RNA–Protein interactions for RNA: ENST00000533643.1

COMMD9-208, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-208ENST00000533643 ZNF653Q96CK0 615 aa12.51□□□□□ -0.41
COMMD9-208ENST00000533643 ARHGEF26Q96DR7 871 aa12.51□□□□□ -0.41
COMMD9-208ENST00000533643 TRIM11Q96F44 468 aa12.51□□□□□ -0.41
COMMD9-208ENST00000533643 MSLNLQ96KJ4 702 aa12.51□□□□□ -0.41
COMMD9-208ENST00000533643 THAP2Q9H0W7 228 aa12.51□□□□□ -0.41
COMMD9-208ENST00000533643 PIDD1Q9HB75 910 aa12.51□□□□□ -0.41
COMMD9-208ENST00000533643 ASAH2Q9NR71 780 aa12.51□□□□□ -0.41
COMMD9-208ENST00000533643 WDR35Q9P2L0 1181 aa12.51□□□□□ -0.41
COMMD9-208ENST00000533643 UXTQ9UBK9 157 aaPredicted RBP12.51□□□□□ -0.41
COMMD9-208ENST00000533643 STRIP2Q9ULQ0 834 aa12.51□□□□□ -0.41
COMMD9-208ENST00000533643 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.5□□□□□ -0.41
COMMD9-208ENST00000533643 A0A1W2PQH9 124 aa12.5□□□□□ -0.41
COMMD9-208ENST00000533643 RCCD1A6NED2 376 aa12.5□□□□□ -0.41
COMMD9-208ENST00000533643 NRG2O14511 850 aaPredicted RBP12.5□□□□□ -0.41
COMMD9-208ENST00000533643 SART1O43290 800 aaKnown RBP12.5□□□□□ -0.41
COMMD9-208ENST00000533643 TADA3O75528 432 aa12.5□□□□□ -0.41
COMMD9-208ENST00000533643 IPO7O95373 1038 aaKnown RBP12.5□□□□□ -0.41
COMMD9-208ENST00000533643 GJB6O95452 261 aa12.5□□□□□ -0.41
COMMD9-208ENST00000533643 RHOP08100 348 aa12.5□□□□□ -0.41
COMMD9-208ENST00000533643 TMEM253P0C7T8 217 aa12.5□□□□□ -0.41
COMMD9-208ENST00000533643 MYL4P12829 197 aa12.5□□□□□ -0.41
COMMD9-208ENST00000533643 SCNN1AP37088 669 aa12.5□□□□□ -0.41
COMMD9-208ENST00000533643 CCR2P41597 374 aa12.5□□□□□ -0.41
COMMD9-208ENST00000533643 KRT83P78385 493 aa12.5□□□□□ -0.41
COMMD9-208ENST00000533643 PABPC1LQ4VXU2 614 aaKnown RBP12.5□□□□□ -0.41
COMMD9-208ENST00000533643 EFHC1Q5JVL4 640 aa12.5□□□□□ -0.41
COMMD9-208ENST00000533643 FAM102AQ5T9C2 384 aaPredicted RBP12.5□□□□□ -0.41
COMMD9-208ENST00000533643 PLEKHA7Q6IQ23 1121 aa12.5□□□□□ -0.41
COMMD9-208ENST00000533643 SLC26A9Q7LBE3 791 aa12.5□□□□□ -0.41
COMMD9-208ENST00000533643 C3orf20Q8ND61 904 aa12.5□□□□□ -0.41
COMMD9-208ENST00000533643 PPM1EQ8WY54 764 aa12.5□□□□□ -0.41
COMMD9-208ENST00000533643 TCEAL4Q96EI5 215 aa12.5□□□□□ -0.41
COMMD9-208ENST00000533643 SLITRK1Q96PX8 696 aa12.5□□□□□ -0.41
COMMD9-208ENST00000533643 ADAM7Q9H2U9 754 aa12.5□□□□□ -0.41
COMMD9-208ENST00000533643 NMUR1Q9HB89 426 aa12.5□□□□□ -0.41
COMMD9-208ENST00000533643 AVENQ9NQS1 362 aaPredicted RBP12.5□□□□□ -0.41
COMMD9-208ENST00000533643 ASNSD1Q9NWL6 643 aa12.5□□□□□ -0.41
COMMD9-208ENST00000533643 OSER1Q9NX31 292 aa12.5□□□□□ -0.41
COMMD9-208ENST00000533643 TRPM5Q9NZQ8 1165 aa12.5□□□□□ -0.41
COMMD9-208ENST00000533643 CNOT8Q9UFF9 292 aaKnown RBP12.5□□□□□ -0.41
COMMD9-208ENST00000533643 CDH22Q9UJ99 828 aa12.5□□□□□ -0.41
COMMD9-208ENST00000533643 TMEM59LQ9UK28 342 aa12.5□□□□□ -0.41
COMMD9-208ENST00000533643 INTUQ9ULD6 942 aa12.5□□□□□ -0.41
COMMD9-208ENST00000533643 ADGRG1Q9Y653 693 aa12.5□□□□□ -0.41
COMMD9-208ENST00000533643 MYH10P35580 1976 aa12.5□□□□□ -0.41
COMMD9-208ENST00000533643 ZNF840PA6NDX5 716 aa12.49□□□□□ -0.41
COMMD9-208ENST00000533643 SIGLEC16A6NMB1 481 aa12.49□□□□□ -0.41
COMMD9-208ENST00000533643 MOSPD3O75425 235 aa12.49□□□□□ -0.41
COMMD9-208ENST00000533643 GRAP2O75791 330 aa12.49□□□□□ -0.41
COMMD9-208ENST00000533643 FGF19O95750 216 aa12.49□□□□□ -0.41
COMMD9-208ENST00000533643 LTFP02788 710 aa12.49□□□□□ -0.41
COMMD9-208ENST00000533643 FYNP06241 537 aa12.49□□□□□ -0.41
COMMD9-208ENST00000533643 GLI1P08151 1106 aa12.49□□□□□ -0.41
COMMD9-208ENST00000533643 GABRR2P28476 465 aa12.49□□□□□ -0.41
COMMD9-208ENST00000533643 PPP3CCP48454 512 aa12.49□□□□□ -0.41
COMMD9-208ENST00000533643 YWHAGP61981 247 aaKnown RBP eCLIP12.49□□□□□ -0.41
COMMD9-208ENST00000533643 YWHAZP63104 245 aaKnown RBP12.49□□□□□ -0.41
COMMD9-208ENST00000533643 ITIH3Q06033 890 aa12.49□□□□□ -0.41
COMMD9-208ENST00000533643 MAMLD1Q13495 774 aa12.49□□□□□ -0.41
COMMD9-208ENST00000533643 SKIV2LQ15477 1246 aaKnown RBP12.49□□□□□ -0.41
COMMD9-208ENST00000533643 CLUL1Q15846 466 aa12.49□□□□□ -0.41
COMMD9-208ENST00000533643 SLC5A9Q2M3M2 681 aa12.49□□□□□ -0.41
COMMD9-208ENST00000533643 PRSS36Q5K4E3 855 aa12.49□□□□□ -0.41
COMMD9-208ENST00000533643 PPP1R15BQ5SWA1 713 aa12.49□□□□□ -0.41
COMMD9-208ENST00000533643 SNX30Q5VWJ9 437 aa12.49□□□□□ -0.41
COMMD9-208ENST00000533643 BSPRYQ5W0U4 402 aa12.49□□□□□ -0.41
COMMD9-208ENST00000533643 DNAJC24Q6P3W2 148 aa12.49□□□□□ -0.41
COMMD9-208ENST00000533643 ARHGAP18Q8N392 663 aa12.49□□□□□ -0.41
COMMD9-208ENST00000533643 LEMD2Q8NC56 503 aa12.49□□□□□ -0.41
COMMD9-208ENST00000533643 PDZD8Q8NEN9 1154 aa12.49□□□□□ -0.41
COMMD9-208ENST00000533643 SHKBP1Q8TBC3 707 aa12.49□□□□□ -0.41
COMMD9-208ENST00000533643 CTNNBL1Q8WYA6 563 aaPredicted RBP12.49□□□□□ -0.41
COMMD9-208ENST00000533643 FAM149B1Q96BN6 582 aa12.49□□□□□ -0.41
COMMD9-208ENST00000533643 UBE2ZQ9H832 354 aaPredicted RBP12.49□□□□□ -0.41
COMMD9-208ENST00000533643 LUC7LQ9NQ29 371 aaKnown RBP12.49□□□□□ -0.41
COMMD9-208ENST00000533643 TLR8Q9NR97 1041 aaKnown RBP12.49□□□□□ -0.41
COMMD9-208ENST00000533643 PARVAQ9NVD7 372 aa12.49□□□□□ -0.41
COMMD9-208ENST00000533643 MYO1AQ9UBC5 1043 aa12.49□□□□□ -0.41
COMMD9-208ENST00000533643 TFR2Q9UP52 801 aa12.49□□□□□ -0.41
COMMD9-208ENST00000533643 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.49□□□□□ -0.41
COMMD9-208ENST00000533643 GREB1Q4ZG55 1949 aa12.49□□□□□ -0.41
COMMD9-208ENST00000533643 A0A0U1RQJ8 604 aa12.48□□□□□ -0.41
COMMD9-208ENST00000533643 A0A1W2PRU2 124 aa12.48□□□□□ -0.41
COMMD9-208ENST00000533643 H3BQ06 376 aaPredicted RBP12.48□□□□□ -0.41
COMMD9-208ENST00000533643 HSF2BPO75031 334 aa12.48□□□□□ -0.41
COMMD9-208ENST00000533643 ABL1P00519 1130 aa12.48□□□□□ -0.41
COMMD9-208ENST00000533643 KRT3P12035 628 aa12.48□□□□□ -0.41
COMMD9-208ENST00000533643 GJA1P17302 382 aa12.48□□□□□ -0.41
COMMD9-208ENST00000533643 CDC25CP30307 473 aa12.48□□□□□ -0.41
COMMD9-208ENST00000533643 PSEN1P49768 467 aa12.48□□□□□ -0.41
COMMD9-208ENST00000533643 VAV2P52735 878 aa12.48□□□□□ -0.41
COMMD9-208ENST00000533643 RNASE9P60153 205 aaKnown RBP12.48□□□□□ -0.41
COMMD9-208ENST00000533643 CES5AQ6NT32 575 aa12.48□□□□□ -0.41
COMMD9-208ENST00000533643 PDZD4Q76G19 769 aaPredicted RBP12.48□□□□□ -0.41
COMMD9-208ENST00000533643 KIAA1328Q86T90 577 aa12.48□□□□□ -0.41
COMMD9-208ENST00000533643 SMRP1Q8NCR6 262 aa12.48□□□□□ -0.41
COMMD9-208ENST00000533643 JOSD2Q8TAC2 188 aa12.48□□□□□ -0.41
COMMD9-208ENST00000533643 ATRIPQ8WXE1 791 aa12.48□□□□□ -0.41
COMMD9-208ENST00000533643 EDEM1Q92611 657 aa12.48□□□□□ -0.41
COMMD9-208ENST00000533643 SLC2A13Q96QE2 648 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms