RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 ACO2Q99798 780 aaKnown RBP6.65□□□□□ -1.34
CLIP1-207ENST00000536634 SMOC2Q9H3U7 446 aa6.65□□□□□ -1.34
CLIP1-207ENST00000536634 SYNPO2LQ9H987 977 aa6.65□□□□□ -1.34
CLIP1-207ENST00000536634 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.65□□□□□ -1.34
CLIP1-207ENST00000536634 SAGE1Q9NXZ1 904 aa6.65□□□□□ -1.34
CLIP1-207ENST00000536634 C11orf21Q9P2W6 132 aa6.65□□□□□ -1.34
CLIP1-207ENST00000536634 GABBR1Q9UBS5 961 aa6.65□□□□□ -1.34
CLIP1-207ENST00000536634 NEU2Q9Y3R4 380 aa6.65□□□□□ -1.34
CLIP1-207ENST00000536634 EYSQ5T1H1 3165 aa6.64□□□□□ -1.35
CLIP1-207ENST00000536634 CHEK2O96017 543 aa6.64□□□□□ -1.35
CLIP1-207ENST00000536634 HDCP19113 662 aa6.64□□□□□ -1.35
CLIP1-207ENST00000536634 CHRM3P20309 590 aa6.64□□□□□ -1.35
CLIP1-207ENST00000536634 HTR1BP28222 390 aa6.64□□□□□ -1.35
CLIP1-207ENST00000536634 TOB1P50616 345 aaPredicted RBP6.64□□□□□ -1.35
CLIP1-207ENST00000536634 TEFQ10587 303 aa6.64□□□□□ -1.35
CLIP1-207ENST00000536634 PREPLQ4J6C6 727 aaPredicted RBP6.64□□□□□ -1.35
CLIP1-207ENST00000536634 RGMBQ6NW40 437 aa6.64□□□□□ -1.35
CLIP1-207ENST00000536634 PPP1R32Q7Z5V6 425 aa6.64□□□□□ -1.35
CLIP1-207ENST00000536634 DENND1CQ8IV53 801 aa6.64□□□□□ -1.35
CLIP1-207ENST00000536634 ANKRD13AQ8IZ07 590 aa6.64□□□□□ -1.35
CLIP1-207ENST00000536634 ZBTB34Q8NCN2 500 aa6.64□□□□□ -1.35
CLIP1-207ENST00000536634 PSD4Q8NDX1 1056 aa6.64□□□□□ -1.35
CLIP1-207ENST00000536634 SLC30A5Q8TAD4 765 aa6.64□□□□□ -1.35
CLIP1-207ENST00000536634 LPIN2Q92539 896 aa6.64□□□□□ -1.35
CLIP1-207ENST00000536634 ALG13Q9NP73 1137 aaKnown RBP6.64□□□□□ -1.35
CLIP1-207ENST00000536634 INTS13Q9NVM9 706 aa6.64□□□□□ -1.35
CLIP1-207ENST00000536634 STAP2Q9UGK3 403 aa6.64□□□□□ -1.35
CLIP1-207ENST00000536634 PCDHA6Q9UN73 950 aa6.64□□□□□ -1.35
CLIP1-207ENST00000536634 G3BP2Q9UN86 482 aaKnown RBP6.64□□□□□ -1.35
CLIP1-207ENST00000536634 CEMIPQ8WUJ3 1361 aa6.64□□□□□ -1.35
CLIP1-207ENST00000536634 COL3A1P02461 1466 aaPredicted RBP6.64□□□□□ -1.35
CLIP1-207ENST00000536634 LAMA2P24043 3122 aaKnown RBP6.63□□□□□ -1.35
CLIP1-207ENST00000536634 YDJCA8MPS7 323 aa6.63□□□□□ -1.35
CLIP1-207ENST00000536634 ADM5C9JUS6 153 aa6.63□□□□□ -1.35
CLIP1-207ENST00000536634 H3BML4 177 aa6.63□□□□□ -1.35
CLIP1-207ENST00000536634 UBXN7O94888 489 aa6.63□□□□□ -1.35
CLIP1-207ENST00000536634 BMP5P22003 454 aa6.63□□□□□ -1.35
CLIP1-207ENST00000536634 INHBEP58166 350 aa6.63□□□□□ -1.35
CLIP1-207ENST00000536634 RAB1AP62820 205 aa6.63□□□□□ -1.35
CLIP1-207ENST00000536634 MUC3AQ02505 3323 aa6.63□□□□□ -1.35
CLIP1-207ENST00000536634 TCF15Q12870 199 aa6.63□□□□□ -1.35
CLIP1-207ENST00000536634 GTF2H3Q13889 308 aa6.63□□□□□ -1.35
CLIP1-207ENST00000536634 PPP2R5AQ15172 486 aa6.63□□□□□ -1.35
CLIP1-207ENST00000536634 KIF7Q2M1P5 1343 aa6.63□□□□□ -1.35
CLIP1-207ENST00000536634 TAF2Q6P1X5 1199 aa6.63□□□□□ -1.35
CLIP1-207ENST00000536634 TSHZ1Q6ZSZ6 1077 aa6.63□□□□□ -1.35
CLIP1-207ENST00000536634 UBN2Q6ZU65 1347 aa6.63□□□□□ -1.35
CLIP1-207ENST00000536634 USP37Q86T82 979 aa6.63□□□□□ -1.35
CLIP1-207ENST00000536634 CHPFQ8IZ52 775 aa6.63□□□□□ -1.35
CLIP1-207ENST00000536634 BRIX1Q8TDN6 353 aaKnown RBP6.63□□□□□ -1.35
CLIP1-207ENST00000536634 SNX19Q92543 992 aa6.63□□□□□ -1.35
CLIP1-207ENST00000536634 NT5C1BQ96P26 610 aa6.63□□□□□ -1.35
CLIP1-207ENST00000536634 CNPPD1Q9BV87 410 aa6.63□□□□□ -1.35
CLIP1-207ENST00000536634 RSAD1Q9HA92 442 aa6.63□□□□□ -1.35
CLIP1-207ENST00000536634 DUOX1Q9NRD9 1551 aa6.63□□□□□ -1.35
CLIP1-207ENST00000536634 LAMB4A4D0S4 1761 aa6.62□□□□□ -1.35
CLIP1-207ENST00000536634 LAMB2P55268 1798 aa6.62□□□□□ -1.35
CLIP1-207ENST00000536634 CDHR2Q9BYE9 1310 aa6.62□□□□□ -1.35
CLIP1-207ENST00000536634 E7ENX8 843 aa6.62□□□□□ -1.35
CLIP1-207ENST00000536634 M0QYG6 137 aa6.62□□□□□ -1.35
CLIP1-207ENST00000536634 GNAI2P04899 355 aa6.62□□□□□ -1.35
CLIP1-207ENST00000536634 PPP3CBP16298 524 aa6.62□□□□□ -1.35
CLIP1-207ENST00000536634 IL12RB1P42701 662 aa6.62□□□□□ -1.35
CLIP1-207ENST00000536634 CLK3P49761 638 aaKnown RBP6.62□□□□□ -1.35
CLIP1-207ENST00000536634 SOX8P57073 446 aa6.62□□□□□ -1.35
CLIP1-207ENST00000536634 TAP2Q03519 686 aa6.62□□□□□ -1.35
CLIP1-207ENST00000536634 BOP1Q14137 746 aaKnown RBP6.62□□□□□ -1.35
CLIP1-207ENST00000536634 FAM102BQ5T8I3 360 aa6.62□□□□□ -1.35
CLIP1-207ENST00000536634 EMC10Q5UCC4 262 aa6.62□□□□□ -1.35
CLIP1-207ENST00000536634 VWA1Q6PCB0 445 aa6.62□□□□□ -1.35
CLIP1-207ENST00000536634 MICALCLQ6ZW33 695 aa6.62□□□□□ -1.35
CLIP1-207ENST00000536634 PCSK9Q8NBP7 692 aaKnown RBP6.62□□□□□ -1.35
CLIP1-207ENST00000536634 GBA2Q9HCG7 927 aaPredicted RBP6.62□□□□□ -1.35
CLIP1-207ENST00000536634 CPA4Q9UI42 421 aa6.62□□□□□ -1.35
CLIP1-207ENST00000536634 DMTF1Q9Y222 760 aa6.62□□□□□ -1.35
CLIP1-207ENST00000536634 TAF1P21675 1872 aa6.62□□□□□ -1.35
CLIP1-207ENST00000536634 A0A088AWK7 358 aa6.61□□□□□ -1.35
CLIP1-207ENST00000536634 MGST3O14880 152 aa6.61□□□□□ -1.35
CLIP1-207ENST00000536634 KIAA0355O15063 1070 aa6.61□□□□□ -1.35
CLIP1-207ENST00000536634 DNAJB5O75953 348 aa6.61□□□□□ -1.35
CLIP1-207ENST00000536634 GPTP24298 496 aa6.61□□□□□ -1.35
CLIP1-207ENST00000536634 NPTX2P47972 431 aa6.61□□□□□ -1.35
CLIP1-207ENST00000536634 HLXQ14774 488 aaPredicted RBP6.61□□□□□ -1.35
CLIP1-207ENST00000536634 SMN1Q16637 294 aaKnown RBP6.61□□□□□ -1.35
CLIP1-207ENST00000536634 KHDC1LQ5JSQ8 128 aa6.61□□□□□ -1.35
CLIP1-207ENST00000536634 CXorf57Q6NSI4 855 aaKnown RBP6.61□□□□□ -1.35
CLIP1-207ENST00000536634 OVCH2Q7RTZ1 564 aa6.61□□□□□ -1.35
CLIP1-207ENST00000536634 RASAL3Q86YV0 1011 aa6.61□□□□□ -1.35
CLIP1-207ENST00000536634 MYCBPAPQ8TBZ2 947 aa6.61□□□□□ -1.35
CLIP1-207ENST00000536634 RUNDC1Q96C34 613 aa6.61□□□□□ -1.35
CLIP1-207ENST00000536634 GCC1Q96CN9 775 aa6.61□□□□□ -1.35
CLIP1-207ENST00000536634 ZG16BQ96DA0 208 aa6.61□□□□□ -1.35
CLIP1-207ENST00000536634 MTFMTQ96DP5 389 aaKnown RBP6.61□□□□□ -1.35
CLIP1-207ENST00000536634 RBM17Q96I25 401 aaKnown RBP6.61□□□□□ -1.35
CLIP1-207ENST00000536634 MRGPRX1Q96LB2 322 aa6.61□□□□□ -1.35
CLIP1-207ENST00000536634 CRAMP1Q96RY5 1269 aa6.61□□□□□ -1.35
CLIP1-207ENST00000536634 PRDM13Q9H4Q3 707 aa6.61□□□□□ -1.35
CLIP1-207ENST00000536634 FOXJ2Q9P0K8 574 aa6.61□□□□□ -1.35
CLIP1-207ENST00000536634 CNOT7Q9UIV1 285 aaKnown RBP6.61□□□□□ -1.35
CLIP1-207ENST00000536634 ATP6V0A2Q9Y487 856 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms