RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 RMND1Q9NWS8 449 aa14□□□□□ -0.17
CLSTN3-205ENST00000535452 GMIPQ9P107 970 aa14□□□□□ -0.17
CLSTN3-205ENST00000535452 ANGPTL2Q9UKU9 493 aa14□□□□□ -0.17
CLSTN3-205ENST00000535452 PCDHA5Q9Y5H7 936 aa14□□□□□ -0.17
CLSTN3-205ENST00000535452 KIF26AQ9ULI4 1882 aaPredicted RBP13.99□□□□□ -0.17
CLSTN3-205ENST00000535452 DMDP11532 3685 aa13.99□□□□□ -0.17
CLSTN3-205ENST00000535452 GPR179Q6PRD1 2367 aa13.99□□□□□ -0.17
CLSTN3-205ENST00000535452 TCRBV21S2A2A0A5A6 115 aa13.99□□□□□ -0.17
CLSTN3-205ENST00000535452 BCLAF3A2AJT9 711 aaKnown RBP13.99□□□□□ -0.17
CLSTN3-205ENST00000535452 SCAMP3O14828 347 aaKnown RBP13.99□□□□□ -0.17
CLSTN3-205ENST00000535452 MAPK13O15264 365 aa13.99□□□□□ -0.17
CLSTN3-205ENST00000535452 AP5Z1O43299 807 aa13.99□□□□□ -0.17
CLSTN3-205ENST00000535452 C4BPAP04003 597 aaKnown RBP13.99□□□□□ -0.17
CLSTN3-205ENST00000535452 EPB41P11171 864 aaKnown RBP13.99□□□□□ -0.17
CLSTN3-205ENST00000535452 CCDC130P13994 396 aa13.99□□□□□ -0.17
CLSTN3-205ENST00000535452 CLDN10P78369 228 aa13.99□□□□□ -0.17
CLSTN3-205ENST00000535452 ZACNQ401N2 412 aa13.99□□□□□ -0.17
CLSTN3-205ENST00000535452 SNX30Q5VWJ9 437 aa13.99□□□□□ -0.17
CLSTN3-205ENST00000535452 SCARA3Q6AZY7 606 aa13.99□□□□□ -0.17
CLSTN3-205ENST00000535452 SLC36A4Q6YBV0 504 aa13.99□□□□□ -0.17
CLSTN3-205ENST00000535452 SV2AQ7L0J3 742 aa13.99□□□□□ -0.17
CLSTN3-205ENST00000535452 FAM186BQ8IYM0 893 aa13.99□□□□□ -0.17
CLSTN3-205ENST00000535452 CHPFQ8IZ52 775 aa13.99□□□□□ -0.17
CLSTN3-205ENST00000535452 ARHGAP18Q8N392 663 aa13.99□□□□□ -0.17
CLSTN3-205ENST00000535452 NAT16Q8N8M0 369 aa13.99□□□□□ -0.17
CLSTN3-205ENST00000535452 HMGB4Q8WW32 186 aa13.99□□□□□ -0.17
CLSTN3-205ENST00000535452 PIGKQ92643 395 aa13.99□□□□□ -0.17
CLSTN3-205ENST00000535452 CYFIP2Q96F07 1278 aa13.99□□□□□ -0.17
CLSTN3-205ENST00000535452 CNTNAP3BQ96NU0 1288 aa13.99□□□□□ -0.17
CLSTN3-205ENST00000535452 BBS2Q9BXC9 721 aa13.99□□□□□ -0.17
CLSTN3-205ENST00000535452 CNTNAP3Q9BZ76 1288 aa13.99□□□□□ -0.17
CLSTN3-205ENST00000535452 SLC32A1Q9H598 525 aa13.99□□□□□ -0.17
CLSTN3-205ENST00000535452 TMEM9BQ9NQ34 198 aa13.99□□□□□ -0.17
CLSTN3-205ENST00000535452 SPHK2Q9NRA0 654 aa13.99□□□□□ -0.17
CLSTN3-205ENST00000535452 STRIP2Q9ULQ0 834 aa13.99□□□□□ -0.17
CLSTN3-205ENST00000535452 INVSQ9Y283 1065 aa13.99□□□□□ -0.17
CLSTN3-205ENST00000535452 ZNF510Q9Y2H8 683 aa13.99□□□□□ -0.17
CLSTN3-205ENST00000535452 DENND4CQ5VZ89 1909 aa13.99□□□□□ -0.17
CLSTN3-205ENST00000535452 OBSL1O75147 1896 aa13.98□□□□□ -0.17
CLSTN3-205ENST00000535452 K7EQS6 105 aa13.98□□□□□ -0.17
CLSTN3-205ENST00000535452 DCLK1O15075 740 aa13.98□□□□□ -0.17
CLSTN3-205ENST00000535452 ACTN4O43707 911 aaKnown RBP13.98□□□□□ -0.17
CLSTN3-205ENST00000535452 ASS1P00966 412 aaKnown RBP13.98□□□□□ -0.17
CLSTN3-205ENST00000535452 HLA-DRAP01903 254 aa13.98□□□□□ -0.17
CLSTN3-205ENST00000535452 CYBBP04839 570 aa13.98□□□□□ -0.17
CLSTN3-205ENST00000535452 CD58P19256 250 aa13.98□□□□□ -0.17
CLSTN3-205ENST00000535452 ACO1P21399 889 aaKnown RBP13.98□□□□□ -0.17
CLSTN3-205ENST00000535452 PLA2G4AP47712 749 aa13.98□□□□□ -0.17
CLSTN3-205ENST00000535452 YWHAEP62258 255 aaKnown RBP13.98□□□□□ -0.17
CLSTN3-205ENST00000535452 ARID5AQ03989 594 aa13.98□□□□□ -0.17
CLSTN3-205ENST00000535452 ADAM9Q13443 819 aa13.98□□□□□ -0.17
CLSTN3-205ENST00000535452 STARD3Q14849 445 aa13.98□□□□□ -0.17
CLSTN3-205ENST00000535452 SPDYCQ5MJ68 293 aa13.98□□□□□ -0.17
CLSTN3-205ENST00000535452 PLA2G2CQ5R387 149 aa13.98□□□□□ -0.17
CLSTN3-205ENST00000535452 PMS2CLQ68D20 193 aa13.98□□□□□ -0.17
CLSTN3-205ENST00000535452 NAIF1Q69YI7 327 aaPredicted RBP13.98□□□□□ -0.17
CLSTN3-205ENST00000535452 RHBDF2Q6PJF5 856 aa13.98□□□□□ -0.17
CLSTN3-205ENST00000535452 RSRC2Q7L4I2 434 aaKnown RBP13.98□□□□□ -0.17
CLSTN3-205ENST00000535452 RASSF3Q86WH2 238 aa13.98□□□□□ -0.17
CLSTN3-205ENST00000535452 FUKQ8N0W3 1084 aa13.98□□□□□ -0.17
CLSTN3-205ENST00000535452 CRYBG2Q8N1P7 616 aa13.98□□□□□ -0.17
CLSTN3-205ENST00000535452 KIAA0895Q8NCT3 520 aa13.98□□□□□ -0.17
CLSTN3-205ENST00000535452 MDGA1Q8NFP4 955 aa13.98□□□□□ -0.17
CLSTN3-205ENST00000535452 SCAMP5Q8TAC9 235 aa13.98□□□□□ -0.17
CLSTN3-205ENST00000535452 TMEM174Q8WUU8 243 aa13.98□□□□□ -0.17
CLSTN3-205ENST00000535452 UCMAQ8WVF2 138 aa13.98□□□□□ -0.17
CLSTN3-205ENST00000535452 GTPBP4Q9BZE4 634 aaKnown RBP13.98□□□□□ -0.17
CLSTN3-205ENST00000535452 NIF3L1Q9GZT8 377 aa13.98□□□□□ -0.17
CLSTN3-205ENST00000535452 CCSER2Q9H7U1 834 aa13.98□□□□□ -0.17
CLSTN3-205ENST00000535452 PNPLA8Q9NP80 782 aa13.98□□□□□ -0.17
CLSTN3-205ENST00000535452 DNAJC17Q9NVM6 304 aaKnown RBP13.98□□□□□ -0.17
CLSTN3-205ENST00000535452 DNMT3LQ9UJW3 386 aa13.98□□□□□ -0.17
CLSTN3-205ENST00000535452 NAGPAQ9UK23 515 aa13.98□□□□□ -0.17
CLSTN3-205ENST00000535452 RALGAPA1Q6GYQ0 2036 aa13.98□□□□□ -0.17
CLSTN3-205ENST00000535452 NEDD8-MDP1E9PL57 170 aa13.97□□□□□ -0.17
CLSTN3-205ENST00000535452 CETN3O15182 167 aa13.97□□□□□ -0.17
CLSTN3-205ENST00000535452 HOXC11O43248 304 aaPredicted RBP13.97□□□□□ -0.17
CLSTN3-205ENST00000535452 NDUFS2O75306 463 aa13.97□□□□□ -0.17
CLSTN3-205ENST00000535452 ZNF217O75362 1048 aa13.97□□□□□ -0.17
CLSTN3-205ENST00000535452 HOXB2P14652 356 aa13.97□□□□□ -0.17
CLSTN3-205ENST00000535452 CHKAP35790 457 aa13.97□□□□□ -0.17
CLSTN3-205ENST00000535452 SLC6A11P48066 632 aa13.97□□□□□ -0.17
CLSTN3-205ENST00000535452 NOVA1P51513 510 aaKnown RBP13.97□□□□□ -0.17
CLSTN3-205ENST00000535452 CACNA2D1P54289 1103 aa13.97□□□□□ -0.17
CLSTN3-205ENST00000535452 ENPEPQ07075 957 aa13.97□□□□□ -0.17
CLSTN3-205ENST00000535452 ST3GAL2Q16842 350 aa13.97□□□□□ -0.17
CLSTN3-205ENST00000535452 UAP1L1Q3KQV9 507 aa13.97□□□□□ -0.17
CLSTN3-205ENST00000535452 C10orf120Q5SQS8 335 aa13.97□□□□□ -0.17
CLSTN3-205ENST00000535452 LYSMD4Q5XG99 296 aa13.97□□□□□ -0.17
CLSTN3-205ENST00000535452 KRT39Q6A163 491 aa13.97□□□□□ -0.17
CLSTN3-205ENST00000535452 BBS7Q8IWZ6 715 aa13.97□□□□□ -0.17
CLSTN3-205ENST00000535452 HDDC3Q8N4P3 179 aa13.97□□□□□ -0.17
CLSTN3-205ENST00000535452 CEP76Q8TAP6 659 aa13.97□□□□□ -0.17
CLSTN3-205ENST00000535452 HEXIM2Q96MH2 286 aaKnown RBP13.97□□□□□ -0.17
CLSTN3-205ENST00000535452 HNRNPABQ99729 332 aaKnown RBP13.97□□□□□ -0.17
CLSTN3-205ENST00000535452 DUSP9Q99956 384 aaKnown RBP13.97□□□□□ -0.17
CLSTN3-205ENST00000535452 DCLK3Q9C098 648 aa13.97□□□□□ -0.17
CLSTN3-205ENST00000535452 DMAC2Q9NW81 257 aa13.97□□□□□ -0.17
CLSTN3-205ENST00000535452 SCML2Q9UQR0 700 aa13.97□□□□□ -0.17
CLSTN3-205ENST00000535452 TRAF3IP3Q9Y228 551 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms