RNA–Protein interactions for RNA: ENST00000544327.1

SCARB1-208, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 1,812 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-208ENST00000544327 MGAT5Q09328 741 aa18.46■□□□□ 0.55
SCARB1-208ENST00000544327 RIPK1Q13546 671 aa18.46■□□□□ 0.55
SCARB1-208ENST00000544327 C4orf22Q6V702 233 aa18.46■□□□□ 0.55
SCARB1-208ENST00000544327 ACOT1Q86TX2 421 aa18.46■□□□□ 0.55
SCARB1-208ENST00000544327 ECHDC2Q86YB7 292 aa18.46■□□□□ 0.55
SCARB1-208ENST00000544327 FITM2Q8N6M3 262 aa18.46■□□□□ 0.55
SCARB1-208ENST00000544327 FAM172AQ8WUF8 416 aa18.46■□□□□ 0.55
SCARB1-208ENST00000544327 RMDN2Q96LZ7 410 aa18.46■□□□□ 0.55
SCARB1-208ENST00000544327 PAIP2Q9BPZ3 127 aaKnown RBP18.46■□□□□ 0.55
SCARB1-208ENST00000544327 C11orf84Q9BUA3 381 aaPredicted RBP18.46■□□□□ 0.55
SCARB1-208ENST00000544327 ABHD16BQ9H3Z7 469 aa18.46■□□□□ 0.55
SCARB1-208ENST00000544327 ECT2Q9H8V3 914 aa18.46■□□□□ 0.55
SCARB1-208ENST00000544327 SNTG2Q9NY99 539 aa18.46■□□□□ 0.55
SCARB1-208ENST00000544327 HESX1Q9UBX0 185 aa18.46■□□□□ 0.55
SCARB1-208ENST00000544327 PHTF1Q9UMS5 762 aa18.46■□□□□ 0.55
SCARB1-208ENST00000544327 TRIP11Q15643 1979 aa18.46■□□□□ 0.55
SCARB1-208ENST00000544327 PIK3R2O00459 728 aa18.46■□□□□ 0.55
SCARB1-208ENST00000544327 PPEF2O14830 753 aa18.46■□□□□ 0.55
SCARB1-208ENST00000544327 PAPSS1O43252 624 aaPredicted RBP18.46■□□□□ 0.55
SCARB1-208ENST00000544327 GABBR2O75899 941 aa18.46■□□□□ 0.55
SCARB1-208ENST00000544327 ECM2O94769 699 aaPredicted RBP18.46■□□□□ 0.55
SCARB1-208ENST00000544327 KRT4P19013 534 aa18.46■□□□□ 0.55
SCARB1-208ENST00000544327 ELK3P41970 407 aa18.46■□□□□ 0.55
SCARB1-208ENST00000544327 MNAT1P51948 309 aa18.46■□□□□ 0.55
SCARB1-208ENST00000544327 GTF2A2P52657 109 aa18.46■□□□□ 0.55
SCARB1-208ENST00000544327 YARSP54577 528 aaKnown RBP18.46■□□□□ 0.55
SCARB1-208ENST00000544327 PDE4CQ08493 712 aa18.46■□□□□ 0.55
SCARB1-208ENST00000544327 NOTUMQ6P988 496 aa18.46■□□□□ 0.55
SCARB1-208ENST00000544327 ZC3H18Q86VM9 953 aaKnown RBP18.46■□□□□ 0.55
SCARB1-208ENST00000544327 PCDH19Q8TAB3 1148 aa18.46■□□□□ 0.55
SCARB1-208ENST00000544327 LRRC8CQ8TDW0 803 aa18.46■□□□□ 0.55
SCARB1-208ENST00000544327 TSPAN18Q96SJ8 248 aa18.46■□□□□ 0.55
SCARB1-208ENST00000544327 SNRNP25Q9BV90 132 aaKnown RBP18.46■□□□□ 0.55
SCARB1-208ENST00000544327 CXCL16Q9H2A7 254 aa18.46■□□□□ 0.55
SCARB1-208ENST00000544327 SPON1Q9HCB6 807 aa18.46■□□□□ 0.55
SCARB1-208ENST00000544327 KAT6AQ92794 2004 aa18.46■□□□□ 0.55
SCARB1-208ENST00000544327 GRAP2O75791 330 aa18.45■□□□□ 0.54
SCARB1-208ENST00000544327 FAM155BO75949 473 aa18.45■□□□□ 0.54
SCARB1-208ENST00000544327 TOMM70O94826 608 aa18.45■□□□□ 0.54
SCARB1-208ENST00000544327 ALADP13716 330 aa18.45■□□□□ 0.54
SCARB1-208ENST00000544327 GBP2P32456 591 aaPredicted RBP18.45■□□□□ 0.54
SCARB1-208ENST00000544327 DNAJC3Q13217 504 aa18.45■□□□□ 0.54
SCARB1-208ENST00000544327 CDO1Q16878 200 aa18.45■□□□□ 0.54
SCARB1-208ENST00000544327 KIZQ2M2Z5 673 aa18.45■□□□□ 0.54
SCARB1-208ENST00000544327 HHATQ5VTY9 493 aa18.45■□□□□ 0.54
SCARB1-208ENST00000544327 C9orf57Q5W0N0 161 aa18.45■□□□□ 0.54
SCARB1-208ENST00000544327 C1orf228Q6PIY5 440 aa18.45■□□□□ 0.54
SCARB1-208ENST00000544327 GPR142Q7Z601 462 aa18.45■□□□□ 0.54
SCARB1-208ENST00000544327 IGDCC3Q8IVU1 814 aa18.45■□□□□ 0.54
SCARB1-208ENST00000544327 BANPQ8N9N5 519 aa18.45■□□□□ 0.54
SCARB1-208ENST00000544327 CENPIQ92674 756 aaPredicted RBP18.45■□□□□ 0.54
SCARB1-208ENST00000544327 TUBGCP4Q9UGJ1 667 aa18.45■□□□□ 0.54
SCARB1-208ENST00000544327 GTF2IRD1Q9UHL9 959 aa18.45■□□□□ 0.54
SCARB1-208ENST00000544327 SCN4AP35499 1836 aa18.45■□□□□ 0.54
SCARB1-208ENST00000544327 SMIM35A0A1B0GVV1 85 aa18.44■□□□□ 0.54
SCARB1-208ENST00000544327 CCNB1P14635 433 aa18.44■□□□□ 0.54
SCARB1-208ENST00000544327 NQO1P15559 274 aaKnown RBP18.44■□□□□ 0.54
SCARB1-208ENST00000544327 AXLP30530 894 aa18.44■□□□□ 0.54
SCARB1-208ENST00000544327 HDAC4P56524 1084 aa18.44■□□□□ 0.54
SCARB1-208ENST00000544327 BCAR1P56945 870 aa18.44■□□□□ 0.54
SCARB1-208ENST00000544327 ATP11AP98196 1134 aa18.44■□□□□ 0.54
SCARB1-208ENST00000544327 LVRNQ6Q4G3 990 aa18.44■□□□□ 0.54
SCARB1-208ENST00000544327 FAM47EQ6ZV65 393 aa18.44■□□□□ 0.54
SCARB1-208ENST00000544327 CATSPER4Q7RTX7 472 aa18.44■□□□□ 0.54
SCARB1-208ENST00000544327 DPP9Q86TI2 863 aa18.44■□□□□ 0.54
SCARB1-208ENST00000544327 CRYBG2Q8N1P7 616 aa18.44■□□□□ 0.54
SCARB1-208ENST00000544327 ANKLE1Q8NAG6 615 aa18.44■□□□□ 0.54
SCARB1-208ENST00000544327 SLC44A1Q8WWI5 657 aa18.44■□□□□ 0.54
SCARB1-208ENST00000544327 TINF2Q9BSI4 451 aa18.44■□□□□ 0.54
SCARB1-208ENST00000544327 EIF2AQ9BY44 585 aaKnown RBP18.44■□□□□ 0.54
SCARB1-208ENST00000544327 NGRNQ9NPE2 291 aaKnown RBP18.44■□□□□ 0.54
SCARB1-208ENST00000544327 SETD4Q9NVD3 440 aa18.44■□□□□ 0.54
SCARB1-208ENST00000544327 UBQLN1Q9UMX0 589 aaKnown RBP18.44■□□□□ 0.54
SCARB1-208ENST00000544327 CHMP2BQ9UQN3 213 aa18.44■□□□□ 0.54
SCARB1-208ENST00000544327 USH1CQ9Y6N9 552 aa18.44■□□□□ 0.54
SCARB1-208ENST00000544327 CCL15-CCL14A0A0B4J2E2 113 aa18.44■□□□□ 0.54
SCARB1-208ENST00000544327 IQANK1A0A1B0GTG1 560 aa18.44■□□□□ 0.54
SCARB1-208ENST00000544327 MBLAC1A4D2B0 266 aaPredicted RBP18.44■□□□□ 0.54
SCARB1-208ENST00000544327 DARSP14868 501 aaKnown RBP18.44■□□□□ 0.54
SCARB1-208ENST00000544327 IRF5Q13568 498 aa18.44■□□□□ 0.54
SCARB1-208ENST00000544327 DPYSL2Q16555 572 aa18.44■□□□□ 0.54
SCARB1-208ENST00000544327 CCL15Q16663 113 aa18.44■□□□□ 0.54
SCARB1-208ENST00000544327 SOWAHAQ2M3V2 549 aa18.44■□□□□ 0.54
SCARB1-208ENST00000544327 ASRGL1Q7L266 308 aa18.44■□□□□ 0.54
SCARB1-208ENST00000544327 SLC26A9Q7LBE3 791 aa18.44■□□□□ 0.54
SCARB1-208ENST00000544327 LIMS2Q7Z4I7 341 aa18.44■□□□□ 0.54
SCARB1-208ENST00000544327 FAM228AQ86W67 206 aa18.44■□□□□ 0.54
SCARB1-208ENST00000544327 CDKL3Q8IVW4 592 aaPredicted RBP18.44■□□□□ 0.54
SCARB1-208ENST00000544327 MCUQ8NE86 351 aa18.44■□□□□ 0.54
SCARB1-208ENST00000544327 FAM49BQ9NUQ9 324 aa18.44■□□□□ 0.54
SCARB1-208ENST00000544327 NRCAMQ92823 1304 aa18.43■□□□□ 0.54
SCARB1-208ENST00000544327 TCRBV9S1A1TA0A576 114 aa18.43■□□□□ 0.54
SCARB1-208ENST00000544327 KBTBD13C9JR72 458 aa18.43■□□□□ 0.54
SCARB1-208ENST00000544327 PIRO00625 290 aa18.43■□□□□ 0.54
SCARB1-208ENST00000544327 KCNN4O15554 427 aa18.43■□□□□ 0.54
SCARB1-208ENST00000544327 ZBED1O96006 694 aa18.43■□□□□ 0.54
SCARB1-208ENST00000544327 CD4P01730 458 aa18.43■□□□□ 0.54
SCARB1-208ENST00000544327 GSTA2P09210 222 aa18.43■□□□□ 0.54
SCARB1-208ENST00000544327 YBX3P16989 372 aaKnown RBP eCLIP18.43■□□□□ 0.541e-6■□□□□ 8
SCARB1-208ENST00000544327 ZFXP17010 805 aaPredicted RBP18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms