RNA–Protein interactions for RNA: ENST00000534553.5

BEST1-208, Transcript of bestrophin 1, humanhuman

TSL 2 BASIC

Gene BEST1, Length 1,829 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-208ENST00000534553 SMARCD1Q96GM5 515 aa13.99□□□□□ -0.17
BEST1-208ENST00000534553 RNF157Q96PX1 679 aa13.99□□□□□ -0.17
BEST1-208ENST00000534553 TRIM62Q9BVG3 475 aa13.99□□□□□ -0.17
BEST1-208ENST00000534553 B3GNT5Q9BYG0 378 aa13.99□□□□□ -0.17
BEST1-208ENST00000534553 RCOR3Q9P2K3 495 aaPredicted RBP13.99□□□□□ -0.17
BEST1-208ENST00000534553 KANSL3Q9P2N6 904 aa13.99□□□□□ -0.17
BEST1-208ENST00000534553 TPX2Q9ULW0 747 aaKnown RBP13.99□□□□□ -0.17
BEST1-208ENST00000534553 CASTOR2A6NHX0 329 aa13.98□□□□□ -0.17
BEST1-208ENST00000534553 KBTBD13C9JR72 458 aa13.98□□□□□ -0.17
BEST1-208ENST00000534553 HCRTO43612 131 aa13.98□□□□□ -0.17
BEST1-208ENST00000534553 ZNF189O75820 626 aaPredicted RBP13.98□□□□□ -0.17
BEST1-208ENST00000534553 GABBR2O75899 941 aa13.98□□□□□ -0.17
BEST1-208ENST00000534553 B3GAT3O94766 335 aa13.98□□□□□ -0.17
BEST1-208ENST00000534553 TYMPP19971 482 aa13.98□□□□□ -0.17
BEST1-208ENST00000534553 NOS2P35228 1153 aa13.98□□□□□ -0.17
BEST1-208ENST00000534553 GYS2P54840 703 aa13.98□□□□□ -0.17
BEST1-208ENST00000534553 HDAC4P56524 1084 aa13.98□□□□□ -0.17
BEST1-208ENST00000534553 YWHAZP63104 245 aaKnown RBP13.98□□□□□ -0.17
BEST1-208ENST00000534553 SLC29A2Q14542 456 aa13.98□□□□□ -0.17
BEST1-208ENST00000534553 P3H1Q32P28 736 aa13.98□□□□□ -0.17
BEST1-208ENST00000534553 C6orf118Q5T5N4 469 aa13.98□□□□□ -0.17
BEST1-208ENST00000534553 SCYL2Q6P3W7 929 aa13.98□□□□□ -0.17
BEST1-208ENST00000534553 ZNF771Q7L3S4 317 aaPredicted RBP13.98□□□□□ -0.17
BEST1-208ENST00000534553 FAM35AQ86V20 835 aa13.98□□□□□ -0.17
BEST1-208ENST00000534553 THEM5Q8N1Q8 247 aa13.98□□□□□ -0.17
BEST1-208ENST00000534553 ZNF784Q8NCA9 323 aaPredicted RBP13.98□□□□□ -0.17
BEST1-208ENST00000534553 RNF169Q8NCN4 708 aa13.98□□□□□ -0.17
BEST1-208ENST00000534553 HAUS1Q96CS2 278 aa13.98□□□□□ -0.17
BEST1-208ENST00000534553 TTC25Q96NG3 672 aa13.98□□□□□ -0.17
BEST1-208ENST00000534553 EPB41L4BQ9H329 900 aa13.98□□□□□ -0.17
BEST1-208ENST00000534553 PNPLA8Q9NP80 782 aa13.98□□□□□ -0.17
BEST1-208ENST00000534553 CNGB3Q9NQW8 809 aa13.98□□□□□ -0.17
BEST1-208ENST00000534553 KRT82Q9NSB4 513 aa13.98□□□□□ -0.17
BEST1-208ENST00000534553 PHF24Q9UPV7 400 aa13.98□□□□□ -0.17
BEST1-208ENST00000534553 PCNTO95613 3336 aa13.97□□□□□ -0.17
BEST1-208ENST00000534553 ARVCFO00192 962 aa13.97□□□□□ -0.17
BEST1-208ENST00000534553 APOL1O14791 398 aa13.97□□□□□ -0.17
BEST1-208ENST00000534553 SHOX2O60902 331 aaPredicted RBP13.97□□□□□ -0.17
BEST1-208ENST00000534553 NR1D1P20393 614 aa13.97□□□□□ -0.17
BEST1-208ENST00000534553 EIF3EP60228 445 aaKnown RBP13.97□□□□□ -0.17
BEST1-208ENST00000534553 DYNLT1P63172 113 aa13.97□□□□□ -0.17
BEST1-208ENST00000534553 ADIGQ0VDE8 80 aa13.97□□□□□ -0.17
BEST1-208ENST00000534553 NOMO1Q15155 1222 aa13.97□□□□□ -0.17
BEST1-208ENST00000534553 TAF5Q15542 800 aa13.97□□□□□ -0.17
BEST1-208ENST00000534553 TRIP13Q15645 432 aaPredicted RBP13.97□□□□□ -0.17
BEST1-208ENST00000534553 C4orf22Q6V702 233 aa13.97□□□□□ -0.17
BEST1-208ENST00000534553 LEKR1Q6ZMV7 388 aa13.97□□□□□ -0.17
BEST1-208ENST00000534553 PAQR9Q6ZVX9 377 aa13.97□□□□□ -0.17
BEST1-208ENST00000534553 CCDC25Q86WR0 208 aa13.97□□□□□ -0.17
BEST1-208ENST00000534553 SCML4Q8N228 414 aa13.97□□□□□ -0.17
BEST1-208ENST00000534553 URGCPQ8TCY9 931 aa13.97□□□□□ -0.17
BEST1-208ENST00000534553 RSPH1Q8WYR4 309 aa13.97□□□□□ -0.17
BEST1-208ENST00000534553 NT5C3BQ969T7 300 aa13.97□□□□□ -0.17
BEST1-208ENST00000534553 SLC9A7Q96T83 725 aa13.97□□□□□ -0.17
BEST1-208ENST00000534553 SNRNP25Q9BV90 132 aaKnown RBP13.97□□□□□ -0.17
BEST1-208ENST00000534553 CDC42EP4Q9H3Q1 356 aaKnown RBP13.97□□□□□ -0.17
BEST1-208ENST00000534553 SEMA4AQ9H3S1 761 aa13.97□□□□□ -0.17
BEST1-208ENST00000534553 POPDC2Q9HBU9 364 aa13.97□□□□□ -0.17
BEST1-208ENST00000534553 PCDH18Q9HCL0 1135 aa13.97□□□□□ -0.17
BEST1-208ENST00000534553 CRTAC1Q9NQ79 661 aa13.97□□□□□ -0.17
BEST1-208ENST00000534553 C9IYK1 514 aa13.97□□□□□ -0.17
BEST1-208ENST00000534553 TMEM189-UBE2V1I3L0A0 370 aa13.97□□□□□ -0.17
BEST1-208ENST00000534553 TTC4O95801 387 aa13.97□□□□□ -0.17
BEST1-208ENST00000534553 IVLP07476 585 aa13.97□□□□□ -0.17
BEST1-208ENST00000534553 CD48P09326 243 aa13.97□□□□□ -0.17
BEST1-208ENST00000534553 RBP3P10745 1247 aa13.97□□□□□ -0.17
BEST1-208ENST00000534553 CAPN2P17655 700 aa13.97□□□□□ -0.17
BEST1-208ENST00000534553 ACAT1P24752 427 aaKnown RBP13.97□□□□□ -0.17
BEST1-208ENST00000534553 ACTN2P35609 894 aa13.97□□□□□ -0.17
BEST1-208ENST00000534553 NR2C2P49116 596 aa13.97□□□□□ -0.17
BEST1-208ENST00000534553 ROR1Q01973 937 aa13.97□□□□□ -0.17
BEST1-208ENST00000534553 ADCY1Q08828 1119 aa13.97□□□□□ -0.17
BEST1-208ENST00000534553 GPS1Q13098 491 aa13.97□□□□□ -0.17
BEST1-208ENST00000534553 BFSP2Q13515 415 aa13.97□□□□□ -0.17
BEST1-208ENST00000534553 TIGD5Q53EQ6 642 aa13.97□□□□□ -0.17
BEST1-208ENST00000534553 SH3PXD2AQ5TCZ1 1133 aa13.97□□□□□ -0.17
BEST1-208ENST00000534553 SLC9A4Q6AI14 798 aa13.97□□□□□ -0.17
BEST1-208ENST00000534553 BZW1Q7L1Q6 419 aaKnown RBP13.97□□□□□ -0.17
BEST1-208ENST00000534553 C3orf58Q8NDZ4 430 aa13.97□□□□□ -0.17
BEST1-208ENST00000534553 IRGQQ8WZA9 623 aa13.97□□□□□ -0.17
BEST1-208ENST00000534553 FAM149B1Q96BN6 582 aa13.97□□□□□ -0.17
BEST1-208ENST00000534553 PCED1BQ96HM7 432 aa13.97□□□□□ -0.17
BEST1-208ENST00000534553 SUSD3Q96L08 255 aa13.97□□□□□ -0.17
BEST1-208ENST00000534553 SLC2A13Q96QE2 648 aa13.97□□□□□ -0.17
BEST1-208ENST00000534553 FAM118BQ9BPY3 351 aa13.97□□□□□ -0.17
BEST1-208ENST00000534553 LPIN3Q9BQK8 851 aa13.97□□□□□ -0.17
BEST1-208ENST00000534553 TMEM121Q9BTD3 319 aa13.97□□□□□ -0.17
BEST1-208ENST00000534553 CSNK1G1Q9HCP0 422 aa13.97□□□□□ -0.17
BEST1-208ENST00000534553 PRDM10Q9NQV6 1147 aa13.97□□□□□ -0.17
BEST1-208ENST00000534553 TMEM51Q9NW97 253 aa13.97□□□□□ -0.17
BEST1-208ENST00000534553 ATP2C2O75185 946 aa13.96□□□□□ -0.17
BEST1-208ENST00000534553 AP1G2O75843 785 aa13.96□□□□□ -0.17
BEST1-208ENST00000534553 POMCP01189 267 aa13.96□□□□□ -0.17
BEST1-208ENST00000534553 ABHD2P08910 425 aa13.96□□□□□ -0.17
BEST1-208ENST00000534553 ATP5DP30049 168 aa13.96□□□□□ -0.17
BEST1-208ENST00000534553 VPS41P49754 854 aa13.96□□□□□ -0.17
BEST1-208ENST00000534553 AFF1P51825 1210 aaKnown RBP13.96□□□□□ -0.17
BEST1-208ENST00000534553 FAM189BP81408 668 aa13.96□□□□□ -0.17
BEST1-208ENST00000534553 TSPY1Q01534 308 aa13.96□□□□□ -0.17
BEST1-208ENST00000534553 ANKRD20A8PQ5CZ79 823 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms