RNA–Protein interactions for RNA: ENST00000540057.1

C2CD3-214, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 4

Gene C2CD3, Length 556 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-214ENST00000540057 DSG1Q02413 1049 aa4.39□□□□□ -1.71
C2CD3-214ENST00000540057 CYP4F3Q08477 520 aa4.39□□□□□ -1.71
C2CD3-214ENST00000540057 SCAPQ12770 1279 aa4.39□□□□□ -1.71
C2CD3-214ENST00000540057 TRAF1Q13077 416 aa4.39□□□□□ -1.71
C2CD3-214ENST00000540057 CCDC178Q5BJE1 867 aa4.39□□□□□ -1.71
C2CD3-214ENST00000540057 ZNF484Q5JVG2 852 aa4.39□□□□□ -1.71
C2CD3-214ENST00000540057 ZFYVE27Q5T4F4 411 aa4.39□□□□□ -1.71
C2CD3-214ENST00000540057 WWC2Q6AWC2 1192 aa4.39□□□□□ -1.71
C2CD3-214ENST00000540057 TANGO2Q6ICL3 276 aa4.39□□□□□ -1.71
C2CD3-214ENST00000540057 GLB1LQ6UWU2 654 aa4.39□□□□□ -1.71
C2CD3-214ENST00000540057 Q6ZS52 159 aa4.39□□□□□ -1.71
C2CD3-214ENST00000540057 CACNA2D4Q7Z3S7 1137 aa4.39□□□□□ -1.71
C2CD3-214ENST00000540057 IQCA1Q86XH1 822 aa4.39□□□□□ -1.71
C2CD3-214ENST00000540057 NT5DC4Q86YG4 428 aa4.39□□□□□ -1.71
C2CD3-214ENST00000540057 METTL13Q8N6R0 699 aa4.39□□□□□ -1.71
C2CD3-214ENST00000540057 LINC01465Q8N7H1 131 aa4.39□□□□□ -1.71
C2CD3-214ENST00000540057 DEFB124Q8NES8 71 aa4.39□□□□□ -1.71
C2CD3-214ENST00000540057 SMARCC2Q8TAQ2 1214 aa4.39□□□□□ -1.71
C2CD3-214ENST00000540057 GAB3Q8WWW8 586 aa4.39□□□□□ -1.71
C2CD3-214ENST00000540057 CPA5Q8WXQ8 436 aa4.39□□□□□ -1.71
C2CD3-214ENST00000540057 GPATCH3Q96I76 525 aa4.39□□□□□ -1.71
C2CD3-214ENST00000540057 MBOAT7Q96N66 472 aa4.39□□□□□ -1.71
C2CD3-214ENST00000540057 TMEM175Q9BSA9 504 aa4.39□□□□□ -1.71
C2CD3-214ENST00000540057 JADE2Q9NQC1 790 aa4.39□□□□□ -1.71
C2CD3-214ENST00000540057 RBM12Q9NTZ6 932 aaKnown RBP4.39□□□□□ -1.71
C2CD3-214ENST00000540057 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.39□□□□□ -1.71
C2CD3-214ENST00000540057 MYH9P35579 1960 aaKnown RBP4.39□□□□□ -1.71
C2CD3-214ENST00000540057 NUP205Q92621 2012 aa4.39□□□□□ -1.71
C2CD3-214ENST00000540057 ZMYM6O95789 1325 aa4.39□□□□□ -1.71
C2CD3-214ENST00000540057 PLXNB3Q9ULL4 1909 aa4.38□□□□□ -1.71
C2CD3-214ENST00000540057 ASCC3Q8N3C0 2202 aaKnown RBP4.38□□□□□ -1.71
C2CD3-214ENST00000540057 ASXL3Q9C0F0 2248 aa4.38□□□□□ -1.71
C2CD3-214ENST00000540057 LNP1A1A4G5 178 aa4.38□□□□□ -1.71
C2CD3-214ENST00000540057 C7orf72A4D263 438 aa4.38□□□□□ -1.71
C2CD3-214ENST00000540057 B4E1Z4 1266 aa4.38□□□□□ -1.71
C2CD3-214ENST00000540057 F8W810 466 aa4.38□□□□□ -1.71
C2CD3-214ENST00000540057 CCL16O15467 120 aa4.38□□□□□ -1.71
C2CD3-214ENST00000540057 ZNF623O75123 536 aa4.38□□□□□ -1.71
C2CD3-214ENST00000540057 RPP40O75818 363 aaKnown RBP4.38□□□□□ -1.71
C2CD3-214ENST00000540057 CCNE2O96020 404 aa4.38□□□□□ -1.71
C2CD3-214ENST00000540057 POMCP01189 267 aa4.38□□□□□ -1.71
C2CD3-214ENST00000540057 HNRNPA1P09651 372 aaKnown RBP eCLIP4.38□□□□□ -1.71
C2CD3-214ENST00000540057 RPL17P18621 184 aaKnown RBP4.38□□□□□ -1.71
C2CD3-214ENST00000540057 FCARP24071 287 aa4.38□□□□□ -1.71
C2CD3-214ENST00000540057 CCNE1P24864 410 aa4.38□□□□□ -1.71
C2CD3-214ENST00000540057 PXNP49023 591 aaPredicted RBP4.38□□□□□ -1.71
C2CD3-214ENST00000540057 GPC3P51654 580 aa4.38□□□□□ -1.71
C2CD3-214ENST00000540057 ITGB3BPQ13352 177 aaPredicted RBP4.38□□□□□ -1.71
C2CD3-214ENST00000540057 PLK5Q496M5 336 aa4.38□□□□□ -1.71
C2CD3-214ENST00000540057 NT5DC1Q5TFE4 455 aa4.38□□□□□ -1.71
C2CD3-214ENST00000540057 EFCAB12Q6NXP0 572 aa4.38□□□□□ -1.71
C2CD3-214ENST00000540057 ABHD15Q6UXT9 468 aa4.38□□□□□ -1.71
C2CD3-214ENST00000540057 ADAT2Q7Z6V5 191 aaKnown RBP4.38□□□□□ -1.71
C2CD3-214ENST00000540057 CCDC60Q8IWA6 550 aaPredicted RBP4.38□□□□□ -1.71
C2CD3-214ENST00000540057 COLGALT2Q8IYK4 626 aa4.38□□□□□ -1.71
C2CD3-214ENST00000540057 CHCHD4Q8N4Q1 142 aa4.38□□□□□ -1.71
C2CD3-214ENST00000540057 ING5Q8WYH8 240 aa4.38□□□□□ -1.71
C2CD3-214ENST00000540057 CUL5Q93034 780 aa4.38□□□□□ -1.71
C2CD3-214ENST00000540057 ELSPBP1Q96BH3 223 aa4.38□□□□□ -1.71
C2CD3-214ENST00000540057 MCRS1Q96EZ8 462 aa4.38□□□□□ -1.71
C2CD3-214ENST00000540057 PEX11GQ96HA9 241 aa4.38□□□□□ -1.71
C2CD3-214ENST00000540057 ZC3H10Q96K80 434 aaKnown RBP4.38□□□□□ -1.71
C2CD3-214ENST00000540057 B3GALT6Q96L58 329 aa4.38□□□□□ -1.71
C2CD3-214ENST00000540057 SDF4Q9BRK5 362 aa4.38□□□□□ -1.71
C2CD3-214ENST00000540057 BDH2Q9BUT1 245 aa4.38□□□□□ -1.71
C2CD3-214ENST00000540057 RNF41Q9H4P4 317 aaPredicted RBP4.38□□□□□ -1.71
C2CD3-214ENST00000540057 BRD9Q9H8M2 597 aa4.38□□□□□ -1.71
C2CD3-214ENST00000540057 ZNF334Q9HCZ1 680 aaPredicted RBP4.38□□□□□ -1.71
C2CD3-214ENST00000540057 TRPV5Q9NQA5 729 aa4.38□□□□□ -1.71
C2CD3-214ENST00000540057 CHST12Q9NRB3 414 aa4.38□□□□□ -1.71
C2CD3-214ENST00000540057 ZBTB40Q9NUA8 1239 aa4.38□□□□□ -1.71
C2CD3-214ENST00000540057 HCFC1R1Q9NWW0 138 aa4.38□□□□□ -1.71
C2CD3-214ENST00000540057 FNIP2Q9P278 1114 aa4.38□□□□□ -1.71
C2CD3-214ENST00000540057 DNMT3BQ9UBC3 853 aaKnown RBP4.38□□□□□ -1.71
C2CD3-214ENST00000540057 FBXW11Q9UKB1 542 aa4.38□□□□□ -1.71
C2CD3-214ENST00000540057 AKT3Q9Y243 479 aa4.38□□□□□ -1.71
C2CD3-214ENST00000540057 PRG3Q9Y2Y8 225 aaPredicted RBP4.38□□□□□ -1.71
C2CD3-214ENST00000540057 EMC9Q9Y3B6 208 aa4.38□□□□□ -1.71
C2CD3-214ENST00000540057 RAI2Q9Y5P3 530 aa4.38□□□□□ -1.71
C2CD3-214ENST00000540057 PIAS3Q9Y6X2 628 aa4.38□□□□□ -1.71
C2CD3-214ENST00000540057 NFASCO94856 1347 aa4.38□□□□□ -1.71
C2CD3-214ENST00000540057 TDRD15B5MCY1 1934 aaKnown RBP4.37□□□□□ -1.71
C2CD3-214ENST00000540057 UNC79Q9P2D8 2635 aa4.37□□□□□ -1.71
C2CD3-214ENST00000540057 CCDC163A0A0D9SF12 145 aa4.37□□□□□ -1.71
C2CD3-214ENST00000540057 NPHP3-ACAD11A0A0J9YXS1 232 aa4.37□□□□□ -1.71
C2CD3-214ENST00000540057 SPAARA0A1B0GVQ0 90 aa4.37□□□□□ -1.71
C2CD3-214ENST00000540057 BCLAF3A2AJT9 711 aaKnown RBP4.37□□□□□ -1.71
C2CD3-214ENST00000540057 ANKRD34BA5PLL1 514 aa4.37□□□□□ -1.71
C2CD3-214ENST00000540057 MAGEB2O15479 319 aa4.37□□□□□ -1.71
C2CD3-214ENST00000540057 NOBOXO60393 691 aa4.37□□□□□ -1.71
C2CD3-214ENST00000540057 CAVIN2O95810 425 aa4.37□□□□□ -1.71
C2CD3-214ENST00000540057 C8BP07358 591 aa4.37□□□□□ -1.71
C2CD3-214ENST00000540057 CCDC192P0DO97 292 aa4.37□□□□□ -1.71
C2CD3-214ENST00000540057 PAMP19021 973 aa4.37□□□□□ -1.71
C2CD3-214ENST00000540057 HOXA9P31269 272 aa4.37□□□□□ -1.71
C2CD3-214ENST00000540057 OR1G1P47890 313 aa4.37□□□□□ -1.71
C2CD3-214ENST00000540057 NT5C2P49902 561 aa4.37□□□□□ -1.71
C2CD3-214ENST00000540057 LRRC32Q14392 662 aa4.37□□□□□ -1.71
C2CD3-214ENST00000540057 GRM4Q14833 912 aa4.37□□□□□ -1.71
C2CD3-214ENST00000540057 SEC23AQ15436 765 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms