RNA–Protein interactions for RNA: ENST00000536708.6

CDK5RAP3-202, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2 BASIC

Gene CDK5RAP3, Length 1,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-202ENST00000536708 TMEM209Q96SK2 561 aa13.56□□□□□ -0.24
CDK5RAP3-202ENST00000536708 MRPL9Q9BYD2 267 aaKnown RBP13.56□□□□□ -0.24
CDK5RAP3-202ENST00000536708 SEMA4AQ9H3S1 761 aa13.56□□□□□ -0.24
CDK5RAP3-202ENST00000536708 CRTAC1Q9NQ79 661 aa13.56□□□□□ -0.24
CDK5RAP3-202ENST00000536708 CCDC85CA6NKD9 419 aa13.56□□□□□ -0.24
CDK5RAP3-202ENST00000536708 PFKMP08237 780 aa13.56□□□□□ -0.24
CDK5RAP3-202ENST00000536708 ITIH2P19823 946 aa13.56□□□□□ -0.24
CDK5RAP3-202ENST00000536708 GSCP56915 257 aaPredicted RBP13.56□□□□□ -0.24
CDK5RAP3-202ENST00000536708 PPIGQ13427 754 aaKnown RBP eCLIP13.56□□□□□ -0.248e-9■■■■□ 23.1
CDK5RAP3-202ENST00000536708 MON1BQ7L1V2 547 aa13.56□□□□□ -0.24
CDK5RAP3-202ENST00000536708 UNC93AQ86WB7 457 aa13.56□□□□□ -0.24
CDK5RAP3-202ENST00000536708 TTC30AQ86WT1 665 aa13.56□□□□□ -0.24
CDK5RAP3-202ENST00000536708 OR10T2Q8NGX3 314 aa13.56□□□□□ -0.24
CDK5RAP3-202ENST00000536708 XPO6Q96QU8 1125 aaKnown RBP13.56□□□□□ -0.24
CDK5RAP3-202ENST00000536708 RHOBTB2Q9BYZ6 727 aa13.56□□□□□ -0.24
CDK5RAP3-202ENST00000536708 GPR62Q9BZJ7 368 aa13.56□□□□□ -0.24
CDK5RAP3-202ENST00000536708 STMN4Q9H169 189 aaPredicted RBP13.56□□□□□ -0.24
CDK5RAP3-202ENST00000536708 ADAM7Q9H2U9 754 aa13.56□□□□□ -0.24
CDK5RAP3-202ENST00000536708 CCDC134Q9H6E4 229 aa13.56□□□□□ -0.24
CDK5RAP3-202ENST00000536708 CWH43Q9H720 699 aa13.56□□□□□ -0.24
CDK5RAP3-202ENST00000536708 HOMER3Q9NSC5 361 aa13.56□□□□□ -0.24
CDK5RAP3-202ENST00000536708 ADAM28Q9UKQ2 775 aa13.56□□□□□ -0.24
CDK5RAP3-202ENST00000536708 PCDHGC3Q9UN70 934 aa13.56□□□□□ -0.24
CDK5RAP3-202ENST00000536708 MYO16Q9Y6X6 1858 aa13.56□□□□□ -0.24
CDK5RAP3-202ENST00000536708 TMEM189-UBE2V1I3L0A0 370 aa13.55□□□□□ -0.24
CDK5RAP3-202ENST00000536708 PIK3R2O00459 728 aa13.55□□□□□ -0.24
CDK5RAP3-202ENST00000536708 CLDN5O00501 218 aa13.55□□□□□ -0.24
CDK5RAP3-202ENST00000536708 TP73O15350 636 aa13.55□□□□□ -0.24
CDK5RAP3-202ENST00000536708 PROSCO94903 275 aa13.55□□□□□ -0.24
CDK5RAP3-202ENST00000536708 GJB6O95452 261 aa13.55□□□□□ -0.24
CDK5RAP3-202ENST00000536708 GALTP07902 379 aa13.55□□□□□ -0.24
CDK5RAP3-202ENST00000536708 VDRP11473 427 aa13.55□□□□□ -0.24
CDK5RAP3-202ENST00000536708 RRM1P23921 792 aa13.55□□□□□ -0.24
CDK5RAP3-202ENST00000536708 NSFP46459 744 aaKnown RBP13.55□□□□□ -0.24
CDK5RAP3-202ENST00000536708 RABGGTBP53611 331 aa13.55□□□□□ -0.24
CDK5RAP3-202ENST00000536708 PTK6Q13882 451 aa13.55□□□□□ -0.24
CDK5RAP3-202ENST00000536708 MDH1BQ5I0G3 518 aa13.55□□□□□ -0.24
CDK5RAP3-202ENST00000536708 TMEM240Q5SV17 173 aa13.55□□□□□ -0.24
CDK5RAP3-202ENST00000536708 CYP4A22Q5TCH4 519 aa13.55□□□□□ -0.24
CDK5RAP3-202ENST00000536708 SLC2A14Q8TDB8 520 aa13.55□□□□□ -0.24
CDK5RAP3-202ENST00000536708 GRK7Q8WTQ7 553 aa13.55□□□□□ -0.24
CDK5RAP3-202ENST00000536708 ZNF689Q96CS4 500 aaPredicted RBP13.55□□□□□ -0.24
CDK5RAP3-202ENST00000536708 SYT15Q9BQS2 421 aa13.55□□□□□ -0.24
CDK5RAP3-202ENST00000536708 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.55□□□□□ -0.24
CDK5RAP3-202ENST00000536708 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.55□□□□□ -0.24
CDK5RAP3-202ENST00000536708 MRPL42Q9Y6G3 142 aaKnown RBP13.55□□□□□ -0.24
CDK5RAP3-202ENST00000536708 RGS16O15492 202 aaPredicted RBP13.54□□□□□ -0.24
CDK5RAP3-202ENST00000536708 PSTPIP1O43586 416 aa13.54□□□□□ -0.24
CDK5RAP3-202ENST00000536708 BAIAP3O94812 1187 aa13.54□□□□□ -0.24
CDK5RAP3-202ENST00000536708 IVDP26440 423 aa13.54□□□□□ -0.24
CDK5RAP3-202ENST00000536708 KCNJ1P48048 391 aa13.54□□□□□ -0.24
CDK5RAP3-202ENST00000536708 CAV1Q03135 178 aa13.54□□□□□ -0.24
CDK5RAP3-202ENST00000536708 CALCOCO2Q13137 446 aa13.54□□□□□ -0.24
CDK5RAP3-202ENST00000536708 PTPN20Q4JDL3 420 aa13.54□□□□□ -0.24
CDK5RAP3-202ENST00000536708 OVOS1Q6IE37 1185 aa13.54□□□□□ -0.24
CDK5RAP3-202ENST00000536708 PHF13Q86YI8 300 aaPredicted RBP13.54□□□□□ -0.24
CDK5RAP3-202ENST00000536708 TMEM86AQ8N2M4 240 aa13.54□□□□□ -0.24
CDK5RAP3-202ENST00000536708 TTC39CQ8N584 583 aa13.54□□□□□ -0.24
CDK5RAP3-202ENST00000536708 CPXM1Q96SM3 734 aa13.54□□□□□ -0.24
CDK5RAP3-202ENST00000536708 VN1R3Q9BXE9 311 aa13.54□□□□□ -0.24
CDK5RAP3-202ENST00000536708 FAM124BQ9H5Z6 455 aaPredicted RBP13.54□□□□□ -0.24
CDK5RAP3-202ENST00000536708 TMEM30AQ9NV96 361 aa13.54□□□□□ -0.24
CDK5RAP3-202ENST00000536708 MYBPHLA2RUH7 354 aa13.54□□□□□ -0.24
CDK5RAP3-202ENST00000536708 H0YHG0 523 aa13.54□□□□□ -0.24
CDK5RAP3-202ENST00000536708 MED7O43513 233 aa13.54□□□□□ -0.24
CDK5RAP3-202ENST00000536708 TADA2AO75478 443 aa13.54□□□□□ -0.24
CDK5RAP3-202ENST00000536708 FGBP02675 491 aa13.54□□□□□ -0.24
CDK5RAP3-202ENST00000536708 CYP11A1P05108 521 aa13.54□□□□□ -0.24
CDK5RAP3-202ENST00000536708 OR4Q2P0C623 313 aa13.54□□□□□ -0.24
CDK5RAP3-202ENST00000536708 DRD4P21917 467 aa13.54□□□□□ -0.24
CDK5RAP3-202ENST00000536708 KLF1Q13351 362 aaPredicted RBP13.54□□□□□ -0.24
CDK5RAP3-202ENST00000536708 LIN9Q5TKA1 542 aa13.54□□□□□ -0.24
CDK5RAP3-202ENST00000536708 PLEKHA7Q6IQ23 1121 aa13.54□□□□□ -0.24
CDK5RAP3-202ENST00000536708 CEP57Q86XR8 500 aa13.54□□□□□ -0.24
CDK5RAP3-202ENST00000536708 FUKQ8N0W3 1084 aa13.54□□□□□ -0.24
CDK5RAP3-202ENST00000536708 CRYBG2Q8N1P7 616 aa13.54□□□□□ -0.24
CDK5RAP3-202ENST00000536708 ATXN2LQ8WWM7 1075 aaKnown RBP13.54□□□□□ -0.24
CDK5RAP3-202ENST00000536708 DPF3Q92784 378 aa13.54□□□□□ -0.24
CDK5RAP3-202ENST00000536708 P3H4Q92791 437 aa13.54□□□□□ -0.24
CDK5RAP3-202ENST00000536708 TRIM7Q9C029 511 aa13.54□□□□□ -0.24
CDK5RAP3-202ENST00000536708 DCLK3Q9C098 648 aa13.54□□□□□ -0.24
CDK5RAP3-202ENST00000536708 MRPL47Q9HD33 250 aaKnown RBP13.54□□□□□ -0.24
CDK5RAP3-202ENST00000536708 AAASQ9NRG9 546 aa13.54□□□□□ -0.24
CDK5RAP3-202ENST00000536708 TMLHEQ9NVH6 421 aa13.54□□□□□ -0.24
CDK5RAP3-202ENST00000536708 NEU2Q9Y3R4 380 aa13.54□□□□□ -0.24
CDK5RAP3-202ENST00000536708 TRANK1O15050 2925 aa13.54□□□□□ -0.24
CDK5RAP3-202ENST00000536708 LSM8O95777 96 aaKnown RBP13.53□□□□□ -0.24
CDK5RAP3-202ENST00000536708 PTPN1P18031 435 aaKnown RBP13.53□□□□□ -0.24
CDK5RAP3-202ENST00000536708 CDH5P33151 784 aaPredicted RBP13.53□□□□□ -0.24
CDK5RAP3-202ENST00000536708 RGS7P49802 495 aa13.53□□□□□ -0.24
CDK5RAP3-202ENST00000536708 CACNA2D1P54289 1103 aa13.53□□□□□ -0.24
CDK5RAP3-202ENST00000536708 KRT17Q04695 432 aa13.53□□□□□ -0.24
CDK5RAP3-202ENST00000536708 BTG3Q14201 252 aaPredicted RBP13.53□□□□□ -0.24
CDK5RAP3-202ENST00000536708 PPP1R7Q15435 360 aa13.53□□□□□ -0.24
CDK5RAP3-202ENST00000536708 CNGA2Q16280 664 aa13.53□□□□□ -0.24
CDK5RAP3-202ENST00000536708 QPCTQ16769 361 aa13.53□□□□□ -0.24
CDK5RAP3-202ENST00000536708 FAM171A1Q5VUB5 890 aa13.53□□□□□ -0.24
CDK5RAP3-202ENST00000536708 FUT10Q6P4F1 479 aa13.53□□□□□ -0.24
CDK5RAP3-202ENST00000536708 LCLAT1Q6UWP7 414 aa13.53□□□□□ -0.24
CDK5RAP3-202ENST00000536708 TAS1R1Q7RTX1 841 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms