RNA–Protein interactions for RNA: ENST00000533979.5

ATM-223, Transcript of ATM serine/threonine kinase, human

TSL 3

Gene ATM, Length 705 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATM-223	ENST00000533979	MTFMT	Q96DP5	389 aa	Known RBP	5.38	□□□□□ -1.55
ATM-223	ENST00000533979	MOGAT1	Q96PD6	335 aa		5.38	□□□□□ -1.55
ATM-223	ENST00000533979	TMEM120A	Q9BXJ8	343 aa		5.38	□□□□□ -1.55
ATM-223	ENST00000533979	LRRC27	Q9C0I9	530 aa		5.38	□□□□□ -1.55
ATM-223	ENST00000533979	UNC45A	Q9H3U1	944 aa		5.38	□□□□□ -1.55
ATM-223	ENST00000533979	HESX1	Q9UBX0	185 aa		5.38	□□□□□ -1.55
ATM-223	ENST00000533979	CRYL1	Q9Y2S2	319 aa		5.38	□□□□□ -1.55
ATM-223	ENST00000533979	SNX13	Q9Y5W8	968 aa		5.38	□□□□□ -1.55
ATM-223	ENST00000533979	AOX1	Q06278	1338 aa		5.38	□□□□□ -1.55
ATM-223	ENST00000533979	ITIH6	Q6UXX5	1313 aa		5.38	□□□□□ -1.55
ATM-223	ENST00000533979	ARHGEF17	Q96PE2	2063 aa	Predicted RBP	5.37	□□□□□ -1.55
ATM-223	ENST00000533979	MSANTD3-TMEFF1	A0A0A6YYJ0	341 aa		5.37	□□□□□ -1.55
ATM-223	ENST00000533979		M0QYG6	137 aa		5.37	□□□□□ -1.55
ATM-223	ENST00000533979	FGF18	O76093	207 aa		5.37	□□□□□ -1.55
ATM-223	ENST00000533979	URI1	O94763	535 aa	Predicted RBP	5.37	□□□□□ -1.55
ATM-223	ENST00000533979	CD4	P01730	458 aa		5.37	□□□□□ -1.55
ATM-223	ENST00000533979	ATXN1L	P0C7T5	689 aa	Known RBP	5.37	□□□□□ -1.55
ATM-223	ENST00000533979	DHRS4L1	P0CG22	281 aa		5.37	□□□□□ -1.55
ATM-223	ENST00000533979	PDIA3	P30101	505 aa	Known RBP	5.37	□□□□□ -1.55
ATM-223	ENST00000533979	HSPA2	P54652	639 aa		5.37	□□□□□ -1.55
ATM-223	ENST00000533979	SOX8	P57073	446 aa		5.37	□□□□□ -1.55
ATM-223	ENST00000533979	EXOSC9	Q06265	439 aa	Known RBP	5.37	□□□□□ -1.55
ATM-223	ENST00000533979	PMS2P11	Q13670	270 aa		5.37	□□□□□ -1.55
ATM-223	ENST00000533979	STARD3	Q14849	445 aa		5.37	□□□□□ -1.55
ATM-223	ENST00000533979	VPS53	Q5VIR6	699 aa		5.37	□□□□□ -1.55
ATM-223	ENST00000533979	KIAA1614	Q5VZ46	1190 aa		5.37	□□□□□ -1.55
ATM-223	ENST00000533979	HIBCH	Q6NVY1	386 aa	Predicted RBP	5.37	□□□□□ -1.55
ATM-223	ENST00000533979	TMEM108	Q6UXF1	575 aa		5.37	□□□□□ -1.55
ATM-223	ENST00000533979	PTF1A	Q7RTS3	328 aa		5.37	□□□□□ -1.55
ATM-223	ENST00000533979	ZNF551	Q7Z340	670 aa	Predicted RBP	5.37	□□□□□ -1.55
ATM-223	ENST00000533979	KRT77	Q7Z794	578 aa		5.37	□□□□□ -1.55
ATM-223	ENST00000533979	TBC1D1	Q86TI0	1168 aa	Predicted RBP	5.37	□□□□□ -1.55
ATM-223	ENST00000533979	SYTL1	Q8IYJ3	562 aa		5.37	□□□□□ -1.55
ATM-223	ENST00000533979	ZNF527	Q8NB42	609 aa		5.37	□□□□□ -1.55
ATM-223	ENST00000533979	ATRIP	Q8WXE1	791 aa		5.37	□□□□□ -1.55
ATM-223	ENST00000533979	BRI3BP	Q8WY22	251 aa		5.37	□□□□□ -1.55
ATM-223	ENST00000533979	ANKS1A	Q92625	1134 aa		5.37	□□□□□ -1.55
ATM-223	ENST00000533979	USP13	Q92995	863 aa	Predicted RBP	5.37	□□□□□ -1.55
ATM-223	ENST00000533979	PTDSS2	Q9BVG9	487 aa		5.37	□□□□□ -1.55
ATM-223	ENST00000533979	ATP6V0A4	Q9HBG4	840 aa		5.37	□□□□□ -1.55
ATM-223	ENST00000533979	SMC4	Q9NTJ3	1288 aa		5.37	□□□□□ -1.55
ATM-223	ENST00000533979	DKK3	Q9UBP4	350 aa		5.37	□□□□□ -1.55
ATM-223	ENST00000533979	MAGED2	Q9UNF1	606 aa	Predicted RBP	5.37	□□□□□ -1.55
ATM-223	ENST00000533979	FRMD4B	Q9Y2L6	1034 aa		5.37	□□□□□ -1.55
ATM-223	ENST00000533979	WNT6	Q9Y6F9	365 aa		5.37	□□□□□ -1.55
ATM-223	ENST00000533979	WIZ	O95785	1651 aa		5.37	□□□□□ -1.55
ATM-223	ENST00000533979	POM121B	A6NF01	834 aa		5.36	□□□□□ -1.55
ATM-223	ENST00000533979	PPM1D	O15297	605 aa		5.36	□□□□□ -1.55
ATM-223	ENST00000533979	SKAP2	O75563	359 aa	Predicted RBP	5.36	□□□□□ -1.55
ATM-223	ENST00000533979	ONECUT2	O95948	504 aa		5.36	□□□□□ -1.55
ATM-223	ENST00000533979	RHO	P08100	348 aa		5.36	□□□□□ -1.55
ATM-223	ENST00000533979	IFIT1	P09914	478 aa	Known RBP	5.36	□□□□□ -1.55
ATM-223	ENST00000533979	CHRM3	P20309	590 aa		5.36	□□□□□ -1.55
ATM-223	ENST00000533979	KCNJ5	P48544	419 aa		5.36	□□□□□ -1.55
ATM-223	ENST00000533979	RAB1A	P62820	205 aa		5.36	□□□□□ -1.55
ATM-223	ENST00000533979	NUCB1	Q02818	461 aa		5.36	□□□□□ -1.55
ATM-223	ENST00000533979	FOXF2	Q12947	444 aa		5.36	□□□□□ -1.55
ATM-223	ENST00000533979	TEDDM1	Q5T9Z0	273 aa		5.36	□□□□□ -1.55
ATM-223	ENST00000533979	FAAH2	Q6GMR7	532 aa		5.36	□□□□□ -1.55
ATM-223	ENST00000533979	LAYN	Q6UX15	382 aa		5.36	□□□□□ -1.55
ATM-223	ENST00000533979	RFX8	Q6ZV50	586 aa		5.36	□□□□□ -1.55
ATM-223	ENST00000533979	RASAL3	Q86YV0	1011 aa		5.36	□□□□□ -1.55
ATM-223	ENST00000533979	SRRM1	Q8IYB3	904 aa	Known RBP	5.36	□□□□□ -1.55
ATM-223	ENST00000533979	RNF152	Q8N8N0	203 aa		5.36	□□□□□ -1.55
ATM-223	ENST00000533979	PLBD2	Q8NHP8	589 aa		5.36	□□□□□ -1.55
ATM-223	ENST00000533979	LTV1	Q96GA3	475 aa	Predicted RBP	5.36	□□□□□ -1.55
ATM-223	ENST00000533979	PKNOX2	Q96KN3	472 aa		5.36	□□□□□ -1.55
ATM-223	ENST00000533979	SLC46A1	Q96NT5	459 aa		5.36	□□□□□ -1.55
ATM-223	ENST00000533979	SEC62	Q99442	399 aa	Known RBP	5.36	□□□□□ -1.55
ATM-223	ENST00000533979	ITM2C	Q9NQX7	267 aa		5.36	□□□□□ -1.55
ATM-223	ENST00000533979	ARHGEF3	Q9NR81	526 aa		5.36	□□□□□ -1.55
ATM-223	ENST00000533979	BLOC1S4	Q9NUP1	217 aa		5.36	□□□□□ -1.55
ATM-223	ENST00000533979	PIH1D1	Q9NWS0	290 aa	Known RBP	5.36	□□□□□ -1.55
ATM-223	ENST00000533979	GRHPR	Q9UBQ7	328 aa		5.36	□□□□□ -1.55
ATM-223	ENST00000533979	MED16	Q9Y2X0	877 aa		5.36	□□□□□ -1.55
ATM-223	ENST00000533979	TOP2B	Q02880	1626 aa		5.35	□□□□□ -1.55
ATM-223	ENST00000533979	AQR	O60306	1485 aa	Known RBP eCLIP	5.35	□□□□□ -1.55
ATM-223	ENST00000533979		K7ENM7	598 aa		5.35	□□□□□ -1.55
ATM-223	ENST00000533979	EIF3F	O00303	357 aa	Predicted RBP	5.35	□□□□□ -1.55
ATM-223	ENST00000533979	DCLK1	O15075	740 aa		5.35	□□□□□ -1.55
ATM-223	ENST00000533979	SLC16A3	O15427	465 aa	Known RBP	5.35	□□□□□ -1.55
ATM-223	ENST00000533979	FFAR2	O15552	330 aa		5.35	□□□□□ -1.55
ATM-223	ENST00000533979	BAIAP3	O94812	1187 aa		5.35	□□□□□ -1.55
ATM-223	ENST00000533979	NXPH3	O95157	252 aa		5.35	□□□□□ -1.55
ATM-223	ENST00000533979	CYP2C9	P11712	490 aa		5.35	□□□□□ -1.55
ATM-223	ENST00000533979	CDK4	P11802	303 aa		5.35	□□□□□ -1.55
ATM-223	ENST00000533979	PXN	P49023	591 aa	Predicted RBP	5.35	□□□□□ -1.55
ATM-223	ENST00000533979	CCT8	P50990	548 aa		5.35	□□□□□ -1.55
ATM-223	ENST00000533979	MPEG1	Q2M385	716 aa		5.35	□□□□□ -1.55
ATM-223	ENST00000533979	ZNF618	Q5T7W0	954 aa		5.35	□□□□□ -1.55
ATM-223	ENST00000533979	ZKSCAN2	Q63HK3	967 aa		5.35	□□□□□ -1.55
ATM-223	ENST00000533979	ANKRD16	Q6P6B7	361 aa		5.35	□□□□□ -1.55
ATM-223	ENST00000533979	WDR53	Q7Z5U6	358 aa	Predicted RBP	5.35	□□□□□ -1.55
ATM-223	ENST00000533979	LIX1L	Q8IVB5	337 aa		5.35	□□□□□ -1.55
ATM-223	ENST00000533979	HASPIN	Q8TF76	798 aa		5.35	□□□□□ -1.55
ATM-223	ENST00000533979	ZBTB10	Q96DT7	871 aa		5.35	□□□□□ -1.55
ATM-223	ENST00000533979	NT5C1B	Q96P26	610 aa		5.35	□□□□□ -1.55
ATM-223	ENST00000533979	COLEC11	Q9BWP8	271 aa		5.35	□□□□□ -1.55
ATM-223	ENST00000533979	SLC26A6	Q9BXS9	759 aa		5.35	□□□□□ -1.55
ATM-223	ENST00000533979	UNK	Q9C0B0	810 aa	Known RBP	5.35	□□□□□ -1.55

Retrieved 100 of 20,778 RNA–protein pairs in 116.1 ms