RNA–Protein interactions for RNA: ENST00000533482.5

RAD50-209, Transcript of RAD50 double strand break repair protein, humanhuman

TSL 1 (best)

Gene RAD50, Length 4,373 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD50-209ENST00000533482 KCNA2P16389 499 aa12.87□□□□□ -0.35
RAD50-209ENST00000533482 SPIRE1Q08AE8 756 aa12.87□□□□□ -0.35
RAD50-209ENST00000533482 KRT80Q6KB66 452 aa12.87□□□□□ -0.35
RAD50-209ENST00000533482 LCA5Q86VQ0 697 aa12.87□□□□□ -0.35
RAD50-209ENST00000533482 CHSY1Q86X52 802 aa12.87□□□□□ -0.35
RAD50-209ENST00000533482 PTPRN2Q92932 1015 aa12.87□□□□□ -0.35
RAD50-209ENST00000533482 SIX2Q9NPC8 291 aa12.87□□□□□ -0.35
RAD50-209ENST00000533482 MAFO75444 373 aaPredicted RBP12.86□□□□□ -0.35
RAD50-209ENST00000533482 AMPD1P23109 780 aa12.86□□□□□ -0.35
RAD50-209ENST00000533482 EIF4BP23588 611 aaKnown RBP12.86□□□□□ -0.35
RAD50-209ENST00000533482 TNFRSF8P28908 595 aa12.86□□□□□ -0.35
RAD50-209ENST00000533482 PAPOLAP51003 745 aaKnown RBP12.86□□□□□ -0.35
RAD50-209ENST00000533482 BCAT1P54687 386 aa12.86□□□□□ -0.35
RAD50-209ENST00000533482 NCKAP1LP55160 1127 aa12.86□□□□□ -0.35
RAD50-209ENST00000533482 SREBF2Q12772 1141 aa12.86□□□□□ -0.35
RAD50-209ENST00000533482 MMRN1Q13201 1228 aa12.86□□□□□ -0.35
RAD50-209ENST00000533482 HIC1Q14526 733 aa12.86□□□□□ -0.35
RAD50-209ENST00000533482 ANO4Q32M45 955 aa12.86□□□□□ -0.35
RAD50-209ENST00000533482 GCNAQ96QF7 691 aa12.86□□□□□ -0.35
RAD50-209ENST00000533482 ANLNQ9NQW6 1124 aa12.86□□□□□ -0.35
RAD50-209ENST00000533482 ZNF214Q9UL59 606 aaPredicted RBP12.86□□□□□ -0.35
RAD50-209ENST00000533482 PRRG1O14668 218 aa12.86□□□□□ -0.35
RAD50-209ENST00000533482 SPAG6O75602 509 aa12.86□□□□□ -0.35
RAD50-209ENST00000533482 GLRBP48167 497 aa12.86□□□□□ -0.35
RAD50-209ENST00000533482 BIRC2Q13490 618 aa12.86□□□□□ -0.35
RAD50-209ENST00000533482 FSCN1Q16658 493 aaKnown RBP12.86□□□□□ -0.35
RAD50-209ENST00000533482 QPCTQ16769 361 aa12.86□□□□□ -0.35
RAD50-209ENST00000533482 DEFB128Q7Z7B8 93 aa12.86□□□□□ -0.35
RAD50-209ENST00000533482 EXOC3L1Q86VI1 746 aa12.86□□□□□ -0.35
RAD50-209ENST00000533482 GRID1Q9ULK0 1009 aa12.86□□□□□ -0.35
RAD50-209ENST00000533482 ABCC6O95255 1503 aa12.86□□□□□ -0.35
RAD50-209ENST00000533482 LOC102724159A0A0B4J2E5 919 aa12.86□□□□□ -0.35
RAD50-209ENST00000533482 USP12O75317 370 aa12.86□□□□□ -0.35
RAD50-209ENST00000533482 CBX6O95503 412 aa12.86□□□□□ -0.35
RAD50-209ENST00000533482 CYP2F1P24903 491 aa12.86□□□□□ -0.35
RAD50-209ENST00000533482 RBL1P28749 1068 aa12.86□□□□□ -0.35
RAD50-209ENST00000533482 PTK6Q13882 451 aa12.86□□□□□ -0.35
RAD50-209ENST00000533482 ITIH4Q14624 930 aa12.86□□□□□ -0.35
RAD50-209ENST00000533482 PWP2Q15269 919 aaKnown RBP12.86□□□□□ -0.35
RAD50-209ENST00000533482 TTC27Q6P3X3 843 aa12.86□□□□□ -0.35
RAD50-209ENST00000533482 TAS2R42Q7RTR8 314 aa12.86□□□□□ -0.35
RAD50-209ENST00000533482 GPR142Q7Z601 462 aa12.86□□□□□ -0.35
RAD50-209ENST00000533482 CD302Q8IX05 232 aa12.86□□□□□ -0.35
RAD50-209ENST00000533482 C3orf20Q8ND61 904 aa12.86□□□□□ -0.35
RAD50-209ENST00000533482 HELQQ8TDG4 1101 aa12.86□□□□□ -0.35
RAD50-209ENST00000533482 ASB7Q9H672 318 aa12.86□□□□□ -0.35
RAD50-209ENST00000533482 AFF4Q9UHB7 1163 aaKnown RBP12.86□□□□□ -0.35
RAD50-209ENST00000533482 SHOC2Q9UQ13 582 aa12.86□□□□□ -0.35
RAD50-209ENST00000533482 PCDHA2Q9Y5H9 948 aa12.86□□□□□ -0.35
RAD50-209ENST00000533482 ONECUT3O60422 494 aaPredicted RBP12.85□□□□□ -0.35
RAD50-209ENST00000533482 JCHAINP01591 159 aa12.85□□□□□ -0.35
RAD50-209ENST00000533482 S100BP04271 92 aaPredicted RBP12.85□□□□□ -0.35
RAD50-209ENST00000533482 AP2B1P63010 937 aa12.85□□□□□ -0.35
RAD50-209ENST00000533482 VEPH1Q14D04 833 aa12.85□□□□□ -0.35
RAD50-209ENST00000533482 SCG3Q8WXD2 468 aaKnown RBP12.85□□□□□ -0.35
RAD50-209ENST00000533482 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.85□□□□□ -0.35
RAD50-209ENST00000533482 NSL1Q96IY1 281 aa12.85□□□□□ -0.35
RAD50-209ENST00000533482 ACO2Q99798 780 aaKnown RBP12.85□□□□□ -0.35
RAD50-209ENST00000533482 GOLGA2P5Q9HBQ8 144 aa12.85□□□□□ -0.35
RAD50-209ENST00000533482 SLCO1B3Q9NPD5 702 aa12.85□□□□□ -0.35
RAD50-209ENST00000533482 DONSONQ9NYP3 566 aa12.85□□□□□ -0.35
RAD50-209ENST00000533482 GPR182O15218 404 aa12.85□□□□□ -0.35
RAD50-209ENST00000533482 HMGCRP04035 888 aa12.85□□□□□ -0.35
RAD50-209ENST00000533482 ARF4P18085 180 aaPredicted RBP12.85□□□□□ -0.35
RAD50-209ENST00000533482 TGM2P21980 687 aa12.85□□□□□ -0.35
RAD50-209ENST00000533482 SERPINB9P50453 376 aa12.85□□□□□ -0.35
RAD50-209ENST00000533482 RPL10AP62906 217 aaKnown RBP12.85□□□□□ -0.35
RAD50-209ENST00000533482 FAAP100Q0VG06 881 aa12.85□□□□□ -0.35
RAD50-209ENST00000533482 CNGA2Q16280 664 aa12.85□□□□□ -0.35
RAD50-209ENST00000533482 SLFN11Q7Z7L1 901 aa12.85□□□□□ -0.35
RAD50-209ENST00000533482 KATNAL2Q8IYT4 538 aa12.85□□□□□ -0.35
RAD50-209ENST00000533482 MTO1Q9Y2Z2 717 aaKnown RBP12.85□□□□□ -0.35
RAD50-209ENST00000533482 KLRG2A4D1S0 409 aaPredicted RBP12.85□□□□□ -0.35
RAD50-209ENST00000533482 OPLAHO14841 1288 aa12.85□□□□□ -0.35
RAD50-209ENST00000533482 ANP32DO95626 131 aa12.85□□□□□ -0.35
RAD50-209ENST00000533482 SPRP35270 261 aaPredicted RBP12.85□□□□□ -0.35
RAD50-209ENST00000533482 PSEN2P49810 448 aa12.85□□□□□ -0.35
RAD50-209ENST00000533482 JAM2P57087 298 aa12.85□□□□□ -0.35
RAD50-209ENST00000533482 ERMARDQ5T6L9 678 aa12.85□□□□□ -0.35
RAD50-209ENST00000533482 SLC26A11Q86WA9 606 aa12.85□□□□□ -0.35
RAD50-209ENST00000533482 MSL3Q8N5Y2 521 aaKnown RBP12.85□□□□□ -0.35
RAD50-209ENST00000533482 LPPQ93052 612 aa12.85□□□□□ -0.35
RAD50-209ENST00000533482 TMA16Q96EY4 203 aaKnown RBP12.85□□□□□ -0.35
RAD50-209ENST00000533482 RPRD1AQ96P16 312 aaPredicted RBP12.85□□□□□ -0.35
RAD50-209ENST00000533482 XPNPEP3Q9NQH7 507 aa12.85□□□□□ -0.35
RAD50-209ENST00000533482 SCAMP3O14828 347 aaKnown RBP12.85□□□□□ -0.35
RAD50-209ENST00000533482 FSCN2O14926 492 aa12.85□□□□□ -0.35
RAD50-209ENST00000533482 CCND1P24385 295 aa12.85□□□□□ -0.35
RAD50-209ENST00000533482 DNAJB2P25686 324 aa12.85□□□□□ -0.35
RAD50-209ENST00000533482 AVPR1AP37288 418 aa12.85□□□□□ -0.35
RAD50-209ENST00000533482 ABCG1P45844 678 aa12.85□□□□□ -0.35
RAD50-209ENST00000533482 RECQLP46063 649 aaPredicted RBP12.85□□□□□ -0.35
RAD50-209ENST00000533482 MAP7Q14244 749 aa12.85□□□□□ -0.35
RAD50-209ENST00000533482 TMTC4Q5T4D3 741 aa12.85□□□□□ -0.35
RAD50-209ENST00000533482 CAPRIN2Q6IMN6 1127 aaKnown RBP12.85□□□□□ -0.35
RAD50-209ENST00000533482 SYT15Q9BQS2 421 aa12.85□□□□□ -0.35
RAD50-209ENST00000533482 EFHD1Q9BUP0 239 aa12.85□□□□□ -0.35
RAD50-209ENST00000533482 LRRC19Q9H756 370 aa12.85□□□□□ -0.35
RAD50-209ENST00000533482 PPCSQ9HAB8 311 aa12.85□□□□□ -0.35
RAD50-209ENST00000533482 CYP3A43Q9HB55 503 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms