□□□ -0.02
VPS33A-209ENST00000544349 ERMARDQ5T6L9 678 aa14.95□□□□□ -0.02
VPS33A-209ENST00000544349 SH3PXD2AQ5TCZ1 1133 aa14.95□□□□□ -0.02
VPS33A-209ENST00000544349 C6orf89Q6UWU4 347 aa14.95□□□□□ -0.02
VPS33A-209ENST00000544349 SPOCD1Q6ZMY3 1216 aa14.95□□□□□ -0.02
VPS33A-209ENST00000544349 SLC26A9Q7LBE3 791 aa14.95□□□□□ -0.02
VPS33A-209ENST00000544349 KCTD13Q8WZ19 329 aa14.95□□□□□ -0.02
VPS33A-209ENST00000544349 ACSF2Q96CM8 615 aaPredicted RBP14.95□□□□□ -0.02
VPS33A-209ENST00000544349 CCDC114Q96M63 670 aa14.95□□□□□ -0.02
VPS33A-209ENST00000544349 ACBD6Q9BR61 282 aa14.95□□□□□ -0.02
VPS33A-209ENST00000544349 PCSK1NQ9UHG2 260 aa14.95□□□□□ -0.02
VPS33A-209ENST00000544349 USP18Q9UMW8 372 aa14.95□□□□□ -0.02
VPS33A-209ENST00000544349 SCN5AQ14524 2016 aa14.95□□□□□ -0.02
VPS33A-209ENST00000544349 FAM200BP0CF97 657 aa14.95□□□□□ -0.02
VPS33A-209ENST00000544349 DRD4P21917 467 aa14.95□□□□□ -0.02
VPS33A-209ENST00000544349 PTPN7P35236 360 aa14.95□□□□□ -0.02
VPS33A-209ENST00000544349 ITGA8P53708 1063 aa14.95□□□□□ -0.02
VPS33A-209ENST00000544349 FAAP100Q0VG06 881 aa14.95□□□□□ -0.02
VPS33A-209ENST00000544349 LONRF1Q17RB8 773 aa14.95□□□□□ -0.02
VPS33A-209ENST00000544349 TCTN1Q2MV58 587 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms