RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 ZC3H12CQ9C0D7 883 aaKnown RBP5.59□□□□□ -1.52
PTPRD-213ENST00000537002 EPB41L4BQ9H329 900 aa5.59□□□□□ -1.52
PTPRD-213ENST00000537002 DDX56Q9NY93 547 aaKnown RBP5.59□□□□□ -1.52
PTPRD-213ENST00000537002 HESX1Q9UBX0 185 aa5.59□□□□□ -1.52
PTPRD-213ENST00000537002 PPME1Q9Y570 386 aa5.59□□□□□ -1.52
PTPRD-213ENST00000537002 SETD1BQ9UPS6 1966 aaKnown RBP5.59□□□□□ -1.52
PTPRD-213ENST00000537002 ADAMTS7Q9UKP4 1686 aa5.59□□□□□ -1.52
PTPRD-213ENST00000537002 ZBTB39O15060 712 aa5.59□□□□□ -1.52
PTPRD-213ENST00000537002 S100A5P33763 92 aa5.59□□□□□ -1.52
PTPRD-213ENST00000537002 PEX3P56589 373 aa5.59□□□□□ -1.52
PTPRD-213ENST00000537002 EIF3EP60228 445 aaKnown RBP5.59□□□□□ -1.52
PTPRD-213ENST00000537002 POU5F1BQ06416 359 aa5.59□□□□□ -1.52
PTPRD-213ENST00000537002 TRAF2Q12933 501 aa5.59□□□□□ -1.52
PTPRD-213ENST00000537002 MRPL28Q13084 256 aaKnown RBP5.59□□□□□ -1.52
PTPRD-213ENST00000537002 AADACL2Q6P093 401 aa5.59□□□□□ -1.52
PTPRD-213ENST00000537002 ARCQ7LC44 396 aa5.59□□□□□ -1.52
PTPRD-213ENST00000537002 ZNF555Q8NEP9 628 aa5.59□□□□□ -1.52
PTPRD-213ENST00000537002 REEP2Q9BRK0 252 aa5.59□□□□□ -1.52
PTPRD-213ENST00000537002 RTFDC1Q9BY42 306 aaPredicted RBP5.59□□□□□ -1.52
PTPRD-213ENST00000537002 SALL4Q9UJQ4 1053 aa5.59□□□□□ -1.52
PTPRD-213ENST00000537002 GINS2Q9Y248 185 aa5.59□□□□□ -1.52
PTPRD-213ENST00000537002 ASNA1O43681 348 aa5.58□□□□□ -1.52
PTPRD-213ENST00000537002 FAM189A1O60320 539 aa5.58□□□□□ -1.52
PTPRD-213ENST00000537002 WDR47O94967 919 aa5.58□□□□□ -1.52
PTPRD-213ENST00000537002 CCDC130P13994 396 aa5.58□□□□□ -1.52
PTPRD-213ENST00000537002 GNA15P30679 374 aa5.58□□□□□ -1.52
PTPRD-213ENST00000537002 HALP42357 657 aa5.58□□□□□ -1.52
PTPRD-213ENST00000537002 SCNN1DP51172 638 aa5.58□□□□□ -1.52
PTPRD-213ENST00000537002 HK2P52789 917 aa5.58□□□□□ -1.52
PTPRD-213ENST00000537002 IFNEQ86WN2 208 aa5.58□□□□□ -1.52
PTPRD-213ENST00000537002 PRELID2Q8N945 189 aa5.58□□□□□ -1.52
PTPRD-213ENST00000537002 RBM15BQ8NDT2 890 aaKnown RBP5.58□□□□□ -1.52
PTPRD-213ENST00000537002 SEPT9Q9UHD8 586 aaPredicted RBP5.58□□□□□ -1.52
PTPRD-213ENST00000537002 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.58□□□□□ -1.52
PTPRD-213ENST00000537002 RICTORQ6R327 1708 aa5.58□□□□□ -1.52
PTPRD-213ENST00000537002 EPHB6O15197 1021 aa5.58□□□□□ -1.52
PTPRD-213ENST00000537002 KLHL41O60662 606 aa5.58□□□□□ -1.52
PTPRD-213ENST00000537002 SNRPAP09012 282 aaKnown RBP5.58□□□□□ -1.52
PTPRD-213ENST00000537002 BMP3P12645 472 aa5.58□□□□□ -1.52
PTPRD-213ENST00000537002 CDH3P22223 829 aa5.58□□□□□ -1.52
PTPRD-213ENST00000537002 PON1P27169 355 aa5.58□□□□□ -1.52
PTPRD-213ENST00000537002 ADSLP30566 484 aaPredicted RBP5.58□□□□□ -1.52
PTPRD-213ENST00000537002 PTGIRP43119 386 aa5.58□□□□□ -1.52
PTPRD-213ENST00000537002 ATN1P54259 1190 aaPredicted RBP5.58□□□□□ -1.52
PTPRD-213ENST00000537002 BMPR2Q13873 1038 aa5.58□□□□□ -1.52
PTPRD-213ENST00000537002 BCL2A1Q16548 175 aa5.58□□□□□ -1.52
PTPRD-213ENST00000537002 IRF2BP2Q7Z5L9 587 aa5.58□□□□□ -1.52
PTPRD-213ENST00000537002 NLRP10Q86W26 655 aa5.58□□□□□ -1.52
PTPRD-213ENST00000537002 RCOR2Q8IZ40 523 aa5.58□□□□□ -1.52
PTPRD-213ENST00000537002 CLEC4FQ8N1N0 589 aa5.58□□□□□ -1.52
PTPRD-213ENST00000537002 KIAA0895Q8NCT3 520 aa5.58□□□□□ -1.52
PTPRD-213ENST00000537002 MAGED4Q96JG8 741 aa5.58□□□□□ -1.52
PTPRD-213ENST00000537002 MED10Q9BTT4 135 aa5.58□□□□□ -1.52
PTPRD-213ENST00000537002 GPBP1L1Q9HC44 474 aaPredicted RBP5.58□□□□□ -1.52
PTPRD-213ENST00000537002 SELENONQ9NZV5 590 aa5.58□□□□□ -1.52
PTPRD-213ENST00000537002 NENFQ9UMX5 172 aa5.58□□□□□ -1.52
PTPRD-213ENST00000537002 PSMD13Q9UNM6 376 aa5.58□□□□□ -1.52
PTPRD-213ENST00000537002 CDYLQ9Y232 598 aa5.58□□□□□ -1.52
PTPRD-213ENST00000537002 IVNS1ABPQ9Y6Y0 642 aa5.58□□□□□ -1.52
PTPRD-213ENST00000537002 MYH2Q9UKX2 1941 aa5.58□□□□□ -1.52
PTPRD-213ENST00000537002 AFDNP55196 1824 aaKnown RBP5.58□□□□□ -1.52
PTPRD-213ENST00000537002 WBP4O75554 376 aaKnown RBP5.58□□□□□ -1.52
PTPRD-213ENST00000537002 NTRK1P04629 796 aa5.58□□□□□ -1.52
PTPRD-213ENST00000537002 CSF1RP07333 972 aa5.58□□□□□ -1.52
PTPRD-213ENST00000537002 OSTNP61366 133 aa5.58□□□□□ -1.52
PTPRD-213ENST00000537002 RPS8P62241 208 aaKnown RBP5.58□□□□□ -1.52
PTPRD-213ENST00000537002 CCNG2Q16589 344 aa5.58□□□□□ -1.52
PTPRD-213ENST00000537002 PDPK2PQ6A1A2 396 aa5.58□□□□□ -1.52
PTPRD-213ENST00000537002 GLMNQ92990 594 aa5.58□□□□□ -1.52
PTPRD-213ENST00000537002 CNDP1Q96KN2 507 aa5.58□□□□□ -1.52
PTPRD-213ENST00000537002 FAM213AQ9BRX8 229 aa5.58□□□□□ -1.52
PTPRD-213ENST00000537002 S100A14Q9HCY8 104 aa5.58□□□□□ -1.52
PTPRD-213ENST00000537002 FLT1P17948 1338 aa5.58□□□□□ -1.52
PTPRD-213ENST00000537002 NRXN3Q9Y4C0 1643 aa5.58□□□□□ -1.52
PTPRD-213ENST00000537002 USP17L10C9JJH3 530 aa5.58□□□□□ -1.52
PTPRD-213ENST00000537002 FSCN2O14926 492 aa5.58□□□□□ -1.52
PTPRD-213ENST00000537002 EIF3DO15371 548 aaKnown RBP eCLIP5.58□□□□□ -1.52
PTPRD-213ENST00000537002 CCNT2O60583 730 aaKnown RBP5.58□□□□□ -1.52
PTPRD-213ENST00000537002 RPA3P35244 121 aaPredicted RBP5.58□□□□□ -1.52
PTPRD-213ENST00000537002 DEFA1P59665 94 aa5.58□□□□□ -1.52
PTPRD-213ENST00000537002 DEFA3P59666 94 aa5.58□□□□□ -1.52
PTPRD-213ENST00000537002 TFAMQ00059 246 aaKnown RBP5.58□□□□□ -1.52
PTPRD-213ENST00000537002 GRB10Q13322 594 aa5.58□□□□□ -1.52
PTPRD-213ENST00000537002 TUBA3CQ13748 450 aa5.58□□□□□ -1.52
PTPRD-213ENST00000537002 TFDP2Q14188 446 aa5.58□□□□□ -1.52
PTPRD-213ENST00000537002 NR1D2Q14995 579 aa5.58□□□□□ -1.52
PTPRD-213ENST00000537002 BMT2Q1RMZ1 405 aa5.58□□□□□ -1.52
PTPRD-213ENST00000537002 EARS2Q5JPH6 523 aaKnown RBP5.58□□□□□ -1.52
PTPRD-213ENST00000537002 DEPDC1Q5TB30 811 aa5.58□□□□□ -1.52
PTPRD-213ENST00000537002 DDIASQ8IXT1 998 aa5.58□□□□□ -1.52
PTPRD-213ENST00000537002 GIPC3Q8TF64 312 aa5.58□□□□□ -1.52
PTPRD-213ENST00000537002 UPF1Q92900 1129 aaKnown RBP eCLIP5.58□□□□□ -1.52
PTPRD-213ENST00000537002 C1orf50Q9BV19 199 aa5.58□□□□□ -1.52
PTPRD-213ENST00000537002 COPS7BQ9H9Q2 264 aaPredicted RBP5.58□□□□□ -1.52
PTPRD-213ENST00000537002 SLC38A10Q9HBR0 1119 aa5.58□□□□□ -1.52
PTPRD-213ENST00000537002 KCND2Q9NZV8 630 aa5.58□□□□□ -1.52
PTPRD-213ENST00000537002 KIF17Q9P2E2 1029 aa5.58□□□□□ -1.52
PTPRD-213ENST00000537002 ITGA11Q9UKX5 1188 aa5.58□□□□□ -1.52
PTPRD-213ENST00000537002 PRPF19Q9UMS4 504 aaKnown RBP5.58□□□□□ -1.52
PTPRD-213ENST00000537002 ANGPTL3Q9Y5C1 460 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms