RNA–Protein interactions for RNA: ENST00000537047.5

CCDC7-208, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-208ENST00000537047 SQORQ9Y6N5 450 aa6.25□□□□□ -1.41
CCDC7-208ENST00000537047 TTC3P53804 2025 aa6.25□□□□□ -1.41
CCDC7-208ENST00000537047 FAM90A10PA6NDY2 464 aa6.24□□□□□ -1.41
CCDC7-208ENST00000537047 RGS10O43665 173 aa6.24□□□□□ -1.41
CCDC7-208ENST00000537047 EN2P19622 333 aaPredicted RBP6.24□□□□□ -1.41
CCDC7-208ENST00000537047 SLC7A1P30825 629 aa6.24□□□□□ -1.41
CCDC7-208ENST00000537047 AGFG1P52594 562 aaKnown RBP6.24□□□□□ -1.41
CCDC7-208ENST00000537047 ID2Q02363 134 aa6.24□□□□□ -1.41
CCDC7-208ENST00000537047 MCL1Q07820 350 aa6.24□□□□□ -1.41
CCDC7-208ENST00000537047 OVCH2Q7RTZ1 564 aa6.24□□□□□ -1.41
CCDC7-208ENST00000537047 METTL25Q8N6Q8 603 aa6.24□□□□□ -1.41
CCDC7-208ENST00000537047 ACRBPQ8NEB7 543 aa6.24□□□□□ -1.41
CCDC7-208ENST00000537047 MARK4Q96L34 752 aa6.24□□□□□ -1.41
CCDC7-208ENST00000537047 HS6ST2Q96MM7 605 aa6.24□□□□□ -1.41
CCDC7-208ENST00000537047 NMRK2Q9NPI5 230 aa6.24□□□□□ -1.41
CCDC7-208ENST00000537047 XPNPEP3Q9NQH7 507 aa6.24□□□□□ -1.41
CCDC7-208ENST00000537047 EXOC5O00471 708 aa6.23□□□□□ -1.41
CCDC7-208ENST00000537047 CD3EAPO15446 510 aaKnown RBP6.23□□□□□ -1.41
CCDC7-208ENST00000537047 PHGDHO43175 533 aaKnown RBP6.23□□□□□ -1.41
CCDC7-208ENST00000537047 ALDH1L1O75891 902 aa6.23□□□□□ -1.41
CCDC7-208ENST00000537047 CTSAP10619 480 aa6.23□□□□□ -1.41
CCDC7-208ENST00000537047 PHKG2P15735 406 aa6.23□□□□□ -1.41
CCDC7-208ENST00000537047 HSPA6P17066 643 aa6.23□□□□□ -1.41
CCDC7-208ENST00000537047 EPHA3P29320 983 aa6.23□□□□□ -1.41
CCDC7-208ENST00000537047 THBS3P49746 956 aa6.23□□□□□ -1.41
CCDC7-208ENST00000537047 TWIST1Q15672 202 aa6.23□□□□□ -1.41
CCDC7-208ENST00000537047 PTPROQ16827 1216 aa6.23□□□□□ -1.41
CCDC7-208ENST00000537047 KIAA1161Q6NSJ0 714 aa6.23□□□□□ -1.41
CCDC7-208ENST00000537047 RAB11FIP4Q86YS3 637 aa6.23□□□□□ -1.41
CCDC7-208ENST00000537047 SPSB4Q96A44 273 aa6.23□□□□□ -1.41
CCDC7-208ENST00000537047 KAZALD1Q96I82 304 aa6.23□□□□□ -1.41
CCDC7-208ENST00000537047 ZNF518BQ9C0D4 1074 aa6.23□□□□□ -1.41
CCDC7-208ENST00000537047 SNX15Q9NRS6 342 aa6.23□□□□□ -1.41
CCDC7-208ENST00000537047 POT1Q9NUX5 634 aa6.23□□□□□ -1.41
CCDC7-208ENST00000537047 ZNF180Q9UJW8 692 aa6.23□□□□□ -1.41
CCDC7-208ENST00000537047 CLIC1O00299 241 aa6.22□□□□□ -1.41
CCDC7-208ENST00000537047 RRP9O43818 475 aaKnown RBP6.22□□□□□ -1.41
CCDC7-208ENST00000537047 TOMM40O96008 361 aa6.22□□□□□ -1.41
CCDC7-208ENST00000537047 CRYABP02511 175 aaKnown RBP6.22□□□□□ -1.41
CCDC7-208ENST00000537047 PTDSS1P48651 473 aaKnown RBP6.22□□□□□ -1.41
CCDC7-208ENST00000537047 TIAL1Q01085 375 aaKnown RBP eCLIP6.22□□□□□ -1.41
CCDC7-208ENST00000537047 SRSF1Q07955 248 aaKnown RBP eCLIP6.22□□□□□ -1.41
CCDC7-208ENST00000537047 PIN1Q13526 163 aaPredicted RBP6.22□□□□□ -1.41
CCDC7-208ENST00000537047 MFSD13AQ14CX5 517 aa6.22□□□□□ -1.41
CCDC7-208ENST00000537047 TTF1Q15361 905 aaPredicted RBP6.22□□□□□ -1.41
CCDC7-208ENST00000537047 ANO6Q4KMQ2 910 aa6.22□□□□□ -1.41
CCDC7-208ENST00000537047 EPM2AIP1Q7L775 607 aaPredicted RBP6.22□□□□□ -1.41
CCDC7-208ENST00000537047 ANKRD13BQ86YJ7 626 aa6.22□□□□□ -1.41
CCDC7-208ENST00000537047 C11orf44Q8N8P7 122 aa6.22□□□□□ -1.41
CCDC7-208ENST00000537047 EDC3Q96F86 508 aaKnown RBP6.22□□□□□ -1.41
CCDC7-208ENST00000537047 AIFM3Q96NN9 605 aa6.22□□□□□ -1.41
CCDC7-208ENST00000537047 PPP1R9BQ96SB3 815 aa6.22□□□□□ -1.41
CCDC7-208ENST00000537047 A1CFQ9NQ94 594 aaKnown RBP6.22□□□□□ -1.41
CCDC7-208ENST00000537047 PNMA8BQ9ULN7 279 aaPredicted RBP6.22□□□□□ -1.41
CCDC7-208ENST00000537047 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.22□□□□□ -1.41
CCDC7-208ENST00000537047 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.21□□□□□ -1.42
CCDC7-208ENST00000537047 PYCARD-AS1I3L0S3 204 aa6.21□□□□□ -1.42
CCDC7-208ENST00000537047 M0R3H8 397 aa6.21□□□□□ -1.42
CCDC7-208ENST00000537047 AKAP10O43572 662 aa6.21□□□□□ -1.42
CCDC7-208ENST00000537047 CNOT3O75175 753 aaKnown RBP6.21□□□□□ -1.42
CCDC7-208ENST00000537047 TUSC2O75896 110 aa6.21□□□□□ -1.42
CCDC7-208ENST00000537047 NTSR1P30989 418 aa6.21□□□□□ -1.42
CCDC7-208ENST00000537047 MTHFSP49914 203 aa6.21□□□□□ -1.42
CCDC7-208ENST00000537047 RAB27AP51159 221 aa6.21□□□□□ -1.42
CCDC7-208ENST00000537047 SUMO3P55854 103 aaPredicted RBP6.21□□□□□ -1.42
CCDC7-208ENST00000537047 NPY5RQ15761 445 aa6.21□□□□□ -1.42
CCDC7-208ENST00000537047 CC2D1BQ5T0F9 858 aaKnown RBP6.21□□□□□ -1.42
CCDC7-208ENST00000537047 DEF8Q6ZN54 512 aa6.21□□□□□ -1.42
CCDC7-208ENST00000537047 C9orf47Q6ZRZ4 202 aa6.21□□□□□ -1.42
CCDC7-208ENST00000537047 WIPF2Q8TF74 440 aaPredicted RBP6.21□□□□□ -1.42
CCDC7-208ENST00000537047 C22orf23Q9BZE7 217 aa6.21□□□□□ -1.42
CCDC7-208ENST00000537047 SACM1LQ9NTJ5 587 aa6.21□□□□□ -1.42
CCDC7-208ENST00000537047 FYB1O15117 783 aa6.2□□□□□ -1.42
CCDC7-208ENST00000537047 TMPRSS11DO60235 418 aa6.2□□□□□ -1.42
CCDC7-208ENST00000537047 RASSF9O75901 435 aa6.2□□□□□ -1.42
CCDC7-208ENST00000537047 ME1P48163 572 aa6.2□□□□□ -1.42
CCDC7-208ENST00000537047 PGDP52209 483 aa6.2□□□□□ -1.42
CCDC7-208ENST00000537047 CFHR3Q02985 330 aa6.2□□□□□ -1.42
CCDC7-208ENST00000537047 STK3Q13188 491 aa6.2□□□□□ -1.42
CCDC7-208ENST00000537047 C4orf46Q504U0 113 aa6.2□□□□□ -1.42
CCDC7-208ENST00000537047 C3orf38Q5JPI3 329 aa6.2□□□□□ -1.42
CCDC7-208ENST00000537047 COLCA1Q6ZS62 124 aa6.2□□□□□ -1.42
CCDC7-208ENST00000537047 MAEAQ7L5Y9 396 aa6.2□□□□□ -1.42
CCDC7-208ENST00000537047 CHPFQ8IZ52 775 aa6.2□□□□□ -1.42
CCDC7-208ENST00000537047 SPATA3Q8NHX4 192 aa6.2□□□□□ -1.42
CCDC7-208ENST00000537047 ZCRB1Q8TBF4 217 aaKnown RBP6.2□□□□□ -1.42
CCDC7-208ENST00000537047 STK31Q9BXU1 1019 aa6.2□□□□□ -1.42
CCDC7-208ENST00000537047 ZBTB40Q9NUA8 1239 aa6.2□□□□□ -1.42
CCDC7-208ENST00000537047 RIMKLBQ9ULI2 386 aa6.2□□□□□ -1.42
CCDC7-208ENST00000537047 LOC102723971A0A1B0GUV8 181 aa6.19□□□□□ -1.42
CCDC7-208ENST00000537047 TRIM43BA6NCK2 446 aa6.19□□□□□ -1.42
CCDC7-208ENST00000537047 OAZ2O95190 189 aa6.19□□□□□ -1.42
CCDC7-208ENST00000537047 PARP1P09874 1014 aaKnown RBP6.19□□□□□ -1.42
CCDC7-208ENST00000537047 TNFRSF1BP20333 461 aa6.19□□□□□ -1.42
CCDC7-208ENST00000537047 GATMP50440 423 aa6.19□□□□□ -1.42
CCDC7-208ENST00000537047 RPS13P62277 151 aaKnown RBP6.19□□□□□ -1.42
CCDC7-208ENST00000537047 MTX1Q13505 466 aa6.19□□□□□ -1.42
CCDC7-208ENST00000537047 INSCQ1MX18 579 aa6.19□□□□□ -1.42
CCDC7-208ENST00000537047 ZNF750Q32MQ0 723 aa6.19□□□□□ -1.42
CCDC7-208ENST00000537047 PELI3Q8N2H9 469 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms