RNA–Protein interactions for RNA: ENST00000543359.5

TNFRSF1A-215, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 627 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-215ENST00000543359 PPP2R5DQ14738 602 aa13.85□□□□□ -0.19
TNFRSF1A-215ENST00000543359 DHCR24Q15392 516 aa13.85□□□□□ -0.19
TNFRSF1A-215ENST00000543359 ARHGAP17Q68EM7 881 aa13.85□□□□□ -0.19
TNFRSF1A-215ENST00000543359 LONP2Q86WA8 852 aa13.85□□□□□ -0.19
TNFRSF1A-215ENST00000543359 TTC39CQ8N584 583 aa13.85□□□□□ -0.19
TNFRSF1A-215ENST00000543359 CCDC150Q8NCX0 1101 aa13.85□□□□□ -0.19
TNFRSF1A-215ENST00000543359 TMEM176AQ96HP8 235 aa13.85□□□□□ -0.19
TNFRSF1A-215ENST00000543359 CEP63Q96MT8 703 aa13.85□□□□□ -0.19
TNFRSF1A-215ENST00000543359 NMUR1Q9HB89 426 aa13.85□□□□□ -0.19
TNFRSF1A-215ENST00000543359 CYLDQ9NQC7 956 aa13.85□□□□□ -0.19
TNFRSF1A-215ENST00000543359 SMG5Q9UPR3 1016 aaKnown RBP13.85□□□□□ -0.19
TNFRSF1A-215ENST00000543359 USP3Q9Y6I4 520 aa13.85□□□□□ -0.19
TNFRSF1A-215ENST00000543359 A0A0A0MRY4 1105 aa13.84□□□□□ -0.19
TNFRSF1A-215ENST00000543359 E2F8A0AVK6 867 aa13.84□□□□□ -0.19
TNFRSF1A-215ENST00000543359 K7EQS6 105 aa13.84□□□□□ -0.19
TNFRSF1A-215ENST00000543359 SLC9A3R1O14745 358 aaPredicted RBP13.84□□□□□ -0.19
TNFRSF1A-215ENST00000543359 PSMA7O14818 248 aa13.84□□□□□ -0.19
TNFRSF1A-215ENST00000543359 CYP26A1O43174 497 aa13.84□□□□□ -0.19
TNFRSF1A-215ENST00000543359 SLC6A11P48066 632 aa13.84□□□□□ -0.19
TNFRSF1A-215ENST00000543359 NR1H3Q13133 447 aa13.84□□□□□ -0.19
TNFRSF1A-215ENST00000543359 CUL2Q13617 745 aa13.84□□□□□ -0.19
TNFRSF1A-215ENST00000543359 ZNF394Q53GI3 561 aa13.84□□□□□ -0.19
TNFRSF1A-215ENST00000543359 DCAF17Q5H9S7 520 aaPredicted RBP13.84□□□□□ -0.19
TNFRSF1A-215ENST00000543359 TCERG1LQ5VWI1 586 aa13.84□□□□□ -0.19
TNFRSF1A-215ENST00000543359 SCD5Q86SK9 330 aa13.84□□□□□ -0.19
TNFRSF1A-215ENST00000543359 DDX42Q86XP3 938 aaKnown RBP eCLIP13.84□□□□□ -0.19
TNFRSF1A-215ENST00000543359 ZNF276Q8N554 614 aa13.84□□□□□ -0.19
TNFRSF1A-215ENST00000543359 LMO3Q8TAP4 145 aa13.84□□□□□ -0.19
TNFRSF1A-215ENST00000543359 HEXIM2Q96MH2 286 aaKnown RBP13.84□□□□□ -0.19
TNFRSF1A-215ENST00000543359 KLF16Q9BXK1 252 aaPredicted RBP13.84□□□□□ -0.19
TNFRSF1A-215ENST00000543359 UBXN6Q9BZV1 441 aa13.84□□□□□ -0.19
TNFRSF1A-215ENST00000543359 METTL14Q9HCE5 456 aaKnown RBP13.84□□□□□ -0.19
TNFRSF1A-215ENST00000543359 EML5Q05BV3 1969 aa13.83□□□□□ -0.19
TNFRSF1A-215ENST00000543359 NCOR2Q9Y618 2525 aa13.83□□□□□ -0.2
TNFRSF1A-215ENST00000543359 A0A1W2PQH9 124 aa13.83□□□□□ -0.2
TNFRSF1A-215ENST00000543359 TLR5O60602 858 aa13.83□□□□□ -0.2
TNFRSF1A-215ENST00000543359 ATG13O75143 517 aa13.83□□□□□ -0.2
TNFRSF1A-215ENST00000543359 ACO1P21399 889 aaKnown RBP13.83□□□□□ -0.2
TNFRSF1A-215ENST00000543359 FMO5P49326 533 aa13.83□□□□□ -0.2
TNFRSF1A-215ENST00000543359 SRSF5Q13243 272 aaKnown RBP13.83□□□□□ -0.2
TNFRSF1A-215ENST00000543359 FBXO43Q4G163 708 aa13.83□□□□□ -0.2
TNFRSF1A-215ENST00000543359 WDR5BQ86VZ2 330 aa13.83□□□□□ -0.2
TNFRSF1A-215ENST00000543359 C12orf40Q86WS4 652 aa13.83□□□□□ -0.2
TNFRSF1A-215ENST00000543359 SFTPA1Q8IWL2 248 aa13.83□□□□□ -0.2
TNFRSF1A-215ENST00000543359 PHTF2Q8N3S3 785 aa13.83□□□□□ -0.2
TNFRSF1A-215ENST00000543359 NELFBQ8WX92 580 aa13.83□□□□□ -0.2
TNFRSF1A-215ENST00000543359 JAKMIP2Q96AA8 810 aa13.83□□□□□ -0.2
TNFRSF1A-215ENST00000543359 TLR8Q9NR97 1041 aaKnown RBP13.83□□□□□ -0.2
TNFRSF1A-215ENST00000543359 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.83□□□□□ -0.2
TNFRSF1A-215ENST00000543359 SPAG17Q6Q759 2223 aa13.83□□□□□ -0.2
TNFRSF1A-215ENST00000543359 MYO18AQ92614 2054 aaKnown RBP13.83□□□□□ -0.2
TNFRSF1A-215ENST00000543359 SPTBN2O15020 2390 aa13.82□□□□□ -0.2
TNFRSF1A-215ENST00000543359 CCDC163A0A0D9SF12 145 aa13.82□□□□□ -0.2
TNFRSF1A-215ENST00000543359 BIN1O00499 593 aa13.82□□□□□ -0.2
TNFRSF1A-215ENST00000543359 CNR2P34972 360 aa13.82□□□□□ -0.2
TNFRSF1A-215ENST00000543359 PPP1R2P41236 205 aa13.82□□□□□ -0.2
TNFRSF1A-215ENST00000543359 STIM1Q13586 685 aa13.82□□□□□ -0.2
TNFRSF1A-215ENST00000543359 RAB41Q5JT25 222 aa13.82□□□□□ -0.2
TNFRSF1A-215ENST00000543359 LY6G5CQ5SRR4 150 aa13.82□□□□□ -0.2
TNFRSF1A-215ENST00000543359 HEATR6Q6AI08 1181 aaKnown RBP13.82□□□□□ -0.2
TNFRSF1A-215ENST00000543359 KLHL10Q6JEL2 608 aa13.82□□□□□ -0.2
TNFRSF1A-215ENST00000543359 KLHDC10Q6PID8 442 aa13.82□□□□□ -0.2
TNFRSF1A-215ENST00000543359 HTR3DQ70Z44 454 aa13.82□□□□□ -0.2
TNFRSF1A-215ENST00000543359 SYT13Q7L8C5 426 aa13.82□□□□□ -0.2
TNFRSF1A-215ENST00000543359 CCDC186Q7Z3E2 898 aa13.82□□□□□ -0.2
TNFRSF1A-215ENST00000543359 TTC30AQ86WT1 665 aa13.82□□□□□ -0.2
TNFRSF1A-215ENST00000543359 BBS7Q8IWZ6 715 aa13.82□□□□□ -0.2
TNFRSF1A-215ENST00000543359 KIAA2013Q8IYS2 634 aa13.82□□□□□ -0.2
TNFRSF1A-215ENST00000543359 ANKRD52Q8NB46 1076 aa13.82□□□□□ -0.2
TNFRSF1A-215ENST00000543359 RPLP0P6Q8NHW5 317 aa13.82□□□□□ -0.2
TNFRSF1A-215ENST00000543359 USP33Q8TEY7 942 aa13.82□□□□□ -0.2
TNFRSF1A-215ENST00000543359 EXOC4Q96A65 974 aa13.82□□□□□ -0.2
TNFRSF1A-215ENST00000543359 OTUB2Q96DC9 234 aa13.82□□□□□ -0.2
TNFRSF1A-215ENST00000543359 MED15Q96RN5 788 aa13.82□□□□□ -0.2
TNFRSF1A-215ENST00000543359 TBC1D14Q9P2M4 693 aa13.82□□□□□ -0.2
TNFRSF1A-215ENST00000543359 TULP2O00295 520 aa13.81□□□□□ -0.2
TNFRSF1A-215ENST00000543359 RARGP13631 454 aa13.81□□□□□ -0.2
TNFRSF1A-215ENST00000543359 TRIM21P19474 475 aaKnown RBP13.81□□□□□ -0.2
TNFRSF1A-215ENST00000543359 ATP5C1P36542 298 aaKnown RBP13.81□□□□□ -0.2
TNFRSF1A-215ENST00000543359 EIF2DP41214 584 aaKnown RBP13.81□□□□□ -0.2
TNFRSF1A-215ENST00000543359 PXNP49023 591 aaPredicted RBP13.81□□□□□ -0.2
TNFRSF1A-215ENST00000543359 MARSP56192 900 aaKnown RBP13.81□□□□□ -0.2
TNFRSF1A-215ENST00000543359 BHLHA9Q7RTU4 235 aa13.81□□□□□ -0.2
TNFRSF1A-215ENST00000543359 PIGZQ86VD9 579 aa13.81□□□□□ -0.2
TNFRSF1A-215ENST00000543359 TMEM25Q86YD3 366 aa13.81□□□□□ -0.2
TNFRSF1A-215ENST00000543359 TRIM59Q8IWR1 403 aa13.81□□□□□ -0.2
TNFRSF1A-215ENST00000543359 ETFBKMTQ8IXQ9 262 aa13.81□□□□□ -0.2
TNFRSF1A-215ENST00000543359 CAMKK1Q8N5S9 505 aa13.81□□□□□ -0.2
TNFRSF1A-215ENST00000543359 P2RY11Q96G91 374 aa13.81□□□□□ -0.2
TNFRSF1A-215ENST00000543359 ZSWIM1Q9BR11 485 aa13.81□□□□□ -0.2
TNFRSF1A-215ENST00000543359 PARD6AQ9NPB6 346 aa13.81□□□□□ -0.2
TNFRSF1A-215ENST00000543359 NUDT5Q9UKK9 219 aa13.81□□□□□ -0.2
TNFRSF1A-215ENST00000543359 CTNND2Q9UQB3 1225 aa13.81□□□□□ -0.2
TNFRSF1A-215ENST00000543359 RNF225M0QZC1 329 aaPredicted RBP13.8□□□□□ -0.2
TNFRSF1A-215ENST00000543359 MDM4O15151 490 aa13.8□□□□□ -0.2
TNFRSF1A-215ENST00000543359 ADH1CP00326 375 aa13.8□□□□□ -0.2
TNFRSF1A-215ENST00000543359 ADH5P11766 374 aa13.8□□□□□ -0.2
TNFRSF1A-215ENST00000543359 PSEN1P49768 467 aa13.8□□□□□ -0.2
TNFRSF1A-215ENST00000543359 STX17P56962 302 aa13.8□□□□□ -0.2
TNFRSF1A-215ENST00000543359 UBE2HP62256 183 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms