RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 TM4SF1P30408 202 aa3.87□□□□□ -1.79
SNHG1-202ENST00000535689 MCM7P33993 719 aa3.87□□□□□ -1.79
SNHG1-202ENST00000535689 TECP42680 631 aa3.87□□□□□ -1.79
SNHG1-202ENST00000535689 TM4SF4P48230 202 aa3.87□□□□□ -1.79
SNHG1-202ENST00000535689 GCLCP48506 637 aaPredicted RBP3.87□□□□□ -1.79
SNHG1-202ENST00000535689 CARSP49589 748 aaKnown RBP3.87□□□□□ -1.79
SNHG1-202ENST00000535689 MTHFSP49914 203 aa3.87□□□□□ -1.79
SNHG1-202ENST00000535689 CXADRP78310 365 aa3.87□□□□□ -1.79
SNHG1-202ENST00000535689 HSD11B2P80365 405 aa3.87□□□□□ -1.79
SNHG1-202ENST00000535689 CTBP1Q13363 440 aa3.87□□□□□ -1.79
SNHG1-202ENST00000535689 TUBB3Q13509 450 aa3.87□□□□□ -1.79
SNHG1-202ENST00000535689 TUBA3CQ13748 450 aa3.87□□□□□ -1.79
SNHG1-202ENST00000535689 ARHGEF7Q14155 803 aa3.87□□□□□ -1.79
SNHG1-202ENST00000535689 KRT72Q14CN4 511 aa3.87□□□□□ -1.79
SNHG1-202ENST00000535689 ERCC6LQ2NKX8 1250 aa3.87□□□□□ -1.79
SNHG1-202ENST00000535689 NOMO2Q5JPE7 1267 aa3.87□□□□□ -1.79
SNHG1-202ENST00000535689 PLAC9Q5JTB6 97 aa3.87□□□□□ -1.79
SNHG1-202ENST00000535689 ARL6IP4Q66PJ3 421 aaKnown RBP3.87□□□□□ -1.79
SNHG1-202ENST00000535689 TUBA3EQ6PEY2 450 aa3.87□□□□□ -1.79
SNHG1-202ENST00000535689 KCNV1Q6PIU1 500 aa3.87□□□□□ -1.79
SNHG1-202ENST00000535689 RNF207Q6ZRF8 634 aa3.87□□□□□ -1.79
SNHG1-202ENST00000535689 CATSPERGQ6ZRH7 1159 aa3.87□□□□□ -1.79
SNHG1-202ENST00000535689 PRRT2Q7Z6L0 340 aaPredicted RBP3.87□□□□□ -1.79
SNHG1-202ENST00000535689 PALM2Q8IXS6 379 aa3.87□□□□□ -1.79
SNHG1-202ENST00000535689 LCORLQ8N3X6 602 aa3.87□□□□□ -1.79
SNHG1-202ENST00000535689 B3GALNT2Q8NCR0 500 aa3.87□□□□□ -1.79
SNHG1-202ENST00000535689 TMIEQ8NEW7 156 aa3.87□□□□□ -1.79
SNHG1-202ENST00000535689 RNF31Q96EP0 1072 aa3.87□□□□□ -1.79
SNHG1-202ENST00000535689 PGBD1Q96JS3 809 aa3.87□□□□□ -1.79
SNHG1-202ENST00000535689 SNX22Q96L94 193 aa3.87□□□□□ -1.79
SNHG1-202ENST00000535689 TBCBQ99426 244 aa3.87□□□□□ -1.79
SNHG1-202ENST00000535689 PTDSS2Q9BVG9 487 aa3.87□□□□□ -1.79
SNHG1-202ENST00000535689 ALG8Q9BVK2 526 aa3.87□□□□□ -1.79
SNHG1-202ENST00000535689 STK31Q9BXU1 1019 aa3.87□□□□□ -1.79
SNHG1-202ENST00000535689 MAGEB5Q9BZ81 275 aa3.87□□□□□ -1.79
SNHG1-202ENST00000535689 MS4A7Q9GZW8 240 aaPredicted RBP3.87□□□□□ -1.79
SNHG1-202ENST00000535689 ATP6V0A4Q9HBG4 840 aa3.87□□□□□ -1.79
SNHG1-202ENST00000535689 CYP4F11Q9HBI6 524 aa3.87□□□□□ -1.79
SNHG1-202ENST00000535689 TMOD4Q9NZQ9 345 aa3.87□□□□□ -1.79
SNHG1-202ENST00000535689 HACL1Q9UJ83 578 aa3.87□□□□□ -1.79
SNHG1-202ENST00000535689 KIF24Q5T7B8 1368 aa3.87□□□□□ -1.79
SNHG1-202ENST00000535689 KDM6AO15550 1401 aaPredicted RBP3.87□□□□□ -1.79
SNHG1-202ENST00000535689 EDC4Q6P2E9 1401 aaKnown RBP3.87□□□□□ -1.79
SNHG1-202ENST00000535689 FER1L6Q2WGJ9 1857 aa3.86□□□□□ -1.79
SNHG1-202ENST00000535689 hCG_1642624A0A1W2PR95 340 aa3.86□□□□□ -1.79
SNHG1-202ENST00000535689 POM121BA6NF01 834 aa3.86□□□□□ -1.79
SNHG1-202ENST00000535689 TMEM191CA6NGB0 347 aa3.86□□□□□ -1.79
SNHG1-202ENST00000535689 TMEM200CA6NKL6 621 aa3.86□□□□□ -1.79
SNHG1-202ENST00000535689 A6NNZ2 444 aa3.86□□□□□ -1.79
SNHG1-202ENST00000535689 CLCA1A8K7I4 914 aa3.86□□□□□ -1.79
SNHG1-202ENST00000535689 LEFTY2O00292 366 aa3.86□□□□□ -1.79
SNHG1-202ENST00000535689 NPHP1O15259 732 aa3.86□□□□□ -1.79
SNHG1-202ENST00000535689 CCNT2O60583 730 aaKnown RBP3.86□□□□□ -1.79
SNHG1-202ENST00000535689 SNX2O60749 519 aa3.86□□□□□ -1.79
SNHG1-202ENST00000535689 RHOBTB3O94955 611 aa3.86□□□□□ -1.79
SNHG1-202ENST00000535689 NXPH3O95157 252 aa3.86□□□□□ -1.79
SNHG1-202ENST00000535689 KIF20AO95235 890 aa3.86□□□□□ -1.79
SNHG1-202ENST00000535689 DLDP09622 509 aaKnown RBP3.86□□□□□ -1.79
SNHG1-202ENST00000535689 TXNP10599 105 aaKnown RBP3.86□□□□□ -1.79
SNHG1-202ENST00000535689 FCER1AP12319 257 aa3.86□□□□□ -1.79
SNHG1-202ENST00000535689 ZNF20P17024 532 aa3.86□□□□□ -1.79
SNHG1-202ENST00000535689 SLC6A2P23975 617 aa3.86□□□□□ -1.79
SNHG1-202ENST00000535689 CD6P30203 668 aa3.86□□□□□ -1.79
SNHG1-202ENST00000535689 NPTX2P47972 431 aa3.86□□□□□ -1.79
SNHG1-202ENST00000535689 NDUFV1P49821 464 aa3.86□□□□□ -1.79
SNHG1-202ENST00000535689 CASP5P51878 434 aa3.86□□□□□ -1.79
SNHG1-202ENST00000535689 NEK3P51956 506 aa3.86□□□□□ -1.79
SNHG1-202ENST00000535689 VAV2P52735 878 aa3.86□□□□□ -1.79
SNHG1-202ENST00000535689 PRKAG1P54619 331 aa3.86□□□□□ -1.79
SNHG1-202ENST00000535689 UCP3P55916 312 aa3.86□□□□□ -1.79
SNHG1-202ENST00000535689 RESTQ13127 1097 aa3.86□□□□□ -1.79
SNHG1-202ENST00000535689 TOB2Q14106 344 aaPredicted RBP3.86□□□□□ -1.79
SNHG1-202ENST00000535689 ARL13BQ3SXY8 428 aa3.86□□□□□ -1.79
SNHG1-202ENST00000535689 PDCD4Q53EL6 469 aaKnown RBP3.86□□□□□ -1.79
SNHG1-202ENST00000535689 FBXO38Q6PIJ6 1188 aa3.86□□□□□ -1.79
SNHG1-202ENST00000535689 MTHFD1LQ6UB35 978 aa3.86□□□□□ -1.79
SNHG1-202ENST00000535689 LRRC55Q6ZSA7 311 aa3.86□□□□□ -1.79
SNHG1-202ENST00000535689 PPP1R32Q7Z5V6 425 aa3.86□□□□□ -1.79
SNHG1-202ENST00000535689 MORC1Q86VD1 984 aa3.86□□□□□ -1.79
SNHG1-202ENST00000535689 C2CD5Q86YS7 1000 aa3.86□□□□□ -1.79
SNHG1-202ENST00000535689 ARHGEF19Q8IW93 802 aa3.86□□□□□ -1.79
SNHG1-202ENST00000535689 SYTL1Q8IYJ3 562 aa3.86□□□□□ -1.79
SNHG1-202ENST00000535689 TXLNBQ8N3L3 684 aa3.86□□□□□ -1.79
SNHG1-202ENST00000535689 OR2C3Q8N628 320 aa3.86□□□□□ -1.79
SNHG1-202ENST00000535689 PSD4Q8NDX1 1056 aa3.86□□□□□ -1.79
SNHG1-202ENST00000535689 SUPT20HQ8NEM7 779 aa3.86□□□□□ -1.79
SNHG1-202ENST00000535689 ZNF622Q969S3 477 aaKnown RBP eCLIP3.86□□□□□ -1.79
SNHG1-202ENST00000535689 ZNF566Q969W8 418 aa3.86□□□□□ -1.79
SNHG1-202ENST00000535689 CAPNS2Q96L46 248 aa3.86□□□□□ -1.79
SNHG1-202ENST00000535689 P2RX7Q99572 595 aaKnown RBP3.86□□□□□ -1.79
SNHG1-202ENST00000535689 NAA15Q9BXJ9 866 aaKnown RBP3.86□□□□□ -1.79
SNHG1-202ENST00000535689 TAF1DQ9H5J8 278 aaPredicted RBP3.86□□□□□ -1.79
SNHG1-202ENST00000535689 CERS4Q9HA82 394 aa3.86□□□□□ -1.79
SNHG1-202ENST00000535689 PLCB1Q9NQ66 1216 aa3.86□□□□□ -1.79
SNHG1-202ENST00000535689 HEYLQ9NQ87 328 aaPredicted RBP3.86□□□□□ -1.79
SNHG1-202ENST00000535689 CPNE7Q9UBL6 633 aa3.86□□□□□ -1.79
SNHG1-202ENST00000535689 ASAP1Q9ULH1 1129 aa3.86□□□□□ -1.79
SNHG1-202ENST00000535689 MAGED2Q9UNF1 606 aaPredicted RBP3.86□□□□□ -1.79
SNHG1-202ENST00000535689 CORO2BQ9UQ03 480 aa3.86□□□□□ -1.79
SNHG1-202ENST00000535689 MYRFQ9Y2G1 1151 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms