RNA–Protein interactions for RNA: ENST00000540060.1

LPCAT3-209, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 4

Gene LPCAT3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-209ENST00000540060 GMIPQ9P107 970 aa7.35□□□□□ -1.23
LPCAT3-209ENST00000540060 CYTH4Q9UIA0 394 aa7.35□□□□□ -1.23
LPCAT3-209ENST00000540060 ZMYM5Q9UJ78 669 aa7.35□□□□□ -1.23
LPCAT3-209ENST00000540060 MYO6Q9UM54 1294 aa7.35□□□□□ -1.23
LPCAT3-209ENST00000540060 SCML2Q9UQR0 700 aa7.35□□□□□ -1.23
LPCAT3-209ENST00000540060 NUMBLQ9Y6R0 609 aa7.35□□□□□ -1.23
LPCAT3-209ENST00000540060 A0A1W2PQJ5 194 aa7.34□□□□□ -1.23
LPCAT3-209ENST00000540060 LRRC53A6NM62 1247 aa7.34□□□□□ -1.23
LPCAT3-209ENST00000540060 CBFA2T2O43439 604 aa7.34□□□□□ -1.23
LPCAT3-209ENST00000540060 ECI2O75521 394 aa7.34□□□□□ -1.23
LPCAT3-209ENST00000540060 ZBED1O96006 694 aa7.34□□□□□ -1.23
LPCAT3-209ENST00000540060 GYPCP04921 128 aa7.34□□□□□ -1.23
LPCAT3-209ENST00000540060 TPM3P06753 285 aa7.34□□□□□ -1.23
LPCAT3-209ENST00000540060 MMEP08473 750 aa7.34□□□□□ -1.23
LPCAT3-209ENST00000540060 PFKLP17858 780 aa7.34□□□□□ -1.23
LPCAT3-209ENST00000540060 CDH5P33151 784 aaPredicted RBP7.34□□□□□ -1.23
LPCAT3-209ENST00000540060 PGFP49763 221 aa7.34□□□□□ -1.23
LPCAT3-209ENST00000540060 RGS7P49802 495 aa7.34□□□□□ -1.23
LPCAT3-209ENST00000540060 TUBP50607 506 aa7.34□□□□□ -1.23
LPCAT3-209ENST00000540060 TKTL1P51854 596 aa7.34□□□□□ -1.23
LPCAT3-209ENST00000540060 PDCLQ13371 301 aa7.34□□□□□ -1.23
LPCAT3-209ENST00000540060 PDAP1Q13442 181 aaKnown RBP7.34□□□□□ -1.23
LPCAT3-209ENST00000540060 TAF3Q5VWG9 929 aa7.34□□□□□ -1.23
LPCAT3-209ENST00000540060 E4F1Q66K89 784 aaPredicted RBP7.34□□□□□ -1.23
LPCAT3-209ENST00000540060 PM20D1Q6GTS8 502 aa7.34□□□□□ -1.23
LPCAT3-209ENST00000540060 TREML4Q6UXN2 200 aa7.34□□□□□ -1.23
LPCAT3-209ENST00000540060 ZNF677Q86XU0 584 aa7.34□□□□□ -1.23
LPCAT3-209ENST00000540060 PASD1Q8IV76 773 aa7.34□□□□□ -1.23
LPCAT3-209ENST00000540060 CMTM8Q8IZV2 173 aa7.34□□□□□ -1.23
LPCAT3-209ENST00000540060 SIX6OS1Q8N1H7 587 aa7.34□□□□□ -1.23
LPCAT3-209ENST00000540060 SCML4Q8N228 414 aa7.34□□□□□ -1.23
LPCAT3-209ENST00000540060 WDTC1Q8N5D0 677 aa7.34□□□□□ -1.23
LPCAT3-209ENST00000540060 C1orf131Q8NDD1 294 aaKnown RBP7.34□□□□□ -1.23
LPCAT3-209ENST00000540060 ST13P5Q8NFI4 369 aaPredicted RBP7.34□□□□□ -1.23
LPCAT3-209ENST00000540060 OLIG1Q8TAK6 271 aa7.34□□□□□ -1.23
LPCAT3-209ENST00000540060 STK32AQ8WU08 396 aa7.34□□□□□ -1.23
LPCAT3-209ENST00000540060 RSAD2Q8WXG1 361 aa7.34□□□□□ -1.23
LPCAT3-209ENST00000540060 ELSPBP1Q96BH3 223 aa7.34□□□□□ -1.23
LPCAT3-209ENST00000540060 RSPRY1Q96DX4 576 aa7.34□□□□□ -1.23
LPCAT3-209ENST00000540060 IQCDQ96DY2 449 aa7.34□□□□□ -1.23
LPCAT3-209ENST00000540060 HSFY1Q96LI6 401 aa7.34□□□□□ -1.23
LPCAT3-209ENST00000540060 SLC22A12Q96S37 553 aa7.34□□□□□ -1.23
LPCAT3-209ENST00000540060 KXD1Q9BQD3 176 aa7.34□□□□□ -1.23
LPCAT3-209ENST00000540060 COL25A1Q9BXS0 654 aaPredicted RBP7.34□□□□□ -1.23
LPCAT3-209ENST00000540060 SLC4A5Q9BY07 1137 aa7.34□□□□□ -1.23
LPCAT3-209ENST00000540060 ULBP1Q9BZM6 244 aa7.34□□□□□ -1.23
LPCAT3-209ENST00000540060 EDEM3Q9BZQ6 932 aa7.34□□□□□ -1.23
LPCAT3-209ENST00000540060 LHX5Q9H2C1 402 aa7.34□□□□□ -1.23
LPCAT3-209ENST00000540060 KCNK12Q9HB15 430 aa7.34□□□□□ -1.23
LPCAT3-209ENST00000540060 NMUR1Q9HB89 426 aa7.34□□□□□ -1.23
LPCAT3-209ENST00000540060 TRPC7Q9HCX4 862 aa7.34□□□□□ -1.23
LPCAT3-209ENST00000540060 CYLDQ9NQC7 956 aa7.34□□□□□ -1.23
LPCAT3-209ENST00000540060 TLR8Q9NR97 1041 aaKnown RBP7.34□□□□□ -1.23
LPCAT3-209ENST00000540060 OSER1Q9NX31 292 aa7.34□□□□□ -1.23
LPCAT3-209ENST00000540060 IGSF9Q9P2J2 1179 aa7.34□□□□□ -1.23
LPCAT3-209ENST00000540060 LIMD1Q9UGP4 676 aa7.34□□□□□ -1.23
LPCAT3-209ENST00000540060 KMT2EQ8IZD2 1858 aa7.34□□□□□ -1.23
LPCAT3-209ENST00000540060 TRAV19A0A0A6YYK7 116 aa7.33□□□□□ -1.24
LPCAT3-209ENST00000540060 A0A1W2PQH9 124 aa7.33□□□□□ -1.24
LPCAT3-209ENST00000540060 E5RJQ4 531 aa7.33□□□□□ -1.24
LPCAT3-209ENST00000540060 PIK3R2O00459 728 aa7.33□□□□□ -1.24
LPCAT3-209ENST00000540060 COCHO43405 550 aa7.33□□□□□ -1.24
LPCAT3-209ENST00000540060 TLR5O60602 858 aa7.33□□□□□ -1.24
LPCAT3-209ENST00000540060 LSM8O95777 96 aaKnown RBP7.33□□□□□ -1.24
LPCAT3-209ENST00000540060 CKMP06732 381 aa7.33□□□□□ -1.24
LPCAT3-209ENST00000540060 USP17L7P0C7H9 530 aa7.33□□□□□ -1.24
LPCAT3-209ENST00000540060 LCP1P13796 627 aa7.33□□□□□ -1.24
LPCAT3-209ENST00000540060 FERP16591 822 aa7.33□□□□□ -1.24
LPCAT3-209ENST00000540060 CHRNB2P17787 502 aa7.33□□□□□ -1.24
LPCAT3-209ENST00000540060 KRT9P35527 623 aa7.33□□□□□ -1.24
LPCAT3-209ENST00000540060 AVPR1AP37288 418 aa7.33□□□□□ -1.24
LPCAT3-209ENST00000540060 VIPR2P41587 438 aa7.33□□□□□ -1.24
LPCAT3-209ENST00000540060 PRKCIP41743 596 aa7.33□□□□□ -1.24
LPCAT3-209ENST00000540060 PSEN1P49768 467 aa7.33□□□□□ -1.24
LPCAT3-209ENST00000540060 DAOAP59103 153 aa7.33□□□□□ -1.24
LPCAT3-209ENST00000540060 NOMO3P69849 1222 aa7.33□□□□□ -1.24
LPCAT3-209ENST00000540060 FMO1Q01740 532 aa7.33□□□□□ -1.24
LPCAT3-209ENST00000540060 CDR2Q01850 454 aa7.33□□□□□ -1.24
LPCAT3-209ENST00000540060 ARID5AQ03989 594 aa7.33□□□□□ -1.24
LPCAT3-209ENST00000540060 USP4Q13107 963 aa7.33□□□□□ -1.24
LPCAT3-209ENST00000540060 ZNF268Q14587 947 aaPredicted RBP7.33□□□□□ -1.24
LPCAT3-209ENST00000540060 PTPN20Q4JDL3 420 aa7.33□□□□□ -1.24
LPCAT3-209ENST00000540060 SPECC1LQ69YQ0 1117 aa7.33□□□□□ -1.24
LPCAT3-209ENST00000540060 TANGO2Q6ICL3 276 aa7.33□□□□□ -1.24
LPCAT3-209ENST00000540060 VITQ6UXI7 678 aa7.33□□□□□ -1.24
LPCAT3-209ENST00000540060 IRF2BP2Q7Z5L9 587 aa7.33□□□□□ -1.24
LPCAT3-209ENST00000540060 SCD5Q86SK9 330 aa7.33□□□□□ -1.24
LPCAT3-209ENST00000540060 TMEM110Q86TL2 294 aa7.33□□□□□ -1.24
LPCAT3-209ENST00000540060 FMNL3Q8IVF7 1028 aa7.33□□□□□ -1.24
LPCAT3-209ENST00000540060 ARID3BQ8IVW6 561 aaPredicted RBP7.33□□□□□ -1.24
LPCAT3-209ENST00000540060 VSTM4Q8IW00 320 aa7.33□□□□□ -1.24
LPCAT3-209ENST00000540060 ARL14EPQ8N8R7 260 aaPredicted RBP7.33□□□□□ -1.24
LPCAT3-209ENST00000540060 RIN3Q8TB24 985 aa7.33□□□□□ -1.24
LPCAT3-209ENST00000540060 CLEC4CQ8WTT0 213 aa7.33□□□□□ -1.24
LPCAT3-209ENST00000540060 IRGQQ8WZA9 623 aa7.33□□□□□ -1.24
LPCAT3-209ENST00000540060 USP13Q92995 863 aaPredicted RBP7.33□□□□□ -1.24
LPCAT3-209ENST00000540060 NXPE3Q969Y0 559 aa7.33□□□□□ -1.24
LPCAT3-209ENST00000540060 ZFRQ96KR1 1074 aaKnown RBP7.33□□□□□ -1.24
LPCAT3-209ENST00000540060 CPXM1Q96SM3 734 aa7.33□□□□□ -1.24
LPCAT3-209ENST00000540060 CYP2S1Q96SQ9 504 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms