RNA–Protein interactions for RNA: ENST00000543091.1

LRP6-206, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best) BASIC

Gene LRP6, Length 4,774 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-206ENST00000543091 RARGP13631 454 aa8.1□□□□□ -1.11
LRP6-206ENST00000543091 KRT15P19012 456 aa8.1□□□□□ -1.11
LRP6-206ENST00000543091 PLA2G4AP47712 749 aa8.1□□□□□ -1.11
LRP6-206ENST00000543091 PPP3CCP48454 512 aa8.1□□□□□ -1.11
LRP6-206ENST00000543091 SLC11A1P49279 550 aa8.1□□□□□ -1.11
LRP6-206ENST00000543091 DDR2Q16832 855 aa8.1□□□□□ -1.11
LRP6-206ENST00000543091 ZC3H18Q86VM9 953 aaKnown RBP8.1□□□□□ -1.11
LRP6-206ENST00000543091 CARNMT1Q8N4J0 409 aa8.1□□□□□ -1.11
LRP6-206ENST00000543091 EMC1Q8N766 993 aa8.1□□□□□ -1.11
LRP6-206ENST00000543091 RMDN1Q96DB5 314 aa8.1□□□□□ -1.11
LRP6-206ENST00000543091 PAIP2Q9BPZ3 127 aaKnown RBP8.1□□□□□ -1.11
LRP6-206ENST00000543091 TKTP29401 623 aaKnown RBP8.1□□□□□ -1.11
LRP6-206ENST00000543091 PMLP29590 882 aa8.1□□□□□ -1.11
LRP6-206ENST00000543091 C2CD6Q53TS8 623 aa8.1□□□□□ -1.11
LRP6-206ENST00000543091 CENPUQ71F23 418 aa8.1□□□□□ -1.11
LRP6-206ENST00000543091 SEMA4DQ92854 862 aa8.1□□□□□ -1.11
LRP6-206ENST00000543091 BHMTQ93088 406 aa8.1□□□□□ -1.11
LRP6-206ENST00000543091 WNT8BQ93098 351 aa8.1□□□□□ -1.11
LRP6-206ENST00000543091 VPS28Q9UK41 221 aa8.1□□□□□ -1.11
LRP6-206ENST00000543091 COQ4Q9Y3A0 265 aa8.1□□□□□ -1.11
LRP6-206ENST00000543091 C3orf70A6NLC5 250 aaPredicted RBP8.1□□□□□ -1.11
LRP6-206ENST00000543091 ALDH3A1P30838 453 aa8.1□□□□□ -1.11
LRP6-206ENST00000543091 CAV1Q03135 178 aa8.1□□□□□ -1.11
LRP6-206ENST00000543091 LAMB3Q13751 1172 aa8.1□□□□□ -1.11
LRP6-206ENST00000543091 MAP3K21Q5TCX8 1036 aa8.1□□□□□ -1.11
LRP6-206ENST00000543091 CASP10Q92851 521 aa8.1□□□□□ -1.11
LRP6-206ENST00000543091 CIPCQ9C0C6 399 aa8.1□□□□□ -1.11
LRP6-206ENST00000543091 KLHL11Q9NVR0 708 aa8.1□□□□□ -1.11
LRP6-206ENST00000543091 USP18Q9UMW8 372 aa8.1□□□□□ -1.11
LRP6-206ENST00000543091 FNDC3AQ9Y2H6 1198 aaKnown RBP8.1□□□□□ -1.11
LRP6-206ENST00000543091 ZNF510Q9Y2H8 683 aa8.1□□□□□ -1.11
LRP6-206ENST00000543091 TELO2Q9Y4R8 837 aa8.1□□□□□ -1.11
LRP6-206ENST00000543091 BUB1BO60566 1050 aaPredicted RBP8.09□□□□□ -1.11
LRP6-206ENST00000543091 CST8O60676 142 aa8.09□□□□□ -1.11
LRP6-206ENST00000543091 LUC7L3O95232 432 aaKnown RBP8.09□□□□□ -1.11
LRP6-206ENST00000543091 TRUB2O95900 331 aaKnown RBP8.09□□□□□ -1.11
LRP6-206ENST00000543091 SOD2P04179 222 aa8.09□□□□□ -1.11
LRP6-206ENST00000543091 ARL4CP56559 192 aa8.09□□□□□ -1.11
LRP6-206ENST00000543091 MLLT1Q03111 559 aaPredicted RBP8.09□□□□□ -1.11
LRP6-206ENST00000543091 KCNMA1Q12791 1236 aa8.09□□□□□ -1.11
LRP6-206ENST00000543091 ELF2Q15723 593 aa8.09□□□□□ -1.11
LRP6-206ENST00000543091 SMTNL2Q2TAL5 461 aa8.09□□□□□ -1.11
LRP6-206ENST00000543091 BBS9Q3SYG4 887 aa8.09□□□□□ -1.11
LRP6-206ENST00000543091 GLE1Q53GS7 698 aaKnown RBP8.09□□□□□ -1.11
LRP6-206ENST00000543091 PPP1R26Q5T8A7 1209 aaPredicted RBP8.09□□□□□ -1.11
LRP6-206ENST00000543091 TIGD7Q6NT04 549 aaPredicted RBP8.09□□□□□ -1.11
LRP6-206ENST00000543091 C4orf22Q6V702 233 aa8.09□□□□□ -1.11
LRP6-206ENST00000543091 LZTR1Q8N653 840 aa8.09□□□□□ -1.11
LRP6-206ENST00000543091 TPCN2Q8NHX9 752 aa8.09□□□□□ -1.11
LRP6-206ENST00000543091 KRT35Q92764 455 aa8.09□□□□□ -1.11
LRP6-206ENST00000543091 HNRNPABQ99729 332 aaKnown RBP8.09□□□□□ -1.11
LRP6-206ENST00000543091 APOL5Q9BWW9 433 aa8.09□□□□□ -1.11
LRP6-206ENST00000543091 GPR88Q9GZN0 384 aa8.09□□□□□ -1.11
LRP6-206ENST00000543091 LHX5Q9H2C1 402 aa8.09□□□□□ -1.11
LRP6-206ENST00000543091 MFSD1Q9H3U5 465 aa8.09□□□□□ -1.11
LRP6-206ENST00000543091 NRDE2Q9H7Z3 1164 aa8.09□□□□□ -1.11
LRP6-206ENST00000543091 KCNK9Q9NPC2 374 aa8.09□□□□□ -1.11
LRP6-206ENST00000543091 PAK6Q9NQU5 681 aaPredicted RBP8.09□□□□□ -1.11
LRP6-206ENST00000543091 PDLIM7Q9NR12 457 aa8.09□□□□□ -1.11
LRP6-206ENST00000543091 C9IYK1 514 aa8.09□□□□□ -1.11
LRP6-206ENST00000543091 SYNCRIPO60506 623 aaKnown RBP8.09□□□□□ -1.11
LRP6-206ENST00000543091 TLR5O60602 858 aa8.09□□□□□ -1.11
LRP6-206ENST00000543091 SPATA31D3P0C874 917 aa8.09□□□□□ -1.11
LRP6-206ENST00000543091 HOXD8P13378 290 aaPredicted RBP8.09□□□□□ -1.11
LRP6-206ENST00000543091 LRPAP1P30533 357 aa8.09□□□□□ -1.11
LRP6-206ENST00000543091 PLTPP55058 493 aa8.09□□□□□ -1.11
LRP6-206ENST00000543091 CCZ1BP86790 482 aa8.09□□□□□ -1.11
LRP6-206ENST00000543091 CCZ1P86791 482 aaPredicted RBP8.09□□□□□ -1.11
LRP6-206ENST00000543091 APBA1Q02410 837 aa8.09□□□□□ -1.11
LRP6-206ENST00000543091 TRIP13Q15645 432 aaPredicted RBP8.09□□□□□ -1.11
LRP6-206ENST00000543091 PLEKHG4Q58EX7 1191 aa8.09□□□□□ -1.11
LRP6-206ENST00000543091 C6orf118Q5T5N4 469 aa8.09□□□□□ -1.11
LRP6-206ENST00000543091 SPATA31D4Q6ZUB0 917 aa8.09□□□□□ -1.11
LRP6-206ENST00000543091 TMEM192Q8IY95 271 aa8.09□□□□□ -1.11
LRP6-206ENST00000543091 ATL2Q8NHH9 583 aa8.09□□□□□ -1.11
LRP6-206ENST00000543091 IGSF21Q96ID5 467 aa8.09□□□□□ -1.11
LRP6-206ENST00000543091 CINPQ9BW66 212 aaPredicted RBP8.09□□□□□ -1.11
LRP6-206ENST00000543091 FRMD8P1Q9BZ68 369 aaPredicted RBP8.09□□□□□ -1.11
LRP6-206ENST00000543091 CYLDQ9NQC7 956 aa8.09□□□□□ -1.11
LRP6-206ENST00000543091 ECM29Q5VYK3 1845 aa8.09□□□□□ -1.11
LRP6-206ENST00000543091 A6NNZ2 444 aa8.09□□□□□ -1.11
LRP6-206ENST00000543091 NCK2O43639 380 aa8.09□□□□□ -1.11
LRP6-206ENST00000543091 ERBB2P04626 1255 aa8.09□□□□□ -1.11
LRP6-206ENST00000543091 GALTP07902 379 aa8.09□□□□□ -1.11
LRP6-206ENST00000543091 OR4Q2P0C623 313 aa8.09□□□□□ -1.11
LRP6-206ENST00000543091 SLMAPQ14BN4 828 aa8.09□□□□□ -1.11
LRP6-206ENST00000543091 TUBB8Q3ZCM7 444 aa8.09□□□□□ -1.11
LRP6-206ENST00000543091 PRSS55Q6UWB4 352 aaPredicted RBP8.09□□□□□ -1.11
LRP6-206ENST00000543091 AGMOQ6ZNB7 445 aa8.09□□□□□ -1.11
LRP6-206ENST00000543091 CARD9Q9H257 536 aa8.09□□□□□ -1.11
LRP6-206ENST00000543091 SIGLEC16A6NMB1 481 aa8.09□□□□□ -1.12
LRP6-206ENST00000543091 O00370 1275 aa8.09□□□□□ -1.12
LRP6-206ENST00000543091 CLDN5O00501 218 aa8.09□□□□□ -1.12
LRP6-206ENST00000543091 DDX3XO00571 662 aaKnown RBP eCLIP8.09□□□□□ -1.121e-24■■■□□ 16.2
LRP6-206ENST00000543091 NCAM2O15394 837 aa8.09□□□□□ -1.12
LRP6-206ENST00000543091 SMAD3P84022 425 aaKnown RBP8.09□□□□□ -1.12
LRP6-206ENST00000543091 TWF1Q12792 350 aa8.09□□□□□ -1.12
LRP6-206ENST00000543091 GPR158Q5T848 1215 aa8.09□□□□□ -1.12
LRP6-206ENST00000543091 IRF2BP1Q8IU81 584 aa8.09□□□□□ -1.12
LRP6-206ENST00000543091 C12orf29Q8N999 325 aa8.09□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms