RNA–Protein interactions for RNA: ENST00000533818.5

CSDE1-215, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-215ENST00000533818 TRAK2O60296 914 aa11.32□□□□□ -0.6
CSDE1-215ENST00000533818 CXCL8P10145 99 aa11.32□□□□□ -0.6
CSDE1-215ENST00000533818 CYP2F1P24903 491 aa11.32□□□□□ -0.6
CSDE1-215ENST00000533818 SLC7A9P82251 487 aa11.32□□□□□ -0.6
CSDE1-215ENST00000533818 E2F1Q01094 437 aa11.32□□□□□ -0.6
CSDE1-215ENST00000533818 NFE2Q16621 373 aaPredicted RBP11.32□□□□□ -0.6
CSDE1-215ENST00000533818 ANO4Q32M45 955 aa11.32□□□□□ -0.6
CSDE1-215ENST00000533818 ZSCAN23Q3MJ62 389 aa11.32□□□□□ -0.6
CSDE1-215ENST00000533818 GRAMD4Q6IC98 578 aa11.32□□□□□ -0.6
CSDE1-215ENST00000533818 TMPRSS6Q8IU80 811 aa11.32□□□□□ -0.6
CSDE1-215ENST00000533818 SMC5Q8IY18 1101 aa11.32□□□□□ -0.6
CSDE1-215ENST00000533818 SAP25Q8TEE9 199 aa11.32□□□□□ -0.6
CSDE1-215ENST00000533818 SCFD1Q8WVM8 642 aa11.32□□□□□ -0.6
CSDE1-215ENST00000533818 SIPA1Q96FS4 1042 aa11.32□□□□□ -0.6
CSDE1-215ENST00000533818 ZBTB45Q96K62 511 aaPredicted RBP11.32□□□□□ -0.6
CSDE1-215ENST00000533818 ELF4Q99607 663 aaPredicted RBP11.32□□□□□ -0.6
CSDE1-215ENST00000533818 RNF38Q9H0F5 515 aa11.32□□□□□ -0.6
CSDE1-215ENST00000533818 C6orf106Q9H6K1 298 aaPredicted RBP11.32□□□□□ -0.6
CSDE1-215ENST00000533818 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.32□□□□□ -0.6
CSDE1-215ENST00000533818 CACNA1DQ01668 2161 aa11.32□□□□□ -0.6
CSDE1-215ENST00000533818 TTC26A0AVF1 554 aa11.31□□□□□ -0.6
CSDE1-215ENST00000533818 ARHGEF35A5YM69 484 aa11.31□□□□□ -0.6
CSDE1-215ENST00000533818 CCDC169A6NNP5 214 aa11.31□□□□□ -0.6
CSDE1-215ENST00000533818 PRRT4C9JH25 899 aa11.31□□□□□ -0.6
CSDE1-215ENST00000533818 CYB561D2O14569 222 aa11.31□□□□□ -0.6
CSDE1-215ENST00000533818 PPFIA2O75334 1257 aa11.31□□□□□ -0.6
CSDE1-215ENST00000533818 IGLV3-19P01714 112 aa11.31□□□□□ -0.6
CSDE1-215ENST00000533818 ITGB2P05107 769 aa11.31□□□□□ -0.6
CSDE1-215ENST00000533818 ACADMP11310 421 aa11.31□□□□□ -0.6
CSDE1-215ENST00000533818 GSPT1P15170 499 aaKnown RBP11.31□□□□□ -0.6
CSDE1-215ENST00000533818 ST3GAL1Q11201 340 aa11.31□□□□□ -0.6
CSDE1-215ENST00000533818 NECTIN1Q15223 517 aa11.31□□□□□ -0.6
CSDE1-215ENST00000533818 NTRK3Q16288 839 aa11.31□□□□□ -0.6
CSDE1-215ENST00000533818 WSCD1Q658N2 575 aa11.31□□□□□ -0.6
CSDE1-215ENST00000533818 USP53Q70EK8 1073 aa11.31□□□□□ -0.6
CSDE1-215ENST00000533818 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.31□□□□□ -0.6
CSDE1-215ENST00000533818 PRCCQ92733 491 aaPredicted RBP11.31□□□□□ -0.6
CSDE1-215ENST00000533818 CCNL2Q96S94 520 aaPredicted RBP11.31□□□□□ -0.6
CSDE1-215ENST00000533818 NAP1L4Q99733 375 aaKnown RBP11.31□□□□□ -0.6
CSDE1-215ENST00000533818 ACE2Q9BYF1 805 aaPredicted RBP11.31□□□□□ -0.6
CSDE1-215ENST00000533818 EPN3Q9H201 632 aa11.31□□□□□ -0.6
CSDE1-215ENST00000533818 DNAJC17Q9NVM6 304 aaKnown RBP11.31□□□□□ -0.6
CSDE1-215ENST00000533818 TRPM5Q9NZQ8 1165 aa11.31□□□□□ -0.6
CSDE1-215ENST00000533818 OBSL1O75147 1896 aa11.31□□□□□ -0.6
CSDE1-215ENST00000533818 PHLPP2Q6ZVD8 1323 aa11.31□□□□□ -0.6
CSDE1-215ENST00000533818 EFSO43281 561 aa11.3□□□□□ -0.6
CSDE1-215ENST00000533818 CLTAP09496 248 aa11.3□□□□□ -0.6
CSDE1-215ENST00000533818 CD27P26842 260 aa11.3□□□□□ -0.6
CSDE1-215ENST00000533818 TNFRSF8P28908 595 aa11.3□□□□□ -0.6
CSDE1-215ENST00000533818 RBMS1P29558 406 aaKnown RBP11.3□□□□□ -0.6
CSDE1-215ENST00000533818 TSPY1Q01534 308 aa11.3□□□□□ -0.6
CSDE1-215ENST00000533818 NCAPHQ15003 741 aa11.3□□□□□ -0.6
CSDE1-215ENST00000533818 SHBQ15464 509 aa11.3□□□□□ -0.6
CSDE1-215ENST00000533818 NPY5RQ15761 445 aa11.3□□□□□ -0.6
CSDE1-215ENST00000533818 SKIDA1Q1XH10 827 aa11.3□□□□□ -0.6
CSDE1-215ENST00000533818 KRTAP21-3Q3LHN1 58 aa11.3□□□□□ -0.6
CSDE1-215ENST00000533818 GALNT17Q6IS24 598 aa11.3□□□□□ -0.6
CSDE1-215ENST00000533818 TMEM25Q86YD3 366 aa11.3□□□□□ -0.6
CSDE1-215ENST00000533818 SCN4BQ8IWT1 228 aa11.3□□□□□ -0.6
CSDE1-215ENST00000533818 KIFAP3Q92845 792 aa11.3□□□□□ -0.6
CSDE1-215ENST00000533818 OTUB2Q96DC9 234 aa11.3□□□□□ -0.6
CSDE1-215ENST00000533818 PYM1Q9BRP8 204 aaKnown RBP11.3□□□□□ -0.6
CSDE1-215ENST00000533818 LSG1Q9H089 658 aaKnown RBP11.3□□□□□ -0.6
CSDE1-215ENST00000533818 SLC25A18Q9H1K4 315 aa11.3□□□□□ -0.6
CSDE1-215ENST00000533818 ZNF768Q9H5H4 540 aaKnown RBP11.3□□□□□ -0.6
CSDE1-215ENST00000533818 TMEM134Q9H6X4 195 aa11.3□□□□□ -0.6
CSDE1-215ENST00000533818 ABCB6Q9NP58 842 aa11.3□□□□□ -0.6
CSDE1-215ENST00000533818 SPHK2Q9NRA0 654 aa11.3□□□□□ -0.6
CSDE1-215ENST00000533818 WDR70Q9NW82 654 aa11.3□□□□□ -0.6
CSDE1-215ENST00000533818 STON1Q9Y6Q2 735 aa11.3□□□□□ -0.6
CSDE1-215ENST00000533818 TMEM131Q92545 1883 aa11.29□□□□□ -0.6
CSDE1-215ENST00000533818 CELSR2Q9HCU4 2923 aa11.29□□□□□ -0.6
CSDE1-215ENST00000533818 LACTBL1A8MY62 500 aa11.29□□□□□ -0.6
CSDE1-215ENST00000533818 VILLO15195 856 aa11.29□□□□□ -0.6
CSDE1-215ENST00000533818 ABL1P00519 1130 aa11.29□□□□□ -0.6
CSDE1-215ENST00000533818 SPATA31C1P0DKV0 1188 aa11.29□□□□□ -0.6
CSDE1-215ENST00000533818 IFNAR1P17181 557 aa11.29□□□□□ -0.6
CSDE1-215ENST00000533818 ACP1P24666 158 aa11.29□□□□□ -0.6
CSDE1-215ENST00000533818 SKOR1P84550 965 aa11.29□□□□□ -0.6
CSDE1-215ENST00000533818 GRIN1Q05586 938 aa11.29□□□□□ -0.6
CSDE1-215ENST00000533818 PPP2R3AQ06190 1150 aa11.29□□□□□ -0.6
CSDE1-215ENST00000533818 NOLC1Q14978 699 aaKnown RBP eCLIP11.29□□□□□ -0.6
CSDE1-215ENST00000533818 TTC22Q5TAA0 569 aa11.29□□□□□ -0.6
CSDE1-215ENST00000533818 SPATA1Q5VX52 437 aa11.29□□□□□ -0.6
CSDE1-215ENST00000533818 C9orf57Q5W0N0 161 aa11.29□□□□□ -0.6
CSDE1-215ENST00000533818 TAS1R3Q7RTX0 852 aa11.29□□□□□ -0.6
CSDE1-215ENST00000533818 DDX42Q86XP3 938 aaKnown RBP eCLIP11.29□□□□□ -0.6
CSDE1-215ENST00000533818 CACUL1Q86Y37 369 aa11.29□□□□□ -0.6
CSDE1-215ENST00000533818 PTRH1Q86Y79 214 aaKnown RBP11.29□□□□□ -0.6
CSDE1-215ENST00000533818 NSUN7Q8NE18 718 aaKnown RBP11.29□□□□□ -0.6
CSDE1-215ENST00000533818 BIRC7Q96CA5 298 aa11.29□□□□□ -0.6
CSDE1-215ENST00000533818 DEPDC7Q96QD5 511 aa11.29□□□□□ -0.6
CSDE1-215ENST00000533818 FBN3Q75N90 2809 aa11.28□□□□□ -0.6
CSDE1-215ENST00000533818 MYOFQ9NZM1 2061 aa11.28□□□□□ -0.6
CSDE1-215ENST00000533818 ZNF840PA6NDX5 716 aa11.28□□□□□ -0.6
CSDE1-215ENST00000533818 YKT6O15498 198 aa11.28□□□□□ -0.6
CSDE1-215ENST00000533818 SYNCRIPO60506 623 aaKnown RBP11.28□□□□□ -0.6
CSDE1-215ENST00000533818 TOM1L1O75674 476 aa11.28□□□□□ -0.6
CSDE1-215ENST00000533818 FSBPO95073 299 aa11.28□□□□□ -0.6
CSDE1-215ENST00000533818 GJB6O95452 261 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms