RNA–Protein interactions for RNA: ENST00000541819.6

GABRB3-204, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 5,934 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-204ENST00000541819 TPST1O60507 370 aa11.08□□□□□ -0.64
GABRB3-204ENST00000541819 PABPC1P11940 636 aaKnown RBP11.08□□□□□ -0.64
GABRB3-204ENST00000541819 DSG3P32926 999 aa11.08□□□□□ -0.64
GABRB3-204ENST00000541819 SERPINB5P36952 375 aa11.08□□□□□ -0.64
GABRB3-204ENST00000541819 CCNG1P51959 295 aa11.08□□□□□ -0.64
GABRB3-204ENST00000541819 GNA13Q14344 377 aa11.08□□□□□ -0.64
GABRB3-204ENST00000541819 SHC4Q6S5L8 630 aa11.08□□□□□ -0.64
GABRB3-204ENST00000541819 MIB1Q86YT6 1006 aa11.08□□□□□ -0.64
GABRB3-204ENST00000541819 SERAC1Q96JX3 654 aa11.08□□□□□ -0.64
GABRB3-204ENST00000541819 FAM84BQ96KN1 310 aaPredicted RBP11.08□□□□□ -0.64
GABRB3-204ENST00000541819 ANKEF1Q9NU02 776 aa11.08□□□□□ -0.64
GABRB3-204ENST00000541819 FBXO10Q9UK96 956 aa11.08□□□□□ -0.64
GABRB3-204ENST00000541819 DAGLAQ9Y4D2 1042 aa11.08□□□□□ -0.64
GABRB3-204ENST00000541819 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.08□□□□□ -0.64
GABRB3-204ENST00000541819 ALDH9A1P49189 494 aa11.08□□□□□ -0.64
GABRB3-204ENST00000541819 GRIK3Q13003 919 aa11.08□□□□□ -0.64
GABRB3-204ENST00000541819 ADRM1Q16186 407 aa11.08□□□□□ -0.64
GABRB3-204ENST00000541819 ZNF618Q5T7W0 954 aa11.08□□□□□ -0.64
GABRB3-204ENST00000541819 CRAMP1Q96RY5 1269 aa11.08□□□□□ -0.64
GABRB3-204ENST00000541819 RIT2Q99578 217 aa11.08□□□□□ -0.64
GABRB3-204ENST00000541819 PRR12Q9ULL5 1215 aa11.08□□□□□ -0.64
GABRB3-204ENST00000541819 COQ6Q9Y2Z9 468 aa11.08□□□□□ -0.64
GABRB3-204ENST00000541819 CDK12Q9NYV4 1490 aaPredicted RBP11.08□□□□□ -0.64
GABRB3-204ENST00000541819 ATMINO43313 823 aaPredicted RBP11.07□□□□□ -0.64
GABRB3-204ENST00000541819 DNAJC5BQ9UF47 199 aa11.07□□□□□ -0.64
GABRB3-204ENST00000541819 NCKAP1Q9Y2A7 1128 aa11.07□□□□□ -0.64
GABRB3-204ENST00000541819 PDS5AQ29RF7 1337 aaKnown RBP11.07□□□□□ -0.64
GABRB3-204ENST00000541819 FBXO21O94952 628 aa11.07□□□□□ -0.64
GABRB3-204ENST00000541819 OR6A2O95222 327 aa11.07□□□□□ -0.64
GABRB3-204ENST00000541819 FGFR1P11362 822 aa11.07□□□□□ -0.64
GABRB3-204ENST00000541819 YY1P25490 414 aa11.07□□□□□ -0.64
GABRB3-204ENST00000541819 STIP1P31948 543 aaKnown RBP11.07□□□□□ -0.64
GABRB3-204ENST00000541819 VHLP40337 213 aa11.07□□□□□ -0.64
GABRB3-204ENST00000541819 SARSP49591 514 aaKnown RBP11.07□□□□□ -0.64
GABRB3-204ENST00000541819 PEX5P50542 639 aa11.07□□□□□ -0.64
GABRB3-204ENST00000541819 RENBPP51606 427 aa11.07□□□□□ -0.64
GABRB3-204ENST00000541819 INAQ16352 499 aa11.07□□□□□ -0.64
GABRB3-204ENST00000541819 DGKKQ5KSL6 1271 aa11.07□□□□□ -0.64
GABRB3-204ENST00000541819 RSBN1Q5VWQ0 802 aaPredicted RBP11.07□□□□□ -0.64
GABRB3-204ENST00000541819 SGMS1Q86VZ5 419 aa11.07□□□□□ -0.64
GABRB3-204ENST00000541819 DENND6AQ8IWF6 608 aa11.07□□□□□ -0.64
GABRB3-204ENST00000541819 ANKRD13AQ8IZ07 590 aa11.07□□□□□ -0.64
GABRB3-204ENST00000541819 TBC1D16Q8TBP0 767 aa11.07□□□□□ -0.64
GABRB3-204ENST00000541819 CCT8L2Q96SF2 557 aa11.07□□□□□ -0.64
GABRB3-204ENST00000541819 EFCAB1Q9HAE3 211 aa11.07□□□□□ -0.64
GABRB3-204ENST00000541819 FBXL21Q9UKT6 434 aa11.07□□□□□ -0.64
GABRB3-204ENST00000541819 RPS6KL1Q9Y6S9 549 aa11.07□□□□□ -0.64
GABRB3-204ENST00000541819 MORC2Q9Y6X9 1032 aaPredicted RBP11.07□□□□□ -0.64
GABRB3-204ENST00000541819 A0A087X0T9 212 aa11.07□□□□□ -0.64
GABRB3-204ENST00000541819 A0A0G2JLW4 131 aa11.07□□□□□ -0.64
GABRB3-204ENST00000541819 NR5A2O00482 541 aa11.07□□□□□ -0.64
GABRB3-204ENST00000541819 ZC3H11AO75152 810 aaKnown RBP eCLIP11.07□□□□□ -0.64
GABRB3-204ENST00000541819 GLP2RO95838 553 aa11.07□□□□□ -0.64
GABRB3-204ENST00000541819 ACO1P21399 889 aaKnown RBP11.07□□□□□ -0.64
GABRB3-204ENST00000541819 SKP1P63208 163 aa11.07□□□□□ -0.64
GABRB3-204ENST00000541819 PDK2Q15119 407 aa11.07□□□□□ -0.64
GABRB3-204ENST00000541819 AMHR2Q16671 573 aa11.07□□□□□ -0.64
GABRB3-204ENST00000541819 ZNF484Q5JVG2 852 aa11.07□□□□□ -0.64
GABRB3-204ENST00000541819 ARRDC4Q8NCT1 418 aa11.07□□□□□ -0.64
GABRB3-204ENST00000541819 HPS3Q969F9 1004 aa11.07□□□□□ -0.64
GABRB3-204ENST00000541819 FAM120BQ96EK7 910 aaKnown RBP11.07□□□□□ -0.64
GABRB3-204ENST00000541819 MED8Q96G25 268 aa11.07□□□□□ -0.64
GABRB3-204ENST00000541819 REXO4Q9GZR2 422 aaKnown RBP11.07□□□□□ -0.64
GABRB3-204ENST00000541819 GANQ9H2C0 597 aa11.07□□□□□ -0.64
GABRB3-204ENST00000541819 ZNF839A8K0R7 811 aa11.07□□□□□ -0.64
GABRB3-204ENST00000541819 RBP1P09455 135 aa11.07□□□□□ -0.64
GABRB3-204ENST00000541819 COILP38432 576 aaPredicted RBP11.07□□□□□ -0.64
GABRB3-204ENST00000541819 CPA2P48052 419 aa11.07□□□□□ -0.64
GABRB3-204ENST00000541819 RXRGP48443 463 aa11.07□□□□□ -0.64
GABRB3-204ENST00000541819 CYP24A1Q07973 514 aa11.07□□□□□ -0.64
GABRB3-204ENST00000541819 TOMM20Q15388 145 aa11.07□□□□□ -0.64
GABRB3-204ENST00000541819 SLC30A9Q6PML9 568 aa11.07□□□□□ -0.64
GABRB3-204ENST00000541819 ADGRF2Q8IZF7 708 aa11.07□□□□□ -0.64
GABRB3-204ENST00000541819 UXS1Q8NBZ7 420 aa11.07□□□□□ -0.64
GABRB3-204ENST00000541819 SPACA7Q96KW9 195 aa11.07□□□□□ -0.64
GABRB3-204ENST00000541819 KCTD14Q9BQ13 255 aaPredicted RBP11.07□□□□□ -0.64
GABRB3-204ENST00000541819 FICDQ9BVA6 458 aa11.07□□□□□ -0.64
GABRB3-204ENST00000541819 CYB561D2O14569 222 aa11.07□□□□□ -0.64
GABRB3-204ENST00000541819 TM9SF1O15321 606 aa11.07□□□□□ -0.64
GABRB3-204ENST00000541819 MYL4P12829 197 aa11.07□□□□□ -0.64
GABRB3-204ENST00000541819 NME5P56597 212 aa11.07□□□□□ -0.64
GABRB3-204ENST00000541819 CUL2Q13617 745 aa11.07□□□□□ -0.64
GABRB3-204ENST00000541819 TRMT11Q7Z4G4 463 aaKnown RBP11.07□□□□□ -0.64
GABRB3-204ENST00000541819 SLFN11Q7Z7L1 901 aa11.07□□□□□ -0.64
GABRB3-204ENST00000541819 SRLQ86TD4 932 aa11.07□□□□□ -0.64
GABRB3-204ENST00000541819 ELOA2Q8IYF1 753 aaPredicted RBP11.07□□□□□ -0.64
GABRB3-204ENST00000541819 ATG16L2Q8NAA4 619 aa11.07□□□□□ -0.64
GABRB3-204ENST00000541819 MCOLN3Q8TDD5 553 aa11.07□□□□□ -0.64
GABRB3-204ENST00000541819 GPRASP2Q96D09 838 aa11.07□□□□□ -0.64
GABRB3-204ENST00000541819 ZCCHC2Q9C0B9 1178 aaKnown RBP11.07□□□□□ -0.64
GABRB3-204ENST00000541819 DUSP12Q9UNI6 340 aa11.07□□□□□ -0.64
GABRB3-204ENST00000541819 SLC12A8A0AV02 714 aa11.06□□□□□ -0.64
GABRB3-204ENST00000541819 EIF3HO15372 352 aaKnown RBP eCLIP11.06□□□□□ -0.64
GABRB3-204ENST00000541819 HSMCR30P0CW71 290 aa11.06□□□□□ -0.64
GABRB3-204ENST00000541819 FCGR1AP12314 374 aa11.06□□□□□ -0.64
GABRB3-204ENST00000541819 EFEMP1Q12805 493 aa11.06□□□□□ -0.64
GABRB3-204ENST00000541819 MAD2L1Q13257 205 aaPredicted RBP11.06□□□□□ -0.64
GABRB3-204ENST00000541819 ZC2HC1CQ53FD0 456 aaPredicted RBP11.06□□□□□ -0.64
GABRB3-204ENST00000541819 TRIQKQ629K1 86 aa11.06□□□□□ -0.64
GABRB3-204ENST00000541819 ZNF280DQ6N043 979 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms