RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 PDGFCQ9NRA1 345 aa15.95■□□□□ 0.14
CNOT9-208ENST00000542068 NR2E3Q9Y5X4 410 aa15.95■□□□□ 0.14
CNOT9-208ENST00000542068 LIN7AO14910 233 aaPredicted RBP15.95■□□□□ 0.14
CNOT9-208ENST00000542068 FARP2O94887 1054 aaPredicted RBP15.95■□□□□ 0.14
CNOT9-208ENST00000542068 ARIH2O95376 493 aa15.95■□□□□ 0.14
CNOT9-208ENST00000542068 LMNAP02545 664 aaKnown RBP15.95■□□□□ 0.14
CNOT9-208ENST00000542068 ITGB3P05106 788 aa15.95■□□□□ 0.14
CNOT9-208ENST00000542068 APRTP07741 180 aa15.95■□□□□ 0.14
CNOT9-208ENST00000542068 DLDP09622 509 aaKnown RBP15.95■□□□□ 0.14
CNOT9-208ENST00000542068 KDELR1P24390 212 aa15.95■□□□□ 0.14
CNOT9-208ENST00000542068 CDH6P55285 790 aa15.95■□□□□ 0.14
CNOT9-208ENST00000542068 BST1Q10588 318 aa15.95■□□□□ 0.14
CNOT9-208ENST00000542068 DPYSL3Q14195 570 aa15.95■□□□□ 0.14
CNOT9-208ENST00000542068 PIGHQ14442 188 aaPredicted RBP15.95■□□□□ 0.14
CNOT9-208ENST00000542068 HADHQ16836 314 aaKnown RBP15.95■□□□□ 0.14
CNOT9-208ENST00000542068 EFCAB12Q6NXP0 572 aa15.95■□□□□ 0.14
CNOT9-208ENST00000542068 XRRA1Q6P2D8 792 aa15.95■□□□□ 0.14
CNOT9-208ENST00000542068 C7orf31Q8N865 590 aa15.95■□□□□ 0.14
CNOT9-208ENST00000542068 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.95■□□□□ 0.14
CNOT9-208ENST00000542068 ANKRD36BP1Q96IX9 119 aa15.95■□□□□ 0.14
CNOT9-208ENST00000542068 VCPIP1Q96JH7 1222 aa15.95■□□□□ 0.14
CNOT9-208ENST00000542068 GBP5Q96PP8 586 aa15.95■□□□□ 0.14
CNOT9-208ENST00000542068 VPS11Q9H270 941 aa15.95■□□□□ 0.14
CNOT9-208ENST00000542068 MTO1Q9Y2Z2 717 aaKnown RBP15.95■□□□□ 0.14
CNOT9-208ENST00000542068 TXNP10599 105 aaKnown RBP15.95■□□□□ 0.14
CNOT9-208ENST00000542068 TGFB2P61812 414 aa15.95■□□□□ 0.14
CNOT9-208ENST00000542068 MCL1Q07820 350 aa15.95■□□□□ 0.14
CNOT9-208ENST00000542068 KCTD2Q14681 263 aa15.95■□□□□ 0.14
CNOT9-208ENST00000542068 ZNF667Q5HYK9 610 aa15.95■□□□□ 0.14
CNOT9-208ENST00000542068 CFAP157Q5JU67 520 aa15.95■□□□□ 0.14
CNOT9-208ENST00000542068 NIF3L1Q9GZT8 377 aa15.95■□□□□ 0.14
CNOT9-208ENST00000542068 NGRNQ9NPE2 291 aaKnown RBP15.95■□□□□ 0.14
CNOT9-208ENST00000542068 LRCH1Q9Y2L9 728 aa15.95■□□□□ 0.14
CNOT9-208ENST00000542068 A0A1B0GVG6 124 aa15.94■□□□□ 0.14
CNOT9-208ENST00000542068 E7ENQ6 273 aa15.94■□□□□ 0.14
CNOT9-208ENST00000542068 M0QYV0 167 aa15.94■□□□□ 0.14
CNOT9-208ENST00000542068 VTNP04004 478 aa15.94■□□□□ 0.14
CNOT9-208ENST00000542068 ETS2P15036 469 aa15.94■□□□□ 0.14
CNOT9-208ENST00000542068 RASIP1Q5U651 963 aa15.94■□□□□ 0.14
CNOT9-208ENST00000542068 C16orf46Q6P387 395 aa15.94■□□□□ 0.14
CNOT9-208ENST00000542068 SH3TC2Q8TF17 1288 aa15.94■□□□□ 0.14
CNOT9-208ENST00000542068 ASCC2Q9H1I8 757 aaPredicted RBP15.94■□□□□ 0.14
CNOT9-208ENST00000542068 RPF1Q9H9Y2 349 aaKnown RBP15.94■□□□□ 0.14
CNOT9-208ENST00000542068 CYTH4Q9UIA0 394 aa15.94■□□□□ 0.14
CNOT9-208ENST00000542068 LNPEPQ9UIQ6 1025 aa15.94■□□□□ 0.14
CNOT9-208ENST00000542068 SYNJ2BP-COX16A0A087WUM0 186 aa15.94■□□□□ 0.14
CNOT9-208ENST00000542068 TM9SF1O15321 606 aa15.94■□□□□ 0.14
CNOT9-208ENST00000542068 KCNN4O15554 427 aa15.94■□□□□ 0.14
CNOT9-208ENST00000542068 MIPP30301 263 aa15.94■□□□□ 0.14
CNOT9-208ENST00000542068 ZNF280AP59817 542 aaPredicted RBP15.94■□□□□ 0.14
CNOT9-208ENST00000542068 MAP3K10Q02779 954 aa15.94■□□□□ 0.14
CNOT9-208ENST00000542068 PEX6Q13608 980 aa15.94■□□□□ 0.14
CNOT9-208ENST00000542068 ZRSR2Q15696 482 aaKnown RBP15.94■□□□□ 0.14
CNOT9-208ENST00000542068 AMHR2Q16671 573 aa15.94■□□□□ 0.14
CNOT9-208ENST00000542068 OR6B2Q6IFH4 312 aa15.94■□□□□ 0.14
CNOT9-208ENST00000542068 PCGF5Q86SE9 256 aa15.94■□□□□ 0.14
CNOT9-208ENST00000542068 RSPH3Q86UC2 560 aa15.94■□□□□ 0.14
CNOT9-208ENST00000542068 APOBEC3FQ8IUX4 373 aaKnown RBP15.94■□□□□ 0.14
CNOT9-208ENST00000542068 NUDCD3Q8IVD9 361 aa15.94■□□□□ 0.14
CNOT9-208ENST00000542068 NLGN2Q8NFZ4 835 aa15.94■□□□□ 0.14
CNOT9-208ENST00000542068 CCDC110Q8TBZ0 833 aa15.94■□□□□ 0.14
CNOT9-208ENST00000542068 FGD4Q96M96 766 aa15.94■□□□□ 0.14
CNOT9-208ENST00000542068 PCYT2Q99447 389 aa15.94■□□□□ 0.14
CNOT9-208ENST00000542068 EBF4Q9BQW3 602 aa15.94■□□□□ 0.14
CNOT9-208ENST00000542068 SPATC1LQ9H0A9 340 aa15.94■□□□□ 0.14
CNOT9-208ENST00000542068 DDX56Q9NY93 547 aaKnown RBP15.94■□□□□ 0.14
CNOT9-208ENST00000542068 COX16Q9P0S2 106 aa15.94■□□□□ 0.14
CNOT9-208ENST00000542068 CPSF2Q9P2I0 782 aaKnown RBP15.94■□□□□ 0.14
CNOT9-208ENST00000542068 SLC17A6Q9P2U8 582 aa15.94■□□□□ 0.14
CNOT9-208ENST00000542068 PACSIN3Q9UKS6 424 aa15.94■□□□□ 0.14
CNOT9-208ENST00000542068 DOCK5Q9H7D0 1870 aa15.94■□□□□ 0.14
CNOT9-208ENST00000542068 SOWAHBA6NEL2 793 aa15.93■□□□□ 0.14
CNOT9-208ENST00000542068 DCAF8L1A6NGE4 600 aa15.93■□□□□ 0.14
CNOT9-208ENST00000542068 TRAFD1O14545 582 aaPredicted RBP15.93■□□□□ 0.14
CNOT9-208ENST00000542068 CIB2O75838 187 aa15.93■□□□□ 0.14
CNOT9-208ENST00000542068 RPS12P25398 132 aaKnown RBP15.93■□□□□ 0.14
CNOT9-208ENST00000542068 GMPRP36959 345 aa15.93■□□□□ 0.14
CNOT9-208ENST00000542068 RBBP5Q15291 538 aaKnown RBP15.93■□□□□ 0.14
CNOT9-208ENST00000542068 C15orf59Q2T9L4 293 aaPredicted RBP15.93■□□□□ 0.14
CNOT9-208ENST00000542068 FAM102AQ5T9C2 384 aaPredicted RBP15.93■□□□□ 0.14
CNOT9-208ENST00000542068 ATF7IP2Q5U623 682 aa15.93■□□□□ 0.14
CNOT9-208ENST00000542068 RIPOR1Q6ZS17 1223 aa15.93■□□□□ 0.14
CNOT9-208ENST00000542068 SESTD1Q86VW0 696 aa15.93■□□□□ 0.14
CNOT9-208ENST00000542068 REPS2Q8NFH8 660 aa15.93■□□□□ 0.14
CNOT9-208ENST00000542068 PYDC1Q8WXC3 89 aa15.93■□□□□ 0.14
CNOT9-208ENST00000542068 SKA1Q96BD8 255 aa15.93■□□□□ 0.14
CNOT9-208ENST00000542068 APOPT1Q96IL0 206 aa15.93■□□□□ 0.14
CNOT9-208ENST00000542068 CPXM1Q96SM3 734 aa15.93■□□□□ 0.14
CNOT9-208ENST00000542068 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.93■□□□□ 0.14
CNOT9-208ENST00000542068 SMAPO00193 183 aa15.93■□□□□ 0.14
CNOT9-208ENST00000542068 TXNDC9O14530 226 aa15.93■□□□□ 0.14
CNOT9-208ENST00000542068 SORBS2O94875 1100 aaKnown RBP15.93■□□□□ 0.14
CNOT9-208ENST00000542068 SLC25A3Q00325 362 aa15.93■□□□□ 0.14
CNOT9-208ENST00000542068 PRKD1Q15139 912 aaPredicted RBP15.93■□□□□ 0.14
CNOT9-208ENST00000542068 PPP6R3Q5H9R7 873 aaPredicted RBP15.93■□□□□ 0.14
CNOT9-208ENST00000542068 MZB1Q8WU39 189 aa15.93■□□□□ 0.14
CNOT9-208ENST00000542068 KRT82Q9NSB4 513 aa15.93■□□□□ 0.14
CNOT9-208ENST00000542068 MAFBQ9Y5Q3 323 aaPredicted RBP15.93■□□□□ 0.14
CNOT9-208ENST00000542068 PRR5-ARHGAP8B1AHC4 643 aa15.93■□□□□ 0.14
CNOT9-208ENST00000542068 LYPLA1O75608 230 aaPredicted RBP15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms