RNA–Protein interactions for RNA: ENST00000533909.5

CAPN1-227, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-227ENST00000533909 THAP12O43422 761 aa14.08□□□□□ -0.16
CAPN1-227ENST00000533909 GALR2O43603 387 aaPredicted RBP14.08□□□□□ -0.16
CAPN1-227ENST00000533909 NFATC1O95644 943 aa14.08□□□□□ -0.16
CAPN1-227ENST00000533909 ZBED1O96006 694 aa14.08□□□□□ -0.16
CAPN1-227ENST00000533909 ZDHHC11BP0C7U3 371 aa14.08□□□□□ -0.16
CAPN1-227ENST00000533909 RARGP13631 454 aa14.08□□□□□ -0.16
CAPN1-227ENST00000533909 GNA15P30679 374 aa14.08□□□□□ -0.16
CAPN1-227ENST00000533909 SOX9P48436 509 aa14.08□□□□□ -0.16
CAPN1-227ENST00000533909 ZNF132P52740 706 aa14.08□□□□□ -0.16
CAPN1-227ENST00000533909 PTPN5P54829 565 aa14.08□□□□□ -0.16
CAPN1-227ENST00000533909 RUNX3Q13761 415 aa14.08□□□□□ -0.16
CAPN1-227ENST00000533909 CNGA2Q16280 664 aa14.08□□□□□ -0.16
CAPN1-227ENST00000533909 KLHL40Q2TBA0 621 aa14.08□□□□□ -0.16
CAPN1-227ENST00000533909 ANO6Q4KMQ2 910 aa14.08□□□□□ -0.16
CAPN1-227ENST00000533909 MIIPQ5JXC2 388 aa14.08□□□□□ -0.16
CAPN1-227ENST00000533909 CDKAL1Q5VV42 579 aa14.08□□□□□ -0.16
CAPN1-227ENST00000533909 DTWD2Q8NBA8 298 aa14.08□□□□□ -0.16
CAPN1-227ENST00000533909 TFAP2BQ92481 460 aa14.08□□□□□ -0.16
CAPN1-227ENST00000533909 GOLGA1Q92805 767 aa14.08□□□□□ -0.16
CAPN1-227ENST00000533909 PCMTD1Q96MG8 357 aaPredicted RBP14.08□□□□□ -0.16
CAPN1-227ENST00000533909 FAM83CQ9BQN1 747 aa14.08□□□□□ -0.16
CAPN1-227ENST00000533909 DDX23Q9BUQ8 820 aaKnown RBP14.08□□□□□ -0.16
CAPN1-227ENST00000533909 OSBPL6Q9BZF3 934 aa14.08□□□□□ -0.16
CAPN1-227ENST00000533909 IRF2BPLQ9H1B7 796 aa14.08□□□□□ -0.16
CAPN1-227ENST00000533909 DNAJC12Q9UKB3 198 aa14.08□□□□□ -0.16
CAPN1-227ENST00000533909 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.08□□□□□ -0.16
CAPN1-227ENST00000533909 CACNA1HO95180 2353 aa14.07□□□□□ -0.16
CAPN1-227ENST00000533909 SMTNL1A8MU46 457 aa14.07□□□□□ -0.16
CAPN1-227ENST00000533909 RNF225M0QZC1 329 aaPredicted RBP14.07□□□□□ -0.16
CAPN1-227ENST00000533909 OLFM2O95897 454 aa14.07□□□□□ -0.16
CAPN1-227ENST00000533909 IRF1P10914 325 aa14.07□□□□□ -0.16
CAPN1-227ENST00000533909 LCP1P13796 627 aa14.07□□□□□ -0.16
CAPN1-227ENST00000533909 ARSAP15289 507 aa14.07□□□□□ -0.16
CAPN1-227ENST00000533909 TCF3P15923 654 aa14.07□□□□□ -0.16
CAPN1-227ENST00000533909 CTHP32929 405 aa14.07□□□□□ -0.16
CAPN1-227ENST00000533909 MAGEA9P43362 315 aa14.07□□□□□ -0.16
CAPN1-227ENST00000533909 PLA2G4AP47712 749 aa14.07□□□□□ -0.16
CAPN1-227ENST00000533909 APBA1Q02410 837 aa14.07□□□□□ -0.16
CAPN1-227ENST00000533909 ADIGQ0VDE8 80 aa14.07□□□□□ -0.16
CAPN1-227ENST00000533909 RAPGEF1Q13905 1077 aa14.07□□□□□ -0.16
CAPN1-227ENST00000533909 LRRC32Q14392 662 aa14.07□□□□□ -0.16
CAPN1-227ENST00000533909 KRT31Q15323 416 aa14.07□□□□□ -0.16
CAPN1-227ENST00000533909 CCDC105Q8IYK2 499 aa14.07□□□□□ -0.16
CAPN1-227ENST00000533909 AOPEPQ8N6M6 819 aa14.07□□□□□ -0.16
CAPN1-227ENST00000533909 SECISBP2LQ93073 1101 aaKnown RBP14.07□□□□□ -0.16
CAPN1-227ENST00000533909 LSM14BQ9BX40 385 aaKnown RBP14.07□□□□□ -0.16
CAPN1-227ENST00000533909 ULBP1Q9BZM6 244 aa14.07□□□□□ -0.16
CAPN1-227ENST00000533909 ST7Q9NRC1 585 aa14.07□□□□□ -0.16
CAPN1-227ENST00000533909 SPATA6Q9NWH7 488 aaPredicted RBP14.07□□□□□ -0.16
CAPN1-227ENST00000533909 DNMT3LQ9UJW3 386 aa14.07□□□□□ -0.16
CAPN1-227ENST00000533909 LSM7Q9UK45 103 aaKnown RBP14.07□□□□□ -0.16
CAPN1-227ENST00000533909 ARIH1Q9Y4X5 557 aaPredicted RBP14.07□□□□□ -0.16
CAPN1-227ENST00000533909 ANAPC1Q9H1A4 1944 aa14.07□□□□□ -0.16
CAPN1-227ENST00000533909 PATJQ8NI35 1801 aa14.06□□□□□ -0.16
CAPN1-227ENST00000533909 MYO16Q9Y6X6 1858 aa14.06□□□□□ -0.16
CAPN1-227ENST00000533909 BECN2A8MW95 431 aa14.06□□□□□ -0.16
CAPN1-227ENST00000533909 TULP2O00295 520 aa14.06□□□□□ -0.16
CAPN1-227ENST00000533909 SCAMP3O14828 347 aaKnown RBP14.06□□□□□ -0.16
CAPN1-227ENST00000533909 TBX18O95935 607 aa14.06□□□□□ -0.16
CAPN1-227ENST00000533909 CALCAP01258 141 aa14.06□□□□□ -0.16
CAPN1-227ENST00000533909 TARSP26639 723 aaKnown RBP14.06□□□□□ -0.16
CAPN1-227ENST00000533909 RGS7P49802 495 aa14.06□□□□□ -0.16
CAPN1-227ENST00000533909 BPIFB4P59827 614 aa14.06□□□□□ -0.16
CAPN1-227ENST00000533909 YWHAGP61981 247 aaKnown RBP eCLIP14.06□□□□□ -0.16
CAPN1-227ENST00000533909 PTK2Q05397 1052 aa14.06□□□□□ -0.16
CAPN1-227ENST00000533909 SKOR2Q2VWA4 1001 aaPredicted RBP14.06□□□□□ -0.16
CAPN1-227ENST00000533909 RAB41Q5JT25 222 aa14.06□□□□□ -0.16
CAPN1-227ENST00000533909 BTBD8Q5XKL5 378 aa14.06□□□□□ -0.16
CAPN1-227ENST00000533909 MIB1Q86YT6 1006 aa14.06□□□□□ -0.16
CAPN1-227ENST00000533909 KIAA1958Q8N8K9 716 aa14.06□□□□□ -0.16
CAPN1-227ENST00000533909 RIN3Q8TB24 985 aa14.06□□□□□ -0.16
CAPN1-227ENST00000533909 RNF139Q8WU17 664 aa14.06□□□□□ -0.16
CAPN1-227ENST00000533909 SHC3Q92529 594 aa14.06□□□□□ -0.16
CAPN1-227ENST00000533909 PDCL3Q9H2J4 239 aa14.06□□□□□ -0.16
CAPN1-227ENST00000533909 ECT2Q9H8V3 914 aa14.06□□□□□ -0.16
CAPN1-227ENST00000533909 NMUR1Q9HB89 426 aa14.06□□□□□ -0.16
CAPN1-227ENST00000533909 CYLDQ9NQC7 956 aa14.06□□□□□ -0.16
CAPN1-227ENST00000533909 HPS4Q9NQG7 708 aa14.06□□□□□ -0.16
CAPN1-227ENST00000533909 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.06□□□□□ -0.16
CAPN1-227ENST00000533909 CLIC5Q9NZA1 410 aa14.06□□□□□ -0.16
CAPN1-227ENST00000533909 TBC1D14Q9P2M4 693 aa14.06□□□□□ -0.16
CAPN1-227ENST00000533909 RASAL2Q9UJF2 1139 aa14.06□□□□□ -0.16
CAPN1-227ENST00000533909 STRIP2Q9ULQ0 834 aa14.06□□□□□ -0.16
CAPN1-227ENST00000533909 CNTN6Q9UQ52 1028 aa14.06□□□□□ -0.16
CAPN1-227ENST00000533909 MTF2Q9Y483 593 aaPredicted RBP14.06□□□□□ -0.16
CAPN1-227ENST00000533909 USP3Q9Y6I4 520 aa14.06□□□□□ -0.16
CAPN1-227ENST00000533909 KMT2EQ8IZD2 1858 aa14.06□□□□□ -0.16
CAPN1-227ENST00000533909 E2F8A0AVK6 867 aa14.05□□□□□ -0.16
CAPN1-227ENST00000533909 SYCE3A1L190 88 aa14.05□□□□□ -0.16
CAPN1-227ENST00000533909 PIK3R2O00459 728 aa14.05□□□□□ -0.16
CAPN1-227ENST00000533909 ADH1CP00326 375 aa14.05□□□□□ -0.16
CAPN1-227ENST00000533909 KRT9P35527 623 aa14.05□□□□□ -0.16
CAPN1-227ENST00000533909 PGFP49763 221 aa14.05□□□□□ -0.16
CAPN1-227ENST00000533909 COPB1P53618 953 aaKnown RBP14.05□□□□□ -0.16
CAPN1-227ENST00000533909 TPM4P67936 248 aa14.05□□□□□ -0.16
CAPN1-227ENST00000533909 EFEMP1Q12805 493 aa14.05□□□□□ -0.16
CAPN1-227ENST00000533909 GRSF1Q12849 480 aaKnown RBP eCLIP14.05□□□□□ -0.16
CAPN1-227ENST00000533909 PON2Q15165 354 aa14.05□□□□□ -0.16
CAPN1-227ENST00000533909 EML3Q32P44 896 aa14.05□□□□□ -0.16
CAPN1-227ENST00000533909 KCTD13Q8WZ19 329 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms