RNA–Protein interactions for RNA: ENST00000542244.5

DDX11-220, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 1 (best)

Gene DDX11, Length 1,193 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-220ENST00000542244 SGSM1Q2NKQ1 1148 aa21.05■□□□□ 0.96
DDX11-220ENST00000542244 SNX30Q5VWJ9 437 aa21.05■□□□□ 0.96
DDX11-220ENST00000542244 RASSF3Q86WH2 238 aa21.05■□□□□ 0.96
DDX11-220ENST00000542244 TTC30AQ86WT1 665 aa21.05■□□□□ 0.96
DDX11-220ENST00000542244 TMEM25Q86YD3 366 aa21.05■□□□□ 0.96
DDX11-220ENST00000542244 TXNDC5Q8NBS9 432 aaKnown RBP21.05■□□□□ 0.96
DDX11-220ENST00000542244 RLN3Q8WXF3 142 aa21.05■□□□□ 0.96
DDX11-220ENST00000542244 EEF2KMTQ96G04 330 aa21.05■□□□□ 0.96
DDX11-220ENST00000542244 PNKPQ96T60 521 aa21.05■□□□□ 0.96
DDX11-220ENST00000542244 GDPD2Q9HCC8 539 aa21.05■□□□□ 0.96
DDX11-220ENST00000542244 CSNK1G1Q9HCP0 422 aa21.05■□□□□ 0.96
DDX11-220ENST00000542244 TRAF3IP3Q9Y228 551 aa21.05■□□□□ 0.96
DDX11-220ENST00000542244 FAM237AA0A1B0GTK4 181 aa21.04■□□□□ 0.96
DDX11-220ENST00000542244 MDM4O15151 490 aa21.04■□□□□ 0.96
DDX11-220ENST00000542244 KAT7O95251 611 aa21.04■□□□□ 0.96
DDX11-220ENST00000542244 PIK3CAP42336 1068 aa21.04■□□□□ 0.96
DDX11-220ENST00000542244 SYKP43405 635 aa21.04■□□□□ 0.96
DDX11-220ENST00000542244 VAMP7P51809 220 aa21.04■□□□□ 0.96
DDX11-220ENST00000542244 CRY1Q16526 586 aa21.04■□□□□ 0.96
DDX11-220ENST00000542244 C12orf50Q8NA57 414 aaPredicted RBP21.04■□□□□ 0.96
DDX11-220ENST00000542244 OVCA2Q8WZ82 227 aa21.04■□□□□ 0.96
DDX11-220ENST00000542244 TNIP3Q96KP6 325 aa21.04■□□□□ 0.96
DDX11-220ENST00000542244 MMRN2Q9H8L6 949 aa21.04■□□□□ 0.96
DDX11-220ENST00000542244 NMUR1Q9HB89 426 aa21.04■□□□□ 0.96
DDX11-220ENST00000542244 NUDT5Q9UKK9 219 aa21.04■□□□□ 0.96
DDX11-220ENST00000542244 ABCA7Q8IZY2 2146 aa21.04■□□□□ 0.96
DDX11-220ENST00000542244 E2F8A0AVK6 867 aa21.03■□□□□ 0.96
DDX11-220ENST00000542244 PATE3B3GLJ2 98 aa21.03■□□□□ 0.96
DDX11-220ENST00000542244 CYP26A1O43174 497 aa21.03■□□□□ 0.96
DDX11-220ENST00000542244 RHOBTB3O94955 611 aa21.03■□□□□ 0.96
DDX11-220ENST00000542244 GBP1P32455 592 aa21.03■□□□□ 0.96
DDX11-220ENST00000542244 CREB5Q02930 508 aa21.03■□□□□ 0.96
DDX11-220ENST00000542244 STPG1Q5TH74 334 aa21.03■□□□□ 0.96
DDX11-220ENST00000542244 CLEC20AQ6ZU45 233 aa21.03■□□□□ 0.96
DDX11-220ENST00000542244 MIB1Q86YT6 1006 aa21.03■□□□□ 0.96
DDX11-220ENST00000542244 ETFBKMTQ8IXQ9 262 aa21.03■□□□□ 0.96
DDX11-220ENST00000542244 SMYD4Q8IYR2 804 aaPredicted RBP21.03■□□□□ 0.96
DDX11-220ENST00000542244 PDZD8Q8NEN9 1154 aa21.03■□□□□ 0.96
DDX11-220ENST00000542244 EXOC4Q96A65 974 aa21.03■□□□□ 0.96
DDX11-220ENST00000542244 ERLEC1Q96DZ1 483 aa21.03■□□□□ 0.96
DDX11-220ENST00000542244 ARHGEF4Q9NR80 690 aa21.03■□□□□ 0.96
DDX11-220ENST00000542244 ATP8B3O60423 1300 aa21.03■□□□□ 0.96
DDX11-220ENST00000542244 A0A0A0MRY4 1105 aa21.02■□□□□ 0.96
DDX11-220ENST00000542244 BCLAF3A2AJT9 711 aaKnown RBP21.02■□□□□ 0.96
DDX11-220ENST00000542244 SLC9A3R1O14745 358 aaPredicted RBP21.02■□□□□ 0.96
DDX11-220ENST00000542244 NR2F2P24468 414 aa21.02■□□□□ 0.96
DDX11-220ENST00000542244 SEMA4DQ92854 862 aa21.02■□□□□ 0.96
DDX11-220ENST00000542244 CNOT6LQ96LI5 555 aaKnown RBP21.02■□□□□ 0.96
DDX11-220ENST00000542244 KLF16Q9BXK1 252 aaPredicted RBP21.02■□□□□ 0.96
DDX11-220ENST00000542244 USP25Q9UHP3 1055 aa21.02■□□□□ 0.96
DDX11-220ENST00000542244 MBD1Q9UIS9 605 aaPredicted RBP21.02■□□□□ 0.96
DDX11-220ENST00000542244 IKBKBO14920 756 aa21.01■□□□□ 0.95
DDX11-220ENST00000542244 CALUO43852 315 aaPredicted RBP21.01■□□□□ 0.95
DDX11-220ENST00000542244 TLR5O60602 858 aa21.01■□□□□ 0.95
DDX11-220ENST00000542244 ADH1CP00326 375 aa21.01■□□□□ 0.95
DDX11-220ENST00000542244 APODP05090 189 aa21.01■□□□□ 0.95
DDX11-220ENST00000542244 CD58P19256 250 aa21.01■□□□□ 0.95
DDX11-220ENST00000542244 LIMK1P53667 647 aa21.01■□□□□ 0.95
DDX11-220ENST00000542244 MRPS21P82921 87 aaKnown RBP21.01■□□□□ 0.95
DDX11-220ENST00000542244 INCA1Q0VD86 236 aa21.01■□□□□ 0.95
DDX11-220ENST00000542244 PMS2CLQ68D20 193 aa21.01■□□□□ 0.95
DDX11-220ENST00000542244 KRBA2Q6ZNG9 492 aa21.01■□□□□ 0.95
DDX11-220ENST00000542244 UNC93AQ86WB7 457 aa21.01■□□□□ 0.95
DDX11-220ENST00000542244 KIAA1958Q8N8K9 716 aa21.01■□□□□ 0.95
DDX11-220ENST00000542244 OLIG1Q8TAK6 271 aa21.01■□□□□ 0.95
DDX11-220ENST00000542244 FRMD4BQ9Y2L6 1034 aa21.01■□□□□ 0.95
DDX11-220ENST00000542244 SH3BP1Q9Y3L3 701 aa21.01■□□□□ 0.95
DDX11-220ENST00000542244 PCDHGA5Q9Y5G8 931 aa21.01■□□□□ 0.95
DDX11-220ENST00000542244 A0A1W2PQH9 124 aa21■□□□□ 0.95
DDX11-220ENST00000542244 TULP3O75386 442 aa21■□□□□ 0.95
DDX11-220ENST00000542244 CAVIN2O95810 425 aa21■□□□□ 0.95
DDX11-220ENST00000542244 GRIA2P42262 883 aa21■□□□□ 0.95
DDX11-220ENST00000542244 WASP42768 502 aa21■□□□□ 0.95
DDX11-220ENST00000542244 TUBP50607 506 aa21■□□□□ 0.95
DDX11-220ENST00000542244 KRT85P78386 507 aa21■□□□□ 0.95
DDX11-220ENST00000542244 ZCWPW2Q504Y3 356 aa21■□□□□ 0.95
DDX11-220ENST00000542244 N4BP2L1Q5TBK1 243 aaPredicted RBP21■□□□□ 0.95
DDX11-220ENST00000542244 SCD5Q86SK9 330 aa21■□□□□ 0.95
DDX11-220ENST00000542244 DDX42Q86XP3 938 aaKnown RBP eCLIP21■□□□□ 0.95
DDX11-220ENST00000542244 FAM186BQ8IYM0 893 aa21■□□□□ 0.95
DDX11-220ENST00000542244 TAF4BQ92750 862 aa21■□□□□ 0.95
DDX11-220ENST00000542244 CYFIP2Q96F07 1278 aa21■□□□□ 0.95
DDX11-220ENST00000542244 HNRNPABQ99729 332 aaKnown RBP21■□□□□ 0.95
DDX11-220ENST00000542244 SPHK2Q9NRA0 654 aa21■□□□□ 0.95
DDX11-220ENST00000542244 VPS45Q9NRW7 570 aa21■□□□□ 0.95
DDX11-220ENST00000542244 TBC1D14Q9P2M4 693 aa21■□□□□ 0.95
DDX11-220ENST00000542244 HOXC11O43248 304 aaPredicted RBP20.99■□□□□ 0.95
DDX11-220ENST00000542244 FAM200BP0CF97 657 aa20.99■□□□□ 0.95
DDX11-220ENST00000542244 P4HA1P13674 534 aa20.99■□□□□ 0.95
DDX11-220ENST00000542244 EIF2DP41214 584 aaKnown RBP20.99■□□□□ 0.95
DDX11-220ENST00000542244 GAD2Q05329 585 aa20.99■□□□□ 0.95
DDX11-220ENST00000542244 ELF2Q15723 593 aa20.99■□□□□ 0.95
DDX11-220ENST00000542244 ANO4Q32M45 955 aa20.99■□□□□ 0.95
DDX11-220ENST00000542244 ZNF394Q53GI3 561 aa20.99■□□□□ 0.95
DDX11-220ENST00000542244 IL31Q6EBC2 164 aa20.99■□□□□ 0.95
DDX11-220ENST00000542244 ACOX2Q99424 681 aa20.99■□□□□ 0.95
DDX11-220ENST00000542244 ARID3AQ99856 593 aa20.99■□□□□ 0.95
DDX11-220ENST00000542244 COMMD8Q9NX08 183 aa20.99■□□□□ 0.95
DDX11-220ENST00000542244 LAMA1P25391 3075 aa20.99■□□□□ 0.95
DDX11-220ENST00000542244 GIPC1O14908 333 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms