RNA–Protein interactions for RNA: ENST00000539522.2

CCDC42-202, Transcript of coiled-coil domain containing 42, humanhuman

TSL 1 (best) BASIC

Gene CCDC42, Length 1,087 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-202ENST00000539522 SCUBE3Q8IX30 993 aa13.67□□□□□ -0.22
CCDC42-202ENST00000539522 SCML4Q8N228 414 aa13.67□□□□□ -0.22
CCDC42-202ENST00000539522 ELMOD1Q8N336 334 aa13.67□□□□□ -0.22
CCDC42-202ENST00000539522 CPA5Q8WXQ8 436 aa13.67□□□□□ -0.22
CCDC42-202ENST00000539522 MCRS1Q96EZ8 462 aa13.67□□□□□ -0.22
CCDC42-202ENST00000539522 HSFY1Q96LI6 401 aa13.67□□□□□ -0.22
CCDC42-202ENST00000539522 NECAB3Q96P71 396 aaPredicted RBP13.67□□□□□ -0.22
CCDC42-202ENST00000539522 CYP2S1Q96SQ9 504 aa13.67□□□□□ -0.22
CCDC42-202ENST00000539522 BAG1Q99933 345 aaPredicted RBP13.67□□□□□ -0.22
CCDC42-202ENST00000539522 RPP25Q9BUL9 199 aaKnown RBP13.67□□□□□ -0.22
CCDC42-202ENST00000539522 PHF7Q9BWX1 381 aaPredicted RBP13.67□□□□□ -0.22
CCDC42-202ENST00000539522 ADAM33Q9BZ11 813 aa13.67□□□□□ -0.22
CCDC42-202ENST00000539522 SMG9Q9H0W8 520 aaKnown RBP13.67□□□□□ -0.22
CCDC42-202ENST00000539522 ATXN3LQ9H3M9 355 aa13.67□□□□□ -0.22
CCDC42-202ENST00000539522 CCSER2Q9H7U1 834 aa13.67□□□□□ -0.22
CCDC42-202ENST00000539522 ZNHIT6Q9NWK9 470 aaKnown RBP13.67□□□□□ -0.22
CCDC42-202ENST00000539522 COMMD8Q9NX08 183 aa13.67□□□□□ -0.22
CCDC42-202ENST00000539522 MRPS23Q9Y3D9 190 aaKnown RBP13.67□□□□□ -0.22
CCDC42-202ENST00000539522 TCRBV5S1A1TA0A578 114 aa13.66□□□□□ -0.22
CCDC42-202ENST00000539522 TBX18O95935 607 aa13.66□□□□□ -0.22
CCDC42-202ENST00000539522 ZBED1O96006 694 aa13.66□□□□□ -0.22
CCDC42-202ENST00000539522 LAMP2P13473 410 aa13.66□□□□□ -0.22
CCDC42-202ENST00000539522 FECHP22830 423 aa13.66□□□□□ -0.22
CCDC42-202ENST00000539522 GABRB2P47870 512 aa13.66□□□□□ -0.22
CCDC42-202ENST00000539522 CCZ1BP86790 482 aa13.66□□□□□ -0.22
CCDC42-202ENST00000539522 CCZ1P86791 482 aaPredicted RBP13.66□□□□□ -0.22
CCDC42-202ENST00000539522 CENPCQ03188 943 aa13.66□□□□□ -0.22
CCDC42-202ENST00000539522 FAM78AQ5JUQ0 283 aa13.66□□□□□ -0.22
CCDC42-202ENST00000539522 CYP4A22Q5TCH4 519 aa13.66□□□□□ -0.22
CCDC42-202ENST00000539522 TRNP1Q6NT89 227 aa13.66□□□□□ -0.22
CCDC42-202ENST00000539522 OLFML1Q6UWY5 402 aa13.66□□□□□ -0.22
CCDC42-202ENST00000539522 FAM183BPQ6ZVS7 135 aa13.66□□□□□ -0.22
CCDC42-202ENST00000539522 TMTC1Q8IUR5 882 aa13.66□□□□□ -0.22
CCDC42-202ENST00000539522 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.66□□□□□ -0.22
CCDC42-202ENST00000539522 LEMD2Q8NC56 503 aa13.66□□□□□ -0.22
CCDC42-202ENST00000539522 ADAMTS19Q8TE59 1207 aa13.66□□□□□ -0.22
CCDC42-202ENST00000539522 FBXO32Q969P5 355 aa13.66□□□□□ -0.22
CCDC42-202ENST00000539522 WBP2Q969T9 261 aa13.66□□□□□ -0.22
CCDC42-202ENST00000539522 PPP1R13BQ96KQ4 1090 aa13.66□□□□□ -0.22
CCDC42-202ENST00000539522 ZFRQ96KR1 1074 aaKnown RBP13.66□□□□□ -0.22
CCDC42-202ENST00000539522 PLA2G2FQ9BZM2 168 aa13.66□□□□□ -0.22
CCDC42-202ENST00000539522 DNAI2Q9GZS0 605 aa13.66□□□□□ -0.22
CCDC42-202ENST00000539522 EPS15L1Q9UBC2 864 aa13.66□□□□□ -0.22
CCDC42-202ENST00000539522 CDH7Q9ULB5 785 aa13.66□□□□□ -0.22
CCDC42-202ENST00000539522 CCL26Q9Y258 94 aa13.66□□□□□ -0.22
CCDC42-202ENST00000539522 A0A087X0T9 212 aa13.65□□□□□ -0.22
CCDC42-202ENST00000539522 ANHXE9PGG2 379 aa13.65□□□□□ -0.22
CCDC42-202ENST00000539522 SLC34A2O95436 690 aa13.65□□□□□ -0.22
CCDC42-202ENST00000539522 LSM8O95777 96 aaKnown RBP13.65□□□□□ -0.22
CCDC42-202ENST00000539522 SERPING1P05155 500 aa13.65□□□□□ -0.22
CCDC42-202ENST00000539522 FAM228BP0C875 321 aa13.65□□□□□ -0.22
CCDC42-202ENST00000539522 MMP8P22894 467 aa13.65□□□□□ -0.22
CCDC42-202ENST00000539522 MSNP26038 577 aaKnown RBP13.65□□□□□ -0.22
CCDC42-202ENST00000539522 CDC25CP30307 473 aa13.65□□□□□ -0.22
CCDC42-202ENST00000539522 CDK17Q00537 523 aa13.65□□□□□ -0.22
CCDC42-202ENST00000539522 KLHL30Q0D2K2 578 aa13.65□□□□□ -0.22
CCDC42-202ENST00000539522 PUS10Q3MIT2 529 aaKnown RBP13.65□□□□□ -0.22
CCDC42-202ENST00000539522 GPR158Q5T848 1215 aa13.65□□□□□ -0.22
CCDC42-202ENST00000539522 PARM1Q6UWI2 310 aa13.65□□□□□ -0.22
CCDC42-202ENST00000539522 MON1BQ7L1V2 547 aa13.65□□□□□ -0.22
CCDC42-202ENST00000539522 MON1AQ86VX9 555 aa13.65□□□□□ -0.22
CCDC42-202ENST00000539522 XYLT1Q86Y38 959 aa13.65□□□□□ -0.22
CCDC42-202ENST00000539522 TMEM139Q8IV31 216 aa13.65□□□□□ -0.22
CCDC42-202ENST00000539522 FMNL3Q8IVF7 1028 aa13.65□□□□□ -0.22
CCDC42-202ENST00000539522 RSAD2Q8WXG1 361 aa13.65□□□□□ -0.22
CCDC42-202ENST00000539522 OVCA2Q8WZ82 227 aa13.65□□□□□ -0.22
CCDC42-202ENST00000539522 FGF14Q92915 247 aa13.65□□□□□ -0.22
CCDC42-202ENST00000539522 RPGRIP1Q96KN7 1286 aa13.65□□□□□ -0.22
CCDC42-202ENST00000539522 ASB16Q96NS5 453 aa13.65□□□□□ -0.22
CCDC42-202ENST00000539522 MIS12Q9H081 205 aa13.65□□□□□ -0.22
CCDC42-202ENST00000539522 FBXO44Q9H4M3 255 aa13.65□□□□□ -0.22
CCDC42-202ENST00000539522 CYLDQ9NQC7 956 aa13.65□□□□□ -0.22
CCDC42-202ENST00000539522 CNGB3Q9NQW8 809 aa13.65□□□□□ -0.22
CCDC42-202ENST00000539522 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.65□□□□□ -0.22
CCDC42-202ENST00000539522 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.65□□□□□ -0.22
CCDC42-202ENST00000539522 NUDT5Q9UKK9 219 aa13.65□□□□□ -0.22
CCDC42-202ENST00000539522 USTQ9Y2C2 406 aa13.65□□□□□ -0.22
CCDC42-202ENST00000539522 ESPNB1AK53 854 aa13.64□□□□□ -0.23
CCDC42-202ENST00000539522 ZNF197O14709 1029 aa13.64□□□□□ -0.23
CCDC42-202ENST00000539522 ZNF263O14978 683 aa13.64□□□□□ -0.23
CCDC42-202ENST00000539522 MDM4O15151 490 aa13.64□□□□□ -0.23
CCDC42-202ENST00000539522 ARHGAP6O43182 974 aa13.64□□□□□ -0.23
CCDC42-202ENST00000539522 COCHO43405 550 aa13.64□□□□□ -0.23
CCDC42-202ENST00000539522 GREM1O60565 184 aa13.64□□□□□ -0.23
CCDC42-202ENST00000539522 GJB6O95452 261 aa13.64□□□□□ -0.23
CCDC42-202ENST00000539522 PITX1P78337 314 aaPredicted RBP13.64□□□□□ -0.23
CCDC42-202ENST00000539522 HTR4Q13639 388 aa13.64□□□□□ -0.23
CCDC42-202ENST00000539522 OTUD1Q5VV17 481 aaPredicted RBP13.64□□□□□ -0.23
CCDC42-202ENST00000539522 MMS22LQ6ZRQ5 1243 aa13.64□□□□□ -0.23
CCDC42-202ENST00000539522 PHLDB2Q86SQ0 1253 aa13.64□□□□□ -0.23
CCDC42-202ENST00000539522 PHF13Q86YI8 300 aaPredicted RBP13.64□□□□□ -0.23
CCDC42-202ENST00000539522 ADHFE1Q8IWW8 467 aa13.64□□□□□ -0.23
CCDC42-202ENST00000539522 ARL14EPQ8N8R7 260 aaPredicted RBP13.64□□□□□ -0.23
CCDC42-202ENST00000539522 MAB21L3Q8N8X9 362 aa13.64□□□□□ -0.23
CCDC42-202ENST00000539522 TMEM35BQ8NCS4 154 aa13.64□□□□□ -0.23
CCDC42-202ENST00000539522 KIAA1524Q8TCG1 905 aa13.64□□□□□ -0.23
CCDC42-202ENST00000539522 USP13Q92995 863 aaPredicted RBP13.64□□□□□ -0.23
CCDC42-202ENST00000539522 SMOC2Q9H3U7 446 aa13.64□□□□□ -0.23
CCDC42-202ENST00000539522 TASP1Q9H6P5 420 aa13.64□□□□□ -0.23
CCDC42-202ENST00000539522 LRRC4Q9HBW1 653 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms