RNA–Protein interactions for RNA: ENST00000535493.5

HDAC4-214, Transcript of histone deacetylase 4, humanhuman

TSL 2

Gene HDAC4, Length 2,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-214ENST00000535493 CD1EP15812 388 aa13.94□□□□□ -0.18
HDAC4-214ENST00000535493 TBXAS1P24557 533 aaPredicted RBP13.94□□□□□ -0.18
HDAC4-214ENST00000535493 RXRBP28702 533 aa13.94□□□□□ -0.18
HDAC4-214ENST00000535493 ZNF132P52740 706 aa13.94□□□□□ -0.18
HDAC4-214ENST00000535493 CRADDP78560 199 aa13.94□□□□□ -0.18
HDAC4-214ENST00000535493 FSTL1Q12841 308 aa13.94□□□□□ -0.18
HDAC4-214ENST00000535493 SFT2D3Q587I9 215 aa13.94□□□□□ -0.18
HDAC4-214ENST00000535493 TCHHL1Q5QJ38 904 aaPredicted RBP13.94□□□□□ -0.18
HDAC4-214ENST00000535493 VWA5B1Q5TIE3 1220 aa13.94□□□□□ -0.18
HDAC4-214ENST00000535493 RASSF3Q86WH2 238 aa13.94□□□□□ -0.18
HDAC4-214ENST00000535493 ATG4CQ96DT6 458 aa13.94□□□□□ -0.18
HDAC4-214ENST00000535493 PIWIL1Q96J94 861 aaKnown RBP13.94□□□□□ -0.18
HDAC4-214ENST00000535493 PGLYRP2Q96PD5 576 aa13.94□□□□□ -0.18
HDAC4-214ENST00000535493 PEBP4Q96S96 227 aa13.94□□□□□ -0.18
HDAC4-214ENST00000535493 GORASP1Q9BQQ3 440 aa13.94□□□□□ -0.18
HDAC4-214ENST00000535493 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.94□□□□□ -0.189e-8■■■■□ 23.7
HDAC4-214ENST00000535493 ZC3H7BQ9UGR2 993 aaKnown RBP13.94□□□□□ -0.18
HDAC4-214ENST00000535493 KCNN4O15554 427 aa13.93□□□□□ -0.18
HDAC4-214ENST00000535493 RFPL1O75677 317 aa13.93□□□□□ -0.18
HDAC4-214ENST00000535493 PYGLP06737 847 aa13.93□□□□□ -0.18
HDAC4-214ENST00000535493 KCNA2P16389 499 aa13.93□□□□□ -0.18
HDAC4-214ENST00000535493 KCNA4P22459 653 aa13.93□□□□□ -0.18
HDAC4-214ENST00000535493 CCNFP41002 786 aa13.93□□□□□ -0.18
HDAC4-214ENST00000535493 CDH6P55285 790 aa13.93□□□□□ -0.18
HDAC4-214ENST00000535493 ACTR3P61158 418 aa13.93□□□□□ -0.18
HDAC4-214ENST00000535493 ZRSR2Q15696 482 aaKnown RBP13.93□□□□□ -0.18
HDAC4-214ENST00000535493 CEP120Q8N960 986 aa13.93□□□□□ -0.18
HDAC4-214ENST00000535493 CGRRF1Q99675 332 aa13.93□□□□□ -0.18
HDAC4-214ENST00000535493 MAGEB5Q9BZ81 275 aa13.93□□□□□ -0.18
HDAC4-214ENST00000535493 JPH1Q9HDC5 661 aaPredicted RBP13.93□□□□□ -0.18
HDAC4-214ENST00000535493 HMGXB4Q9UGU5 601 aa13.93□□□□□ -0.18
HDAC4-214ENST00000535493 LRRC37AA6NMS7 1700 aa13.93□□□□□ -0.18
HDAC4-214ENST00000535493 ASS1P00966 412 aaKnown RBP13.93□□□□□ -0.18
HDAC4-214ENST00000535493 ERBB2P04626 1255 aa13.93□□□□□ -0.18
HDAC4-214ENST00000535493 RAP1GDS1P52306 607 aa13.93□□□□□ -0.18
HDAC4-214ENST00000535493 ATG14Q6ZNE5 492 aa13.93□□□□□ -0.18
HDAC4-214ENST00000535493 SLC26A11Q86WA9 606 aa13.93□□□□□ -0.18
HDAC4-214ENST00000535493 MYLK4Q86YV6 388 aaPredicted RBP13.93□□□□□ -0.18
HDAC4-214ENST00000535493 THNSL1Q8IYQ7 743 aa13.93□□□□□ -0.18
HDAC4-214ENST00000535493 MMADHCQ9H3L0 296 aaPredicted RBP13.93□□□□□ -0.18
HDAC4-214ENST00000535493 ACSS2Q9NR19 701 aa13.93□□□□□ -0.18
HDAC4-214ENST00000535493 IRAK4Q9NWZ3 460 aa13.93□□□□□ -0.18
HDAC4-214ENST00000535493 ANGPTL2Q9UKU9 493 aa13.93□□□□□ -0.18
HDAC4-214ENST00000535493 TTLL3Q9Y4R7 772 aa13.93□□□□□ -0.18
HDAC4-214ENST00000535493 MYO18AQ92614 2054 aaKnown RBP13.93□□□□□ -0.18
HDAC4-214ENST00000535493 A0A088AWK7 358 aa13.92□□□□□ -0.18
HDAC4-214ENST00000535493 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.92□□□□□ -0.18
HDAC4-214ENST00000535493 HMX2A2RU54 273 aa13.92□□□□□ -0.18
HDAC4-214ENST00000535493 PGM3O95394 542 aa13.92□□□□□ -0.18
HDAC4-214ENST00000535493 SRGAP2CP0DJJ0 459 aa13.92□□□□□ -0.18
HDAC4-214ENST00000535493 GRIA2P42262 883 aa13.92□□□□□ -0.18
HDAC4-214ENST00000535493 AQP4P55087 323 aa13.92□□□□□ -0.18
HDAC4-214ENST00000535493 RPL10AP62906 217 aaKnown RBP13.92□□□□□ -0.18
HDAC4-214ENST00000535493 AP2B1P63010 937 aa13.92□□□□□ -0.18
HDAC4-214ENST00000535493 YWHAZP63104 245 aaKnown RBP13.92□□□□□ -0.18
HDAC4-214ENST00000535493 ROR1Q01973 937 aa13.92□□□□□ -0.18
HDAC4-214ENST00000535493 ASPHQ12797 758 aa13.92□□□□□ -0.18
HDAC4-214ENST00000535493 DLG1Q12959 904 aa13.92□□□□□ -0.18
HDAC4-214ENST00000535493 SCYL2Q6P3W7 929 aa13.92□□□□□ -0.18
HDAC4-214ENST00000535493 VSIG10LQ86VR7 867 aa13.92□□□□□ -0.18
HDAC4-214ENST00000535493 ARHGAP24Q8N264 748 aa13.92□□□□□ -0.18
HDAC4-214ENST00000535493 PPP1R14CQ8TAE6 165 aa13.92□□□□□ -0.18
HDAC4-214ENST00000535493 UBA3Q8TBC4 463 aa13.92□□□□□ -0.18
HDAC4-214ENST00000535493 GJD4Q96KN9 370 aaPredicted RBP13.92□□□□□ -0.18
HDAC4-214ENST00000535493 CCDC106Q9BWC9 280 aa13.92□□□□□ -0.18
HDAC4-214ENST00000535493 PPCSQ9HAB8 311 aa13.92□□□□□ -0.18
HDAC4-214ENST00000535493 RNF146Q9NTX7 359 aa13.92□□□□□ -0.18
HDAC4-214ENST00000535493 TAGLN3Q9UI15 199 aa13.92□□□□□ -0.18
HDAC4-214ENST00000535493 ADAMTS6Q9UKP5 1117 aa13.92□□□□□ -0.18
HDAC4-214ENST00000535493 USP18Q9UMW8 372 aa13.92□□□□□ -0.18
HDAC4-214ENST00000535493 CNTN6Q9UQ52 1028 aa13.92□□□□□ -0.18
HDAC4-214ENST00000535493 ANKRD31Q8N7Z5 1873 aa13.92□□□□□ -0.18
HDAC4-214ENST00000535493 A8MXQ7 604 aa13.92□□□□□ -0.18
HDAC4-214ENST00000535493 PROCP04070 461 aa13.92□□□□□ -0.18
HDAC4-214ENST00000535493 PSAPP07602 524 aa13.92□□□□□ -0.18
HDAC4-214ENST00000535493 GSTA2P09210 222 aa13.92□□□□□ -0.18
HDAC4-214ENST00000535493 PEX2P28328 305 aa13.92□□□□□ -0.18
HDAC4-214ENST00000535493 RBL1P28749 1068 aa13.92□□□□□ -0.18
HDAC4-214ENST00000535493 TTC39BQ5VTQ0 682 aaPredicted RBP13.92□□□□□ -0.18
HDAC4-214ENST00000535493 AGR3Q8TD06 166 aa13.92□□□□□ -0.18
HDAC4-214ENST00000535493 MOCOSQ96EN8 888 aa13.92□□□□□ -0.18
HDAC4-214ENST00000535493 C17orf75Q9HAS0 396 aa13.92□□□□□ -0.18
HDAC4-214ENST00000535493 KCNK4Q9NYG8 393 aa13.92□□□□□ -0.18
HDAC4-214ENST00000535493 G3BP2Q9UN86 482 aaKnown RBP13.92□□□□□ -0.18
HDAC4-214ENST00000535493 UBR3Q6ZT12 1888 aa13.92□□□□□ -0.18
HDAC4-214ENST00000535493 MAGEC1O60732 1142 aa13.92□□□□□ -0.18
HDAC4-214ENST00000535493 C1QAP02745 245 aa13.92□□□□□ -0.18
HDAC4-214ENST00000535493 SNRPAP09012 282 aaKnown RBP13.92□□□□□ -0.18
HDAC4-214ENST00000535493 ADORA2AP29274 412 aa13.92□□□□□ -0.18
HDAC4-214ENST00000535493 MSX2P35548 267 aaPredicted RBP13.92□□□□□ -0.18
HDAC4-214ENST00000535493 TGFB2P61812 414 aa13.92□□□□□ -0.18
HDAC4-214ENST00000535493 TRPC3Q13507 836 aa13.92□□□□□ -0.18
HDAC4-214ENST00000535493 HADHQ16836 314 aaKnown RBP13.92□□□□□ -0.18
HDAC4-214ENST00000535493 ZC3H12AQ5D1E8 599 aaKnown RBP13.92□□□□□ -0.18
HDAC4-214ENST00000535493 NET1Q7Z628 596 aaPredicted RBP13.92□□□□□ -0.18
HDAC4-214ENST00000535493 CRLF3Q8IUI8 442 aa13.92□□□□□ -0.18
HDAC4-214ENST00000535493 NMD3Q96D46 503 aaKnown RBP13.92□□□□□ -0.18
HDAC4-214ENST00000535493 ZNF778Q96MU6 729 aa13.92□□□□□ -0.18
HDAC4-214ENST00000535493 TWNKQ96RR1 684 aa13.92□□□□□ -0.18
HDAC4-214ENST00000535493 SPATA16Q9BXB7 569 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms