RNA–Protein interactions for RNA: ENST00000544079.2

CCT4-204, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

TSL 2 BASIC

Gene CCT4, Length 2,261 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-204ENST00000544079 BCAP29Q9UHQ4 241 aa18.95■□□□□ 0.62
CCT4-204ENST00000544079 TRIM43BA6NCK2 446 aa18.95■□□□□ 0.62
CCT4-204ENST00000544079 TRIM49D1C9J1S8 452 aa18.95■□□□□ 0.62
CCT4-204ENST00000544079 PI4K2BG5E9Z4 385 aa18.95■□□□□ 0.62
CCT4-204ENST00000544079 H0YJX3 145 aa18.95■□□□□ 0.62
CCT4-204ENST00000544079 BOLA2-SMG1P6H3BVE0 249 aa18.95■□□□□ 0.62
CCT4-204ENST00000544079 DKC1O60832 514 aaKnown RBP eCLIP18.95■□□□□ 0.62
CCT4-204ENST00000544079 ITGAXP20702 1163 aa18.95■□□□□ 0.62
CCT4-204ENST00000544079 GAD2Q05329 585 aa18.95■□□□□ 0.62
CCT4-204ENST00000544079 RWDD4Q6NW29 188 aaKnown RBP18.95■□□□□ 0.62
CCT4-204ENST00000544079 SPIRE2Q8WWL2 714 aa18.95■□□□□ 0.62
CCT4-204ENST00000544079 COX4I2Q96KJ9 171 aa18.95■□□□□ 0.62
CCT4-204ENST00000544079 LRGUKQ96M69 825 aa18.95■□□□□ 0.62
CCT4-204ENST00000544079 EBF4Q9BQW3 602 aa18.95■□□□□ 0.62
CCT4-204ENST00000544079 MECRQ9BV79 373 aa18.95■□□□□ 0.62
CCT4-204ENST00000544079 WDR11Q9BZH6 1224 aa18.95■□□□□ 0.62
CCT4-204ENST00000544079 RRN3Q9NYV6 651 aa18.95■□□□□ 0.62
CCT4-204ENST00000544079 TISP43B9A030 160 aa18.94■□□□□ 0.62
CCT4-204ENST00000544079 FBXO21O94952 628 aa18.94■□□□□ 0.62
CCT4-204ENST00000544079 HOXD12P35452 270 aa18.94■□□□□ 0.62
CCT4-204ENST00000544079 MRPS5P82675 430 aaKnown RBP18.94■□□□□ 0.62
CCT4-204ENST00000544079 RELAQ04206 551 aa18.94■□□□□ 0.62
CCT4-204ENST00000544079 STXBP5Q5T5C0 1151 aa18.94■□□□□ 0.62
CCT4-204ENST00000544079 ARHGEF1Q92888 912 aaKnown RBP18.94■□□□□ 0.62
CCT4-204ENST00000544079 XAB2Q9HCS7 855 aaKnown RBP18.94■□□□□ 0.62
CCT4-204ENST00000544079 DNAJC28Q9NX36 388 aa18.94■□□□□ 0.62
CCT4-204ENST00000544079 XPO7Q9UIA9 1087 aaKnown RBP18.94■□□□□ 0.62
CCT4-204ENST00000544079 SLX4Q8IY92 1834 aa18.94■□□□□ 0.62
CCT4-204ENST00000544079 ZNF701M0R085 212 aaPredicted RBP18.94■□□□□ 0.62
CCT4-204ENST00000544079 WEE2P0C1S8 567 aa18.94■□□□□ 0.62
CCT4-204ENST00000544079 RPL22P35268 128 aaKnown RBP18.94■□□□□ 0.62
CCT4-204ENST00000544079 CDKN2BP42772 138 aa18.94■□□□□ 0.62
CCT4-204ENST00000544079 NOMO3P69849 1222 aa18.94■□□□□ 0.62
CCT4-204ENST00000544079 PFKPQ01813 784 aa18.94■□□□□ 0.62
CCT4-204ENST00000544079 SNRNP35Q16560 246 aaKnown RBP18.94■□□□□ 0.62
CCT4-204ENST00000544079 CYP2W1Q8TAV3 490 aa18.94■□□□□ 0.62
CCT4-204ENST00000544079 PIWIL2Q8TC59 973 aaKnown RBP18.94■□□□□ 0.62
CCT4-204ENST00000544079 TAS1R2Q8TE23 839 aa18.94■□□□□ 0.62
CCT4-204ENST00000544079 C17orf50Q8WW18 174 aa18.94■□□□□ 0.62
CCT4-204ENST00000544079 CNBD2Q96M20 576 aa18.94■□□□□ 0.62
CCT4-204ENST00000544079 PRPF19Q9UMS4 504 aaKnown RBP18.94■□□□□ 0.62
CCT4-204ENST00000544079 TEX264Q9Y6I9 313 aa18.94■□□□□ 0.62
CCT4-204ENST00000544079 LOC102724428A0A0B4J2F2 783 aa18.93■□□□□ 0.62
CCT4-204ENST00000544079 SIN3BO75182 1162 aa18.93■□□□□ 0.62
CCT4-204ENST00000544079 PIAS1O75925 651 aa18.93■□□□□ 0.62
CCT4-204ENST00000544079 TMEM63AO94886 807 aa18.93■□□□□ 0.62
CCT4-204ENST00000544079 KITP10721 976 aa18.93■□□□□ 0.62
CCT4-204ENST00000544079 CRHR1P34998 444 aa18.93■□□□□ 0.62
CCT4-204ENST00000544079 PHKA2P46019 1235 aa18.93■□□□□ 0.62
CCT4-204ENST00000544079 SIK1P57059 783 aa18.93■□□□□ 0.62
CCT4-204ENST00000544079 LLGL2Q6P1M3 1020 aa18.93■□□□□ 0.62
CCT4-204ENST00000544079 FBXO11Q86XK2 927 aa18.93■□□□□ 0.62
CCT4-204ENST00000544079 HPS6Q86YV9 775 aa18.93■□□□□ 0.62
CCT4-204ENST00000544079 HOMEZQ8IX15 550 aa18.93■□□□□ 0.62
CCT4-204ENST00000544079 DEFB107AQ8IZN7 70 aa18.93■□□□□ 0.62
CCT4-204ENST00000544079 RIN3Q8TB24 985 aa18.93■□□□□ 0.62
CCT4-204ENST00000544079 C11orf70Q9BRQ4 267 aa18.93■□□□□ 0.62
CCT4-204ENST00000544079 IGSF9Q9P2J2 1179 aa18.93■□□□□ 0.62
CCT4-204ENST00000544079 APPL1Q9UKG1 709 aa18.93■□□□□ 0.62
CCT4-204ENST00000544079 ARHGAP26Q9UNA1 814 aa18.93■□□□□ 0.62
CCT4-204ENST00000544079 FADS3Q9Y5Q0 445 aa18.93■□□□□ 0.62
CCT4-204ENST00000544079 CCDC162PA2VCL2 907 aa18.93■□□□□ 0.62
CCT4-204ENST00000544079 ZNF12P17014 697 aa18.93■□□□□ 0.62
CCT4-204ENST00000544079 ELK3P41970 407 aa18.93■□□□□ 0.62
CCT4-204ENST00000544079 TUBA4AP68366 448 aa18.93■□□□□ 0.62
CCT4-204ENST00000544079 ATP13A4Q4VNC1 1196 aa18.93■□□□□ 0.62
CCT4-204ENST00000544079 CCDC124Q96CT7 223 aaKnown RBP18.93■□□□□ 0.62
CCT4-204ENST00000544079 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.93■□□□□ 0.625e-12■■■■■ 42.4
CCT4-204ENST00000544079 SPATA7Q9P0W8 599 aa18.93■□□□□ 0.62
CCT4-204ENST00000544079 MARCOQ9UEW3 520 aaPredicted RBP18.93■□□□□ 0.62
CCT4-204ENST00000544079 STK39Q9UEW8 545 aa18.93■□□□□ 0.62
CCT4-204ENST00000544079 SERPINB13Q9UIV8 391 aa18.93■□□□□ 0.62
CCT4-204ENST00000544079 RIMS3Q9UJD0 308 aa18.93■□□□□ 0.62
CCT4-204ENST00000544079 GNEQ9Y223 722 aaKnown RBP18.93■□□□□ 0.62
CCT4-204ENST00000544079 TDRKHQ9Y2W6 561 aaKnown RBP18.93■□□□□ 0.62
CCT4-204ENST00000544079 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.92■□□□□ 0.62
CCT4-204ENST00000544079 HTR3EA5X5Y0 456 aa18.92■□□□□ 0.62
CCT4-204ENST00000544079 TRDMT1O14717 391 aaKnown RBP18.92■□□□□ 0.62
CCT4-204ENST00000544079 RFPL1O75677 317 aa18.92■□□□□ 0.62
CCT4-204ENST00000544079 C1QAP02745 245 aa18.92■□□□□ 0.62
CCT4-204ENST00000544079 RBP3P10745 1247 aa18.92■□□□□ 0.62
CCT4-204ENST00000544079 ALOX15P16050 662 aaPredicted RBP18.92■□□□□ 0.62
CCT4-204ENST00000544079 DSG3P32926 999 aa18.92■□□□□ 0.62
CCT4-204ENST00000544079 PPARGP37231 505 aaPredicted RBP18.92■□□□□ 0.62
CCT4-204ENST00000544079 ITPK1Q13572 414 aa18.92■□□□□ 0.62
CCT4-204ENST00000544079 WDR78Q5VTH9 848 aa18.92■□□□□ 0.62
CCT4-204ENST00000544079 IYDQ6PHW0 289 aa18.92■□□□□ 0.62
CCT4-204ENST00000544079 PADI6Q6TGC4 694 aa18.92■□□□□ 0.62
CCT4-204ENST00000544079 DENND5BQ6ZUT9 1274 aa18.92■□□□□ 0.62
CCT4-204ENST00000544079 SLC15A3Q8IY34 581 aa18.92■□□□□ 0.62
CCT4-204ENST00000544079 LZTR1Q8N653 840 aa18.92■□□□□ 0.62
CCT4-204ENST00000544079 GIPC3Q8TF64 312 aa18.92■□□□□ 0.62
CCT4-204ENST00000544079 SGF29Q96ES7 293 aa18.92■□□□□ 0.62
CCT4-204ENST00000544079 MFSD14AQ96MC6 490 aa18.92■□□□□ 0.62
CCT4-204ENST00000544079 RTKNQ9BST9 563 aa18.92■□□□□ 0.62
CCT4-204ENST00000544079 WDR18Q9BV38 432 aa18.92■□□□□ 0.62
CCT4-204ENST00000544079 FRMD8Q9BZ67 464 aaPredicted RBP18.92■□□□□ 0.62
CCT4-204ENST00000544079 KLHL11Q9NVR0 708 aa18.92■□□□□ 0.62
CCT4-204ENST00000544079 WRAP73Q9P2S5 460 aaPredicted RBP18.92■□□□□ 0.62
CCT4-204ENST00000544079 TMEM191CA6NGB0 347 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms