RNA–Protein interactions for RNA: ENST00000533346.5

NUP98-220, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-220ENST00000533346 ATP2A3Q93084 1043 aa10.37□□□□□ -0.75
NUP98-220ENST00000533346 EXOC4Q96A65 974 aa10.37□□□□□ -0.75
NUP98-220ENST00000533346 HSFY1Q96LI6 401 aa10.37□□□□□ -0.75
NUP98-220ENST00000533346 CDK5RAP1Q96SZ6 601 aaKnown RBP10.37□□□□□ -0.75
NUP98-220ENST00000533346 TUBGCP2Q9BSJ2 902 aa10.37□□□□□ -0.75
NUP98-220ENST00000533346 FOXQ1Q9C009 403 aa10.37□□□□□ -0.75
NUP98-220ENST00000533346 INTS2Q9H0H0 1204 aaKnown RBP10.37□□□□□ -0.75
NUP98-220ENST00000533346 NDST4Q9H3R1 872 aa10.37□□□□□ -0.75
NUP98-220ENST00000533346 ECT2Q9H8V3 914 aa10.37□□□□□ -0.75
NUP98-220ENST00000533346 TRPC7Q9HCX4 862 aa10.37□□□□□ -0.75
NUP98-220ENST00000533346 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.37□□□□□ -0.75
NUP98-220ENST00000533346 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.37□□□□□ -0.75
NUP98-220ENST00000533346 ANO10Q9NW15 660 aa10.37□□□□□ -0.75
NUP98-220ENST00000533346 DUS2Q9NX74 493 aaKnown RBP10.37□□□□□ -0.75
NUP98-220ENST00000533346 GMIPQ9P107 970 aa10.37□□□□□ -0.75
NUP98-220ENST00000533346 APEX2Q9UBZ4 518 aa10.37□□□□□ -0.75
NUP98-220ENST00000533346 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.37□□□□□ -0.75
NUP98-220ENST00000533346 CACNA1IQ9P0X4 2223 aa10.36□□□□□ -0.75
NUP98-220ENST00000533346 OTOL1A6NHN0 477 aaPredicted RBP10.36□□□□□ -0.75
NUP98-220ENST00000533346 STK25O00506 426 aa10.36□□□□□ -0.75
NUP98-220ENST00000533346 GREM1O60565 184 aa10.36□□□□□ -0.75
NUP98-220ENST00000533346 TLR5O60602 858 aa10.36□□□□□ -0.75
NUP98-220ENST00000533346 NFATC1O95644 943 aa10.36□□□□□ -0.75
NUP98-220ENST00000533346 DCNP07585 359 aaKnown RBP10.36□□□□□ -0.75
NUP98-220ENST00000533346 SLC9A1P19634 815 aa10.36□□□□□ -0.75
NUP98-220ENST00000533346 RFX1P22670 979 aa10.36□□□□□ -0.75
NUP98-220ENST00000533346 GJA4P35212 333 aa10.36□□□□□ -0.75
NUP98-220ENST00000533346 ATP5C1P36542 298 aaKnown RBP10.36□□□□□ -0.75
NUP98-220ENST00000533346 EIF2DP41214 584 aaKnown RBP10.36□□□□□ -0.75
NUP98-220ENST00000533346 NBL1P41271 181 aa10.36□□□□□ -0.75
NUP98-220ENST00000533346 KPNA1P52294 538 aaPredicted RBP10.36□□□□□ -0.75
NUP98-220ENST00000533346 MFAP3P55082 362 aa10.36□□□□□ -0.75
NUP98-220ENST00000533346 PDE4CQ08493 712 aa10.36□□□□□ -0.75
NUP98-220ENST00000533346 LRMPQ12912 555 aa10.36□□□□□ -0.75
NUP98-220ENST00000533346 NR1H3Q13133 447 aa10.36□□□□□ -0.75
NUP98-220ENST00000533346 LRRC32Q14392 662 aa10.36□□□□□ -0.75
NUP98-220ENST00000533346 UBXN2BQ14CS0 331 aa10.36□□□□□ -0.75
NUP98-220ENST00000533346 ANGPT1Q15389 498 aa10.36□□□□□ -0.75
NUP98-220ENST00000533346 TPD52L1Q16890 204 aaPredicted RBP10.36□□□□□ -0.75
NUP98-220ENST00000533346 TCP11X2Q5H9J9 407 aa10.36□□□□□ -0.75
NUP98-220ENST00000533346 CCDC183Q5T5S1 534 aa10.36□□□□□ -0.75
NUP98-220ENST00000533346 TXNDC11Q6PKC3 985 aa10.36□□□□□ -0.75
NUP98-220ENST00000533346 SASS6Q6UVJ0 657 aa10.36□□□□□ -0.75
NUP98-220ENST00000533346 BEND5Q7L4P6 421 aa10.36□□□□□ -0.75
NUP98-220ENST00000533346 BHLHA9Q7RTU4 235 aa10.36□□□□□ -0.75
NUP98-220ENST00000533346 SCD5Q86SK9 330 aa10.36□□□□□ -0.75
NUP98-220ENST00000533346 GPIHBP1Q8IV16 184 aa10.36□□□□□ -0.75
NUP98-220ENST00000533346 MAML2Q8IZL2 1156 aaPredicted RBP10.36□□□□□ -0.75
NUP98-220ENST00000533346 CPA6Q8N4T0 437 aa10.36□□□□□ -0.75
NUP98-220ENST00000533346 IRGQQ8WZA9 623 aa10.36□□□□□ -0.75
NUP98-220ENST00000533346 TFAP2BQ92481 460 aa10.36□□□□□ -0.75
NUP98-220ENST00000533346 SHC3Q92529 594 aa10.36□□□□□ -0.75
NUP98-220ENST00000533346 KAT5Q92993 513 aa10.36□□□□□ -0.75
NUP98-220ENST00000533346 ZFYVE19Q96K21 471 aa10.36□□□□□ -0.75
NUP98-220ENST00000533346 ZSWIM1Q9BR11 485 aa10.36□□□□□ -0.75
NUP98-220ENST00000533346 KLF16Q9BXK1 252 aaPredicted RBP10.36□□□□□ -0.75
NUP98-220ENST00000533346 SEMA4AQ9H3S1 761 aa10.36□□□□□ -0.75
NUP98-220ENST00000533346 EBF3Q9H4W6 596 aa10.36□□□□□ -0.75
NUP98-220ENST00000533346 NMUR1Q9HB89 426 aa10.36□□□□□ -0.75
NUP98-220ENST00000533346 SIX2Q9NPC8 291 aa10.36□□□□□ -0.75
NUP98-220ENST00000533346 CNGB3Q9NQW8 809 aa10.36□□□□□ -0.75
NUP98-220ENST00000533346 PRMT8Q9NR22 394 aaPredicted RBP10.36□□□□□ -0.75
NUP98-220ENST00000533346 SAMSN1Q9NSI8 373 aaKnown RBP10.36□□□□□ -0.75
NUP98-220ENST00000533346 OSER1Q9NX31 292 aa10.36□□□□□ -0.75
NUP98-220ENST00000533346 HESX1Q9UBX0 185 aa10.36□□□□□ -0.75
NUP98-220ENST00000533346 NFE2L3Q9Y4A8 694 aa10.36□□□□□ -0.75
NUP98-220ENST00000533346 DAAM1Q9Y4D1 1078 aa10.36□□□□□ -0.75
NUP98-220ENST00000533346 PCDHB4Q9Y5E5 795 aa10.36□□□□□ -0.75
NUP98-220ENST00000533346 CPQQ9Y646 472 aa10.36□□□□□ -0.75
NUP98-220ENST00000533346 CHURC1-FNTBB4DL54 471 aa10.35□□□□□ -0.75
NUP98-220ENST00000533346 MBL2P11226 248 aaPredicted RBP10.35□□□□□ -0.75
NUP98-220ENST00000533346 RARGP13631 454 aa10.35□□□□□ -0.75
NUP98-220ENST00000533346 DRD1P21728 446 aa10.35□□□□□ -0.75
NUP98-220ENST00000533346 CD72P21854 359 aa10.35□□□□□ -0.75
NUP98-220ENST00000533346 HOXA6P31267 233 aa10.35□□□□□ -0.75
NUP98-220ENST00000533346 GPD2P43304 727 aa10.35□□□□□ -0.75
NUP98-220ENST00000533346 MTIF2P46199 727 aaKnown RBP10.35□□□□□ -0.75
NUP98-220ENST00000533346 IFNAR2P48551 515 aa10.35□□□□□ -0.75
NUP98-220ENST00000533346 PGFP49763 221 aa10.35□□□□□ -0.75
NUP98-220ENST00000533346 TNK2Q07912 1038 aa10.35□□□□□ -0.75
NUP98-220ENST00000533346 KCNMA1Q12791 1236 aa10.35□□□□□ -0.75
NUP98-220ENST00000533346 IFRD2Q12894 506 aaPredicted RBP10.35□□□□□ -0.75
NUP98-220ENST00000533346 GAB4Q2WGN9 574 aa10.35□□□□□ -0.75
NUP98-220ENST00000533346 FBXO43Q4G163 708 aa10.35□□□□□ -0.75
NUP98-220ENST00000533346 RRAGAQ7L523 313 aa10.35□□□□□ -0.75
NUP98-220ENST00000533346 RBBP8NLQ8NC74 664 aaPredicted RBP10.35□□□□□ -0.75
NUP98-220ENST00000533346 ZNF606Q8WXB4 792 aa10.35□□□□□ -0.75
NUP98-220ENST00000533346 BPIFA3Q9BQP9 254 aa10.35□□□□□ -0.75
NUP98-220ENST00000533346 FAM126AQ9BYI3 521 aaPredicted RBP10.35□□□□□ -0.75
NUP98-220ENST00000533346 LINC00597Q9H2U6 94 aa10.35□□□□□ -0.75
NUP98-220ENST00000533346 CCSER2Q9H7U1 834 aa10.35□□□□□ -0.75
NUP98-220ENST00000533346 LMAN1LQ9HAT1 526 aa10.35□□□□□ -0.75
NUP98-220ENST00000533346 UBE2TQ9NPD8 197 aaPredicted RBP10.35□□□□□ -0.75
NUP98-220ENST00000533346 DNMT3LQ9UJW3 386 aa10.35□□□□□ -0.75
NUP98-220ENST00000533346 PCDHGC3Q9UN70 934 aa10.35□□□□□ -0.75
NUP98-220ENST00000533346 MYOFQ9NZM1 2061 aa10.35□□□□□ -0.75
NUP98-220ENST00000533346 A0A1W2PQH9 124 aa10.34□□□□□ -0.75
NUP98-220ENST00000533346 BECN2A8MW95 431 aa10.34□□□□□ -0.75
NUP98-220ENST00000533346 KCNJ18B7U540 433 aa10.34□□□□□ -0.75
NUP98-220ENST00000533346 CYP26A1O43174 497 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms