RNA–Protein interactions for RNA: ENST00000541562.5

VARS2-211, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,566 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-211ENST00000541562 TSSK1BQ9BXA7 367 aa15.64■□□□□ 0.09
VARS2-211ENST00000541562 IFT122Q9HBG6 1241 aa15.64■□□□□ 0.09
VARS2-211ENST00000541562 CYP4F11Q9HBI6 524 aa15.64■□□□□ 0.09
VARS2-211ENST00000541562 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.64■□□□□ 0.09
VARS2-211ENST00000541562 SIGLEC16A6NMB1 481 aa15.64■□□□□ 0.09
VARS2-211ENST00000541562 DYNC1LI2O43237 492 aaPredicted RBP15.64■□□□□ 0.09
VARS2-211ENST00000541562 BAG2O95816 211 aa15.64■□□□□ 0.09
VARS2-211ENST00000541562 RARBP10826 455 aa15.64■□□□□ 0.09
VARS2-211ENST00000541562 LMNB2Q03252 620 aa15.64■□□□□ 0.09
VARS2-211ENST00000541562 DSTYKQ6XUX3 929 aa15.64■□□□□ 0.09
VARS2-211ENST00000541562 ILDR2Q71H61 639 aa15.64■□□□□ 0.09
VARS2-211ENST00000541562 DPP9Q86TI2 863 aa15.64■□□□□ 0.09
VARS2-211ENST00000541562 VPS52Q8N1B4 723 aa15.64■□□□□ 0.09
VARS2-211ENST00000541562 BBOF1Q8ND07 529 aa15.64■□□□□ 0.09
VARS2-211ENST00000541562 C3orf70A6NLC5 250 aaPredicted RBP15.64■□□□□ 0.09
VARS2-211ENST00000541562 ALOX15BO15296 676 aa15.64■□□□□ 0.09
VARS2-211ENST00000541562 GPD1P21695 349 aa15.64■□□□□ 0.09
VARS2-211ENST00000541562 EFNA5P52803 228 aa15.64■□□□□ 0.09
VARS2-211ENST00000541562 CAV1Q03135 178 aa15.64■□□□□ 0.09
VARS2-211ENST00000541562 MORF4L2Q15014 288 aa15.64■□□□□ 0.09
VARS2-211ENST00000541562 TAF11Q15544 211 aa15.64■□□□□ 0.09
VARS2-211ENST00000541562 ANKRD20A3Q5VUR7 823 aa15.64■□□□□ 0.09
VARS2-211ENST00000541562 ARMCX2Q7L311 632 aa15.64■□□□□ 0.09
VARS2-211ENST00000541562 USP33Q8TEY7 942 aa15.64■□□□□ 0.09
VARS2-211ENST00000541562 PGBD4Q96DM1 585 aa15.64■□□□□ 0.09
VARS2-211ENST00000541562 MYCBPQ99417 103 aaPredicted RBP15.64■□□□□ 0.09
VARS2-211ENST00000541562 SNRNP25Q9BV90 132 aaKnown RBP15.64■□□□□ 0.09
VARS2-211ENST00000541562 NIFKQ9BYG3 293 aaKnown RBP15.64■□□□□ 0.09
VARS2-211ENST00000541562 PCDH9Q9HC56 1237 aa15.64■□□□□ 0.09
VARS2-211ENST00000541562 NEBLO76041 1014 aa15.63■□□□□ 0.09
VARS2-211ENST00000541562 KRT7P08729 469 aa15.63■□□□□ 0.09
VARS2-211ENST00000541562 TPH1P17752 444 aa15.63■□□□□ 0.09
VARS2-211ENST00000541562 ALDH3A1P30838 453 aa15.63■□□□□ 0.09
VARS2-211ENST00000541562 MXD4Q14582 209 aaPredicted RBP15.63■□□□□ 0.09
VARS2-211ENST00000541562 PPM1JQ5JR12 505 aa15.63■□□□□ 0.09
VARS2-211ENST00000541562 TTC30AQ86WT1 665 aa15.63■□□□□ 0.09
VARS2-211ENST00000541562 SLC35B2Q8TB61 432 aa15.63■□□□□ 0.09
VARS2-211ENST00000541562 PRRC2BQ5JSZ5 2229 aaKnown RBP15.63■□□□□ 0.09
VARS2-211ENST00000541562 UNC80Q8N2C7 3258 aa15.63■□□□□ 0.09
VARS2-211ENST00000541562 COPEO14579 308 aa15.63■□□□□ 0.09
VARS2-211ENST00000541562 SDC4P31431 198 aa15.63■□□□□ 0.09
VARS2-211ENST00000541562 RFC5P40937 340 aa15.63■□□□□ 0.09
VARS2-211ENST00000541562 GPD2P43304 727 aa15.63■□□□□ 0.09
VARS2-211ENST00000541562 ZNF132P52740 706 aa15.63■□□□□ 0.09
VARS2-211ENST00000541562 CHI3L2Q15782 390 aa15.63■□□□□ 0.09
VARS2-211ENST00000541562 NDUFAF2Q8N183 169 aa15.63■□□□□ 0.09
VARS2-211ENST00000541562 CCDC185Q8N715 623 aa15.63■□□□□ 0.09
VARS2-211ENST00000541562 MCUR1Q96AQ8 359 aa15.63■□□□□ 0.09
VARS2-211ENST00000541562 TMEM120AQ9BXJ8 343 aa15.63■□□□□ 0.09
VARS2-211ENST00000541562 SMYD2Q9NRG4 433 aa15.63■□□□□ 0.09
VARS2-211ENST00000541562 FIS1Q9Y3D6 152 aa15.63■□□□□ 0.09
VARS2-211ENST00000541562 STYXL1Q9Y6J8 313 aa15.63■□□□□ 0.09
VARS2-211ENST00000541562 SOCS7O14512 581 aa15.62■□□□□ 0.09
VARS2-211ENST00000541562 LGALS2P05162 132 aa15.62■□□□□ 0.09
VARS2-211ENST00000541562 GOT1P17174 413 aa15.62■□□□□ 0.09
VARS2-211ENST00000541562 MLH1P40692 756 aa15.62■□□□□ 0.09
VARS2-211ENST00000541562 RPL10AP62906 217 aaKnown RBP15.62■□□□□ 0.09
VARS2-211ENST00000541562 DCAF6Q58WW2 860 aa15.62■□□□□ 0.09
VARS2-211ENST00000541562 TNFAIP8L3Q5GJ75 292 aa15.62■□□□□ 0.09
VARS2-211ENST00000541562 FYB2Q5VWT5 728 aa15.62■□□□□ 0.09
VARS2-211ENST00000541562 PDCD7Q8N8D1 485 aaKnown RBP15.62■□□□□ 0.09
VARS2-211ENST00000541562 CHST13Q8NET6 341 aa15.62■□□□□ 0.09
VARS2-211ENST00000541562 MAP3K20Q9NYL2 800 aaKnown RBP15.62■□□□□ 0.09
VARS2-211ENST00000541562 MEIS3P2A8K0S8 358 aa15.62■□□□□ 0.09
VARS2-211ENST00000541562 H3BRJ5 948 aa15.62■□□□□ 0.09
VARS2-211ENST00000541562 PHBP35232 272 aa15.62■□□□□ 0.09
VARS2-211ENST00000541562 MSX2P35548 267 aaPredicted RBP15.62■□□□□ 0.09
VARS2-211ENST00000541562 ARFIP2P53365 341 aa15.62■□□□□ 0.09
VARS2-211ENST00000541562 MCL1Q07820 350 aa15.62■□□□□ 0.09
VARS2-211ENST00000541562 VWA5B1Q5TIE3 1220 aa15.62■□□□□ 0.09
VARS2-211ENST00000541562 PCDH19Q8TAB3 1148 aa15.62■□□□□ 0.09
VARS2-211ENST00000541562 TMEM109Q9BVC6 243 aa15.62■□□□□ 0.09
VARS2-211ENST00000541562 PDZD7Q9H5P4 517 aa15.62■□□□□ 0.09
VARS2-211ENST00000541562 WDR27A2RRH5 827 aa15.62■□□□□ 0.09
VARS2-211ENST00000541562 PMM2O15305 246 aa15.62■□□□□ 0.09
VARS2-211ENST00000541562 EDF1O60869 148 aaKnown RBP15.62■□□□□ 0.09
VARS2-211ENST00000541562 CTSHP09668 335 aa15.62■□□□□ 0.09
VARS2-211ENST00000541562 EIF4BP23588 611 aaKnown RBP15.62■□□□□ 0.09
VARS2-211ENST00000541562 CLDN10P78369 228 aa15.62■□□□□ 0.09
VARS2-211ENST00000541562 BEX3Q00994 111 aa15.62■□□□□ 0.09
VARS2-211ENST00000541562 SLC10A2Q12908 348 aaPredicted RBP15.62■□□□□ 0.09
VARS2-211ENST00000541562 CCDC14Q49A88 953 aa15.62■□□□□ 0.09
VARS2-211ENST00000541562 PREPLQ4J6C6 727 aaPredicted RBP15.62■□□□□ 0.09
VARS2-211ENST00000541562 XRRA1Q6P2D8 792 aa15.62■□□□□ 0.09
VARS2-211ENST00000541562 SPATA6LQ8N4H0 392 aa15.62■□□□□ 0.09
VARS2-211ENST00000541562 NAT8LQ8N9F0 302 aa15.62■□□□□ 0.09
VARS2-211ENST00000541562 FAM13CQ8NE31 585 aa15.62■□□□□ 0.09
VARS2-211ENST00000541562 ASNSD1Q9NWL6 643 aa15.62■□□□□ 0.09
VARS2-211ENST00000541562 FZD9O00144 591 aa15.61■□□□□ 0.09
VARS2-211ENST00000541562 SORBS2O94875 1100 aaKnown RBP15.61■□□□□ 0.09
VARS2-211ENST00000541562 UNC5CO95185 931 aa15.61■□□□□ 0.09
VARS2-211ENST00000541562 ATG7O95352 703 aa15.61■□□□□ 0.09
VARS2-211ENST00000541562 CSH1P0DML2 217 aa15.61■□□□□ 0.09
VARS2-211ENST00000541562 CSH2P0DML3 217 aa15.61■□□□□ 0.09
VARS2-211ENST00000541562 AFF1P51825 1210 aaKnown RBP15.61■□□□□ 0.09
VARS2-211ENST00000541562 ZPBP2Q6X784 338 aa15.61■□□□□ 0.09
VARS2-211ENST00000541562 SYDE1Q6ZW31 735 aaPredicted RBP15.61■□□□□ 0.09
VARS2-211ENST00000541562 ZFP42Q96MM3 310 aa15.61■□□□□ 0.09
VARS2-211ENST00000541562 RHOBTB2Q9BYZ6 727 aa15.61■□□□□ 0.09
VARS2-211ENST00000541562 MAN1C1Q9NR34 630 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms