RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-208ENST00000536710 NXPH1P58417 271 aa6.2□□□□□ -1.42
PRKDC-208ENST00000536710 TIRAPP58753 221 aa6.2□□□□□ -1.42
PRKDC-208ENST00000536710 FBXO47Q5MNV8 452 aa6.2□□□□□ -1.42
PRKDC-208ENST00000536710 TREML2Q5T2D2 321 aa6.2□□□□□ -1.42
PRKDC-208ENST00000536710 LVRNQ6Q4G3 990 aa6.2□□□□□ -1.42
PRKDC-208ENST00000536710 RAB11FIP2Q7L804 512 aa6.2□□□□□ -1.42
PRKDC-208ENST00000536710 MAVSQ7Z434 540 aa6.2□□□□□ -1.42
PRKDC-208ENST00000536710 GPR149Q86SP6 731 aa6.2□□□□□ -1.42
PRKDC-208ENST00000536710 DTX2Q86UW9 622 aa6.2□□□□□ -1.42
PRKDC-208ENST00000536710 CLASRPQ8N2M8 674 aaKnown RBP6.2□□□□□ -1.42
PRKDC-208ENST00000536710 SUN3Q8TAQ9 357 aa6.2□□□□□ -1.42
PRKDC-208ENST00000536710 CSGALNACT1Q8TDX6 532 aa6.2□□□□□ -1.42
PRKDC-208ENST00000536710 DVL3Q92997 716 aaPredicted RBP6.2□□□□□ -1.42
PRKDC-208ENST00000536710 FBXL20Q96IG2 436 aa6.2□□□□□ -1.42
PRKDC-208ENST00000536710 C20orf173Q96LM9 149 aa6.2□□□□□ -1.42
PRKDC-208ENST00000536710 TBATAQ96M53 351 aa6.2□□□□□ -1.42
PRKDC-208ENST00000536710 PYM1Q9BRP8 204 aaKnown RBP6.2□□□□□ -1.42
PRKDC-208ENST00000536710 KRTAP4-6Q9BYQ5 205 aa6.2□□□□□ -1.42
PRKDC-208ENST00000536710 NRDE2Q9H7Z3 1164 aa6.2□□□□□ -1.42
PRKDC-208ENST00000536710 FSCN3Q9NQT6 498 aa6.2□□□□□ -1.42
PRKDC-208ENST00000536710 NKX1-2Q9UD57 310 aaPredicted RBP6.2□□□□□ -1.42
PRKDC-208ENST00000536710 STEAP1Q9UHE8 339 aa6.2□□□□□ -1.42
PRKDC-208ENST00000536710 PNMA2Q9UL42 364 aa6.2□□□□□ -1.42
PRKDC-208ENST00000536710 TESMINQ9Y4I5 508 aa6.2□□□□□ -1.42
PRKDC-208ENST00000536710 TMEM200CA6NKL6 621 aa6.19□□□□□ -1.42
PRKDC-208ENST00000536710 B9A039 149 aa6.19□□□□□ -1.42
PRKDC-208ENST00000536710 PLSCR1O15162 318 aa6.19□□□□□ -1.42
PRKDC-208ENST00000536710 TAF5LO75529 589 aa6.19□□□□□ -1.42
PRKDC-208ENST00000536710 KRT38O76015 456 aa6.19□□□□□ -1.42
PRKDC-208ENST00000536710 SRGNP10124 158 aa6.19□□□□□ -1.42
PRKDC-208ENST00000536710 GSTM5P46439 218 aa6.19□□□□□ -1.42
PRKDC-208ENST00000536710 AARSP49588 968 aaKnown RBP eCLIP6.19□□□□□ -1.42
PRKDC-208ENST00000536710 PAPOLAP51003 745 aaKnown RBP6.19□□□□□ -1.42
PRKDC-208ENST00000536710 PDE1AP54750 535 aa6.19□□□□□ -1.42
PRKDC-208ENST00000536710 CTSWP56202 376 aa6.19□□□□□ -1.42
PRKDC-208ENST00000536710 TEDDM1Q5T9Z0 273 aa6.19□□□□□ -1.42
PRKDC-208ENST00000536710 JAKMIP3Q5VZ66 844 aa6.19□□□□□ -1.42
PRKDC-208ENST00000536710 NFRKBQ6P4R8 1299 aa6.19□□□□□ -1.42
PRKDC-208ENST00000536710 TTLL10Q6ZVT0 673 aa6.19□□□□□ -1.42
PRKDC-208ENST00000536710 P3H2Q8IVL5 708 aa6.19□□□□□ -1.42
PRKDC-208ENST00000536710 METTL25Q8N6Q8 603 aa6.19□□□□□ -1.42
PRKDC-208ENST00000536710 TEX19Q8NA77 164 aa6.19□□□□□ -1.42
PRKDC-208ENST00000536710 SUPT20HQ8NEM7 779 aa6.19□□□□□ -1.42
PRKDC-208ENST00000536710 CXorf38Q8TB03 319 aa6.19□□□□□ -1.42
PRKDC-208ENST00000536710 GOLGA1Q92805 767 aa6.19□□□□□ -1.42
PRKDC-208ENST00000536710 USP13Q92995 863 aaPredicted RBP6.19□□□□□ -1.42
PRKDC-208ENST00000536710 NUDT22Q9BRQ3 303 aa6.19□□□□□ -1.42
PRKDC-208ENST00000536710 MAF1Q9H063 256 aa6.19□□□□□ -1.42
PRKDC-208ENST00000536710 ZNF703Q9H7S9 590 aaPredicted RBP6.19□□□□□ -1.42
PRKDC-208ENST00000536710 VPS45Q9NRW7 570 aa6.19□□□□□ -1.42
PRKDC-208ENST00000536710 CNOT11Q9UKZ1 510 aaKnown RBP6.19□□□□□ -1.42
PRKDC-208ENST00000536710 DAPP1Q9UN19 280 aa6.19□□□□□ -1.42
PRKDC-208ENST00000536710 CENPVL1A0A0U1RR11 272 aa6.18□□□□□ -1.42
PRKDC-208ENST00000536710 ZAR1LA6NP61 321 aa6.18□□□□□ -1.42
PRKDC-208ENST00000536710 YY2O15391 372 aa6.18□□□□□ -1.42
PRKDC-208ENST00000536710 WDR47O94967 919 aa6.18□□□□□ -1.42
PRKDC-208ENST00000536710 CER1O95813 267 aa6.18□□□□□ -1.42
PRKDC-208ENST00000536710 C1SP09871 688 aa6.18□□□□□ -1.42
PRKDC-208ENST00000536710 TMEM225BP0DP42 221 aa6.18□□□□□ -1.42
PRKDC-208ENST00000536710 RXRAP19793 462 aa6.18□□□□□ -1.42
PRKDC-208ENST00000536710 HTR7P34969 479 aa6.18□□□□□ -1.42
PRKDC-208ENST00000536710 PTGS2P35354 604 aa6.18□□□□□ -1.42
PRKDC-208ENST00000536710 EIF4A1P60842 406 aaKnown RBP6.18□□□□□ -1.42
PRKDC-208ENST00000536710 BFSP2Q13515 415 aa6.18□□□□□ -1.42
PRKDC-208ENST00000536710 FHL3Q13643 280 aa6.18□□□□□ -1.42
PRKDC-208ENST00000536710 TMEM196Q5HYL7 178 aa6.18□□□□□ -1.42
PRKDC-208ENST00000536710 KCNV1Q6PIU1 500 aa6.18□□□□□ -1.42
PRKDC-208ENST00000536710 KRT27Q7Z3Y8 459 aa6.18□□□□□ -1.42
PRKDC-208ENST00000536710 RAB11FIP4Q86YS3 637 aa6.18□□□□□ -1.42
PRKDC-208ENST00000536710 OR6Y1Q8NGX8 325 aa6.18□□□□□ -1.42
PRKDC-208ENST00000536710 SPPL3Q8TCT6 385 aa6.18□□□□□ -1.42
PRKDC-208ENST00000536710 HMGB4Q8WW32 186 aa6.18□□□□□ -1.42
PRKDC-208ENST00000536710 ASB10Q8WXI3 467 aa6.18□□□□□ -1.42
PRKDC-208ENST00000536710 THAP4Q8WY91 577 aa6.18□□□□□ -1.42
PRKDC-208ENST00000536710 RSC1A1Q92681 617 aa6.18□□□□□ -1.42
PRKDC-208ENST00000536710 HAS1Q92839 578 aa6.18□□□□□ -1.42
PRKDC-208ENST00000536710 PGBD1Q96JS3 809 aa6.18□□□□□ -1.42
PRKDC-208ENST00000536710 WDR24Q96S15 920 aa6.18□□□□□ -1.42
PRKDC-208ENST00000536710 GPR20Q99678 358 aa6.18□□□□□ -1.42
PRKDC-208ENST00000536710 DDX23Q9BUQ8 820 aaKnown RBP6.18□□□□□ -1.42
PRKDC-208ENST00000536710 RIC8AQ9NPQ8 531 aa6.18□□□□□ -1.42
PRKDC-208ENST00000536710 FEM1BQ9UK73 627 aa6.18□□□□□ -1.42
PRKDC-208ENST00000536710 FZD1Q9UP38 647 aa6.18□□□□□ -1.42
PRKDC-208ENST00000536710 REXO2Q9Y3B8 237 aaKnown RBP6.18□□□□□ -1.42
PRKDC-208ENST00000536710 COL15A1P39059 1388 aa6.18□□□□□ -1.42
PRKDC-208ENST00000536710 EFCAB8A8MWE9 144 aa6.17□□□□□ -1.42
PRKDC-208ENST00000536710 KIF28PB7ZC32 967 aa6.17□□□□□ -1.42
PRKDC-208ENST00000536710 H0Y3Z8 333 aa6.17□□□□□ -1.42
PRKDC-208ENST00000536710 PEX1O43933 1283 aa6.17□□□□□ -1.42
PRKDC-208ENST00000536710 RPP40O75818 363 aaKnown RBP6.17□□□□□ -1.42
PRKDC-208ENST00000536710 FAM155BO75949 473 aa6.17□□□□□ -1.42
PRKDC-208ENST00000536710 POLBP06746 335 aa6.17□□□□□ -1.42
PRKDC-208ENST00000536710 PBX1P40424 430 aa6.17□□□□□ -1.42
PRKDC-208ENST00000536710 ADAM17P78536 824 aa6.17□□□□□ -1.42
PRKDC-208ENST00000536710 CLCA4Q14CN2 919 aa6.17□□□□□ -1.42
PRKDC-208ENST00000536710 ZNF618Q5T7W0 954 aa6.17□□□□□ -1.42
PRKDC-208ENST00000536710 VWA1Q6PCB0 445 aa6.17□□□□□ -1.42
PRKDC-208ENST00000536710 DPY19L3Q6ZPD9 716 aa6.17□□□□□ -1.42
PRKDC-208ENST00000536710 RNF207Q6ZRF8 634 aa6.17□□□□□ -1.42
PRKDC-208ENST00000536710 ARHGEF19Q8IW93 802 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms