RNA–Protein interactions for RNA: ENST00000541576.5

THBS3-210, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 3,200 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-210ENST00000541576 ARCQ7LC44 396 aa9.09□□□□□ -0.96
THBS3-210ENST00000541576 OTOP2Q7RTS6 562 aa9.09□□□□□ -0.96
THBS3-210ENST00000541576 ZNF689Q96CS4 500 aaPredicted RBP9.09□□□□□ -0.96
THBS3-210ENST00000541576 B3GALT6Q96L58 329 aa9.09□□□□□ -0.96
THBS3-210ENST00000541576 RAB6CQ9H0N0 254 aa9.09□□□□□ -0.96
THBS3-210ENST00000541576 DDX47Q9H0S4 455 aaKnown RBP9.09□□□□□ -0.96
THBS3-210ENST00000541576 CWH43Q9H720 699 aa9.09□□□□□ -0.96
THBS3-210ENST00000541576 A0A087WUV0 522 aaPredicted RBP9.08□□□□□ -0.96
THBS3-210ENST00000541576 DPYSL4O14531 572 aa9.08□□□□□ -0.96
THBS3-210ENST00000541576 NDUFAB1O14561 156 aa9.08□□□□□ -0.96
THBS3-210ENST00000541576 HSF2BPO75031 334 aa9.08□□□□□ -0.96
THBS3-210ENST00000541576 KIAA0754O94854 1291 aa9.08□□□□□ -0.96
THBS3-210ENST00000541576 FBXO21O94952 628 aa9.08□□□□□ -0.96
THBS3-210ENST00000541576 MYBL2P10244 700 aa9.08□□□□□ -0.96
THBS3-210ENST00000541576 PSEN1P49768 467 aa9.08□□□□□ -0.96
THBS3-210ENST00000541576 NDUFV1P49821 464 aa9.08□□□□□ -0.96
THBS3-210ENST00000541576 MRPS5P82675 430 aaKnown RBP9.08□□□□□ -0.96
THBS3-210ENST00000541576 ADCY1Q08828 1119 aa9.08□□□□□ -0.96
THBS3-210ENST00000541576 MRPL58Q14197 206 aaKnown RBP9.08□□□□□ -0.96
THBS3-210ENST00000541576 NFE2Q16621 373 aaPredicted RBP9.08□□□□□ -0.96
THBS3-210ENST00000541576 SLC13A5Q86YT5 568 aaPredicted RBP9.08□□□□□ -0.96
THBS3-210ENST00000541576 CCDC50Q8IVM0 306 aa9.08□□□□□ -0.96
THBS3-210ENST00000541576 EXD1Q8NHP7 514 aa9.08□□□□□ -0.96
THBS3-210ENST00000541576 BCL7CQ8WUZ0 217 aaPredicted RBP9.08□□□□□ -0.96
THBS3-210ENST00000541576 NDRG1Q92597 394 aaKnown RBP9.08□□□□□ -0.96
THBS3-210ENST00000541576 FAM149B1Q96BN6 582 aa9.08□□□□□ -0.96
THBS3-210ENST00000541576 ACSF2Q96CM8 615 aaPredicted RBP9.08□□□□□ -0.96
THBS3-210ENST00000541576 CFAP57Q96MR6 1250 aa9.08□□□□□ -0.96
THBS3-210ENST00000541576 RUFY1Q96T51 708 aa9.08□□□□□ -0.96
THBS3-210ENST00000541576 KLHL11Q9NVR0 708 aa9.08□□□□□ -0.96
THBS3-210ENST00000541576 PSD3Q9NYI0 1048 aa9.08□□□□□ -0.96
THBS3-210ENST00000541576 GOLGA6L10A0A0M3HER8 536 aa9.08□□□□□ -0.96
THBS3-210ENST00000541576 OR6C75A6NL08 312 aa9.08□□□□□ -0.96
THBS3-210ENST00000541576 CCDC188H7C350 402 aa9.08□□□□□ -0.96
THBS3-210ENST00000541576 SART1O43290 800 aaKnown RBP9.08□□□□□ -0.96
THBS3-210ENST00000541576 GLI1P08151 1106 aa9.08□□□□□ -0.96
THBS3-210ENST00000541576 KRT7P08729 469 aa9.08□□□□□ -0.96
THBS3-210ENST00000541576 IL1R2P27930 398 aa9.08□□□□□ -0.96
THBS3-210ENST00000541576 MIPP30301 263 aa9.08□□□□□ -0.96
THBS3-210ENST00000541576 PCK1P35558 622 aa9.08□□□□□ -0.96
THBS3-210ENST00000541576 ATP11AP98196 1134 aa9.08□□□□□ -0.96
THBS3-210ENST00000541576 SLC25A11Q02978 314 aaKnown RBP9.08□□□□□ -0.96
THBS3-210ENST00000541576 PPIGQ13427 754 aaKnown RBP eCLIP9.08□□□□□ -0.96
THBS3-210ENST00000541576 BTG3Q14201 252 aaPredicted RBP9.08□□□□□ -0.96
THBS3-210ENST00000541576 E2F5Q15329 346 aa9.08□□□□□ -0.96
THBS3-210ENST00000541576 SIX1Q15475 284 aaPredicted RBP9.08□□□□□ -0.96
THBS3-210ENST00000541576 CDO1Q16878 200 aa9.08□□□□□ -0.96
THBS3-210ENST00000541576 C15orf59Q2T9L4 293 aaPredicted RBP9.08□□□□□ -0.96
THBS3-210ENST00000541576 CCDC14Q49A88 953 aa9.08□□□□□ -0.96
THBS3-210ENST00000541576 ODF2Q5BJF6 829 aa9.08□□□□□ -0.96
THBS3-210ENST00000541576 RAB41Q5JT25 222 aa9.08□□□□□ -0.96
THBS3-210ENST00000541576 RTP2Q5QGT7 225 aa9.08□□□□□ -0.96
THBS3-210ENST00000541576 GPRIN1Q7Z2K8 1008 aa9.08□□□□□ -0.96
THBS3-210ENST00000541576 POLNQ7Z5Q5 900 aa9.08□□□□□ -0.96
THBS3-210ENST00000541576 PRELID2Q8N945 189 aa9.08□□□□□ -0.96
THBS3-210ENST00000541576 TTPALQ9BTX7 342 aa9.08□□□□□ -0.96
THBS3-210ENST00000541576 ULBP1Q9BZM6 244 aa9.08□□□□□ -0.96
THBS3-210ENST00000541576 RC3H2Q9HBD1 1191 aaKnown RBP9.08□□□□□ -0.96
THBS3-210ENST00000541576 TARSL2A2RTX5 802 aaKnown RBP9.07□□□□□ -0.96
THBS3-210ENST00000541576 HHLA1C9JL84 531 aa9.07□□□□□ -0.96
THBS3-210ENST00000541576 PI4K2BG5E9Z4 385 aa9.07□□□□□ -0.96
THBS3-210ENST00000541576 RAD51CO43502 376 aa9.07□□□□□ -0.96
THBS3-210ENST00000541576 KRT1P04264 644 aa9.07□□□□□ -0.96
THBS3-210ENST00000541576 RARAP10276 462 aa9.07□□□□□ -0.96
THBS3-210ENST00000541576 PTPRDP23468 1912 aa9.07□□□□□ -0.96
THBS3-210ENST00000541576 COL4A6Q14031 1691 aa9.07□□□□□ -0.96
THBS3-210ENST00000541576 C8orf74Q6P047 294 aa9.07□□□□□ -0.96
THBS3-210ENST00000541576 OTUD6BQ8N6M0 293 aa9.07□□□□□ -0.96
THBS3-210ENST00000541576 RNF25Q96BH1 459 aaPredicted RBP9.07□□□□□ -0.96
THBS3-210ENST00000541576 IGSF21Q96ID5 467 aa9.07□□□□□ -0.96
THBS3-210ENST00000541576 RBM41Q96IZ5 413 aaKnown RBP9.07□□□□□ -0.96
THBS3-210ENST00000541576 ZWILCHQ9H900 591 aa9.07□□□□□ -0.96
THBS3-210ENST00000541576 PNPLA8Q9NP80 782 aa9.07□□□□□ -0.96
THBS3-210ENST00000541576 CNGB3Q9NQW8 809 aa9.07□□□□□ -0.96
THBS3-210ENST00000541576 DDX56Q9NY93 547 aaKnown RBP9.07□□□□□ -0.96
THBS3-210ENST00000541576 ABI2Q9NYB9 513 aaPredicted RBP9.07□□□□□ -0.96
THBS3-210ENST00000541576 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.07□□□□□ -0.96
THBS3-210ENST00000541576 NLRC5Q86WI3 1866 aa9.07□□□□□ -0.96
THBS3-210ENST00000541576 ZSCAN5CA6NGD5 496 aaPredicted RBP9.07□□□□□ -0.96
THBS3-210ENST00000541576 ZBBXA8MT70 800 aa9.07□□□□□ -0.96
THBS3-210ENST00000541576 H7C4K7 107 aa9.07□□□□□ -0.96
THBS3-210ENST00000541576 FSCN2O14926 492 aa9.07□□□□□ -0.96
THBS3-210ENST00000541576 SKAP2O75563 359 aaPredicted RBP9.07□□□□□ -0.96
THBS3-210ENST00000541576 SYF2O95926 243 aaKnown RBP9.07□□□□□ -0.96
THBS3-210ENST00000541576 RPSAP08865 295 aaKnown RBP9.07□□□□□ -0.96
THBS3-210ENST00000541576 CYP2F1P24903 491 aa9.07□□□□□ -0.96
THBS3-210ENST00000541576 GRIK1P39086 918 aa9.07□□□□□ -0.96
THBS3-210ENST00000541576 CETN2P41208 172 aa9.07□□□□□ -0.96
THBS3-210ENST00000541576 PTPN9P43378 593 aa9.07□□□□□ -0.96
THBS3-210ENST00000541576 YWHAZP63104 245 aaKnown RBP9.07□□□□□ -0.96
THBS3-210ENST00000541576 FPGSQ05932 587 aa9.07□□□□□ -0.96
THBS3-210ENST00000541576 TRADDQ15628 312 aa9.07□□□□□ -0.96
THBS3-210ENST00000541576 SMTNL2Q2TAL5 461 aa9.07□□□□□ -0.96
THBS3-210ENST00000541576 WDR93Q6P2C0 686 aa9.07□□□□□ -0.96
THBS3-210ENST00000541576 KCNT2Q6UVM3 1135 aa9.07□□□□□ -0.96
THBS3-210ENST00000541576 ANKS3Q6ZW76 656 aa9.07□□□□□ -0.96
THBS3-210ENST00000541576 C16orf59Q7L2K0 433 aa9.07□□□□□ -0.96
THBS3-210ENST00000541576 CMTR2Q8IYT2 770 aaKnown RBP9.07□□□□□ -0.96
THBS3-210ENST00000541576 RCOR2Q8IZ40 523 aa9.07□□□□□ -0.96
THBS3-210ENST00000541576 FAM172AQ8WUF8 416 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms