RNA–Protein interactions for RNA: ENST00000543199.5

GPN3-203, Transcript of GPN-loop GTPase 3, humanhuman

TSL 5 BASIC

Gene GPN3, Length 1,604 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-203ENST00000543199 ZNF252P-AS1Q0IIN9 211 aa13.57□□□□□ -0.24
GPN3-203ENST00000543199 CUL4BQ13620 913 aa13.57□□□□□ -0.24
GPN3-203ENST00000543199 KNOP1Q1ED39 458 aaKnown RBP13.57□□□□□ -0.24
GPN3-203ENST00000543199 BMT2Q1RMZ1 405 aa13.57□□□□□ -0.24
GPN3-203ENST00000543199 EOGTQ5NDL2 527 aa13.57□□□□□ -0.24
GPN3-203ENST00000543199 PAQR9Q6ZVX9 377 aa13.57□□□□□ -0.24
GPN3-203ENST00000543199 TMEFF1Q8IYR6 380 aa13.57□□□□□ -0.24
GPN3-203ENST00000543199 PGBD3Q8N328 593 aa13.57□□□□□ -0.24
GPN3-203ENST00000543199 OLIG1Q8TAK6 271 aa13.57□□□□□ -0.24
GPN3-203ENST00000543199 OVCA2Q8WZ82 227 aa13.57□□□□□ -0.24
GPN3-203ENST00000543199 GBP4Q96PP9 640 aa13.57□□□□□ -0.24
GPN3-203ENST00000543199 MAGEF1Q9HAY2 307 aa13.57□□□□□ -0.24
GPN3-203ENST00000543199 POLMQ9NP87 494 aaPredicted RBP13.57□□□□□ -0.24
GPN3-203ENST00000543199 DMAP1Q9NPF5 467 aaPredicted RBP13.57□□□□□ -0.24
GPN3-203ENST00000543199 KRT82Q9NSB4 513 aa13.57□□□□□ -0.24
GPN3-203ENST00000543199 GMIPQ9P107 970 aa13.57□□□□□ -0.24
GPN3-203ENST00000543199 ATXN2Q99700 1313 aaKnown RBP13.56□□□□□ -0.24
GPN3-203ENST00000543199 TBC1D3BA6NDS4 549 aa13.56□□□□□ -0.24
GPN3-203ENST00000543199 LRRIQ3A6PVS8 624 aaPredicted RBP13.56□□□□□ -0.24
GPN3-203ENST00000543199 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.56□□□□□ -0.24
GPN3-203ENST00000543199 CDX4O14627 284 aaPredicted RBP13.56□□□□□ -0.24
GPN3-203ENST00000543199 MAP3K13O43283 966 aa13.56□□□□□ -0.24
GPN3-203ENST00000543199 IRF1P10914 325 aa13.56□□□□□ -0.24
GPN3-203ENST00000543199 P2RY2P41231 377 aa13.56□□□□□ -0.24
GPN3-203ENST00000543199 PTGER3P43115 390 aa13.56□□□□□ -0.24
GPN3-203ENST00000543199 GAD2Q05329 585 aa13.56□□□□□ -0.24
GPN3-203ENST00000543199 ORC1Q13415 861 aa13.56□□□□□ -0.24
GPN3-203ENST00000543199 NCOA4Q13772 614 aa13.56□□□□□ -0.24
GPN3-203ENST00000543199 ANO4Q32M45 955 aa13.56□□□□□ -0.24
GPN3-203ENST00000543199 UAP1L1Q3KQV9 507 aa13.56□□□□□ -0.24
GPN3-203ENST00000543199 TRIM61Q5EBN2 209 aa13.56□□□□□ -0.24
GPN3-203ENST00000543199 ZNF667Q5HYK9 610 aa13.56□□□□□ -0.24
GPN3-203ENST00000543199 LPCAT2Q7L5N7 544 aa13.56□□□□□ -0.24
GPN3-203ENST00000543199 ACOT1Q86TX2 421 aa13.56□□□□□ -0.24
GPN3-203ENST00000543199 BBS7Q8IWZ6 715 aa13.56□□□□□ -0.24
GPN3-203ENST00000543199 C12orf56Q8IXR9 622 aa13.56□□□□□ -0.24
GPN3-203ENST00000543199 GRAMD1CQ8IYS0 662 aa13.56□□□□□ -0.24
GPN3-203ENST00000543199 PHTF2Q8N3S3 785 aa13.56□□□□□ -0.24
GPN3-203ENST00000543199 SMARCD1Q96GM5 515 aa13.56□□□□□ -0.24
GPN3-203ENST00000543199 TNIP3Q96KP6 325 aa13.56□□□□□ -0.24
GPN3-203ENST00000543199 NACA2Q9H009 215 aa13.56□□□□□ -0.24
GPN3-203ENST00000543199 SDCBP2Q9H190 292 aa13.56□□□□□ -0.24
GPN3-203ENST00000543199 WDFY3Q8IZQ1 3526 aa13.55□□□□□ -0.24
GPN3-203ENST00000543199 TNFRSF10BO14763 440 aa13.55□□□□□ -0.24
GPN3-203ENST00000543199 AP1G2O75843 785 aa13.55□□□□□ -0.24
GPN3-203ENST00000543199 CCDC130P13994 396 aa13.55□□□□□ -0.24
GPN3-203ENST00000543199 TNFRSF4P43489 277 aa13.55□□□□□ -0.24
GPN3-203ENST00000543199 FOXC1Q12948 553 aa13.55□□□□□ -0.24
GPN3-203ENST00000543199 HSF5Q4G112 596 aaPredicted RBP13.55□□□□□ -0.24
GPN3-203ENST00000543199 BTBD8Q5XKL5 378 aa13.55□□□□□ -0.24
GPN3-203ENST00000543199 ETFBKMTQ8IXQ9 262 aa13.55□□□□□ -0.24
GPN3-203ENST00000543199 ZNF513Q8N8E2 541 aaPredicted RBP13.55□□□□□ -0.24
GPN3-203ENST00000543199 WBP2Q969T9 261 aa13.55□□□□□ -0.24
GPN3-203ENST00000543199 OTUB2Q96DC9 234 aa13.55□□□□□ -0.24
GPN3-203ENST00000543199 VRTNQ9H8Y1 702 aa13.55□□□□□ -0.24
GPN3-203ENST00000543199 TMEM74BQ9NUR3 256 aa13.55□□□□□ -0.24
GPN3-203ENST00000543199 CGNQ9P2M7 1197 aaKnown RBP13.55□□□□□ -0.24
GPN3-203ENST00000543199 MBD1Q9UIS9 605 aaPredicted RBP13.55□□□□□ -0.24
GPN3-203ENST00000543199 A0A0A0MRY4 1105 aa13.54□□□□□ -0.24
GPN3-203ENST00000543199 PVALEFA0A1B0GWK0 134 aa13.54□□□□□ -0.24
GPN3-203ENST00000543199 C1QTNF9BB2RNN3 333 aa13.54□□□□□ -0.24
GPN3-203ENST00000543199 TRIM24O15164 1050 aa13.54□□□□□ -0.24
GPN3-203ENST00000543199 TULP3O75386 442 aa13.54□□□□□ -0.24
GPN3-203ENST00000543199 BEST1O76090 585 aa13.54□□□□□ -0.24
GPN3-203ENST00000543199 VNN1O95497 513 aa13.54□□□□□ -0.24
GPN3-203ENST00000543199 C1QTNF9P0C862 333 aa13.54□□□□□ -0.24
GPN3-203ENST00000543199 SPINK2P20155 84 aa13.54□□□□□ -0.24
GPN3-203ENST00000543199 MAPK8P45983 427 aa13.54□□□□□ -0.24
GPN3-203ENST00000543199 ME1P48163 572 aa13.54□□□□□ -0.24
GPN3-203ENST00000543199 PGFP49763 221 aa13.54□□□□□ -0.24
GPN3-203ENST00000543199 TUBP50607 506 aa13.54□□□□□ -0.24
GPN3-203ENST00000543199 C10orf76Q5T2E6 689 aa13.54□□□□□ -0.24
GPN3-203ENST00000543199 TMEM25Q86YD3 366 aa13.54□□□□□ -0.24
GPN3-203ENST00000543199 FUKQ8N0W3 1084 aa13.54□□□□□ -0.24
GPN3-203ENST00000543199 PARD3BQ8TEW8 1205 aa13.54□□□□□ -0.24
GPN3-203ENST00000543199 SPHK2Q9NRA0 654 aa13.54□□□□□ -0.24
GPN3-203ENST00000543199 FAM49BQ9NUQ9 324 aa13.54□□□□□ -0.24
GPN3-203ENST00000543199 FAM13BQ9NYF5 915 aa13.54□□□□□ -0.24
GPN3-203ENST00000543199 DEC1Q9P2X7 70 aa13.54□□□□□ -0.24
GPN3-203ENST00000543199 HMGXB4Q9UGU5 601 aa13.54□□□□□ -0.24
GPN3-203ENST00000543199 PCDHA7Q9UN72 937 aa13.54□□□□□ -0.24
GPN3-203ENST00000543199 HOXC11O43248 304 aaPredicted RBP13.53□□□□□ -0.24
GPN3-203ENST00000543199 TLR5O60602 858 aa13.53□□□□□ -0.24
GPN3-203ENST00000543199 C4BPAP04003 597 aaKnown RBP13.53□□□□□ -0.24
GPN3-203ENST00000543199 ZDHHC11BP0C7U3 371 aa13.53□□□□□ -0.24
GPN3-203ENST00000543199 WASP42768 502 aa13.53□□□□□ -0.24
GPN3-203ENST00000543199 DLG4P78352 724 aa13.53□□□□□ -0.24
GPN3-203ENST00000543199 MAP7D1Q3KQU3 841 aa13.53□□□□□ -0.24
GPN3-203ENST00000543199 SNX30Q5VWJ9 437 aa13.53□□□□□ -0.24
GPN3-203ENST00000543199 DEFB119Q8N690 84 aa13.53□□□□□ -0.24
GPN3-203ENST00000543199 DEFB124Q8NES8 71 aa13.53□□□□□ -0.24
GPN3-203ENST00000543199 ZMIZ2Q8NF64 920 aa13.53□□□□□ -0.24
GPN3-203ENST00000543199 GOLGA5Q8TBA6 731 aa13.53□□□□□ -0.24
GPN3-203ENST00000543199 SLC2A14Q8TDB8 520 aa13.53□□□□□ -0.24
GPN3-203ENST00000543199 ERLEC1Q96DZ1 483 aa13.53□□□□□ -0.24
GPN3-203ENST00000543199 SMOQ99835 787 aa13.53□□□□□ -0.24
GPN3-203ENST00000543199 NUSAP1Q9BXS6 441 aaKnown RBP13.53□□□□□ -0.24
GPN3-203ENST00000543199 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.53□□□□□ -0.242e-6■■■■■ 96.1
GPN3-203ENST00000543199 IL37Q9NZH6 218 aa13.53□□□□□ -0.24
GPN3-203ENST00000543199 FAM92AA1XBS5 289 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms