RNA–Protein interactions for RNA: ENST00000532600.1

SSH3-209, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 555 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-209ENST00000532600 MBD3O95983 291 aa20.02■□□□□ 0.8
SSH3-209ENST00000532600 FAM200BP0CF97 657 aa20.02■□□□□ 0.8
SSH3-209ENST00000532600 MXI1P50539 228 aa20.02■□□□□ 0.8
SSH3-209ENST00000532600 TUBP50607 506 aa20.02■□□□□ 0.8
SSH3-209ENST00000532600 FBXO43Q4G163 708 aa20.02■□□□□ 0.8
SSH3-209ENST00000532600 LAIR1Q6GTX8 287 aa20.02■□□□□ 0.8
SSH3-209ENST00000532600 TATDN2Q93075 761 aa20.02■□□□□ 0.8
SSH3-209ENST00000532600 JAKMIP2Q96AA8 810 aa20.02■□□□□ 0.8
SSH3-209ENST00000532600 IMPG2Q9BZV3 1241 aa20.02■□□□□ 0.8
SSH3-209ENST00000532600 NMUR1Q9HB89 426 aa20.02■□□□□ 0.8
SSH3-209ENST00000532600 RAB20Q9NX57 234 aa20.02■□□□□ 0.8
SSH3-209ENST00000532600 ATG13O75143 517 aa20.01■□□□□ 0.79
SSH3-209ENST00000532600 EPB41P11171 864 aaKnown RBP20.01■□□□□ 0.79
SSH3-209ENST00000532600 CNR2P34972 360 aa20.01■□□□□ 0.79
SSH3-209ENST00000532600 NR1H3Q13133 447 aa20.01■□□□□ 0.79
SSH3-209ENST00000532600 ZNF394Q53GI3 561 aa20.01■□□□□ 0.79
SSH3-209ENST00000532600 PPP1R26Q5T8A7 1209 aaPredicted RBP20.01■□□□□ 0.79
SSH3-209ENST00000532600 FBXL13Q8NEE6 735 aa20.01■□□□□ 0.79
SSH3-209ENST00000532600 HHIPQ96QV1 700 aa20.01■□□□□ 0.79
SSH3-209ENST00000532600 TMEM63CQ9P1W3 806 aa20.01■□□□□ 0.79
SSH3-209ENST00000532600 E2F8A0AVK6 867 aa20■□□□□ 0.79
SSH3-209ENST00000532600 PPP1R3GB7ZBB8 358 aa20■□□□□ 0.79
SSH3-209ENST00000532600 SLC16A3O15427 465 aaKnown RBP20■□□□□ 0.79
SSH3-209ENST00000532600 RAD23BP54727 409 aa20■□□□□ 0.79
SSH3-209ENST00000532600 RBM43Q6ZSC3 357 aaKnown RBP20■□□□□ 0.79
SSH3-209ENST00000532600 SYT13Q7L8C5 426 aa20■□□□□ 0.79
SSH3-209ENST00000532600 SCD5Q86SK9 330 aa20■□□□□ 0.79
SSH3-209ENST00000532600 DDX42Q86XP3 938 aaKnown RBP eCLIP20■□□□□ 0.79
SSH3-209ENST00000532600 BBS7Q8IWZ6 715 aa20■□□□□ 0.79
SSH3-209ENST00000532600 PHTF2Q8N3S3 785 aa20■□□□□ 0.79
SSH3-209ENST00000532600 FAM160A2Q8N612 972 aaPredicted RBP20■□□□□ 0.79
SSH3-209ENST00000532600 SLC4A11Q8NBS3 891 aa20■□□□□ 0.79
SSH3-209ENST00000532600 USP33Q8TEY7 942 aa20■□□□□ 0.79
SSH3-209ENST00000532600 SLC35C1Q96A29 364 aa20■□□□□ 0.79
SSH3-209ENST00000532600 KLF16Q9BXK1 252 aaPredicted RBP20■□□□□ 0.79
SSH3-209ENST00000532600 FBXO44Q9H4M3 255 aa20■□□□□ 0.79
SSH3-209ENST00000532600 CISHQ9NSE2 258 aa20■□□□□ 0.79
SSH3-209ENST00000532600 DLL3Q9NYJ7 618 aa20■□□□□ 0.79
SSH3-209ENST00000532600 SLC8A2Q9UPR5 921 aa20■□□□□ 0.79
SSH3-209ENST00000532600 SCML2Q9UQR0 700 aa20■□□□□ 0.79
SSH3-209ENST00000532600 COQ4Q9Y3A0 265 aa20■□□□□ 0.79
SSH3-209ENST00000532600 CCDC163A0A0D9SF12 145 aa19.99■□□□□ 0.79
SSH3-209ENST00000532600 SLC9A3R1O14745 358 aaPredicted RBP19.99■□□□□ 0.79
SSH3-209ENST00000532600 TLR5O60602 858 aa19.99■□□□□ 0.79
SSH3-209ENST00000532600 RETP07949 1114 aa19.99■□□□□ 0.79
SSH3-209ENST00000532600 ACO1P21399 889 aaKnown RBP19.99■□□□□ 0.79
SSH3-209ENST00000532600 SEC13P55735 322 aa19.99■□□□□ 0.79
SSH3-209ENST00000532600 FKBP3Q00688 224 aaKnown RBP19.99■□□□□ 0.79
SSH3-209ENST00000532600 SPEM2Q0P670 501 aa19.99■□□□□ 0.79
SSH3-209ENST00000532600 DMC1Q14565 340 aa19.99■□□□□ 0.79
SSH3-209ENST00000532600 RSPO4Q2I0M5 234 aaPredicted RBP19.99■□□□□ 0.79
SSH3-209ENST00000532600 LY6G5CQ5SRR4 150 aa19.99■□□□□ 0.79
SSH3-209ENST00000532600 FAXDC2Q96IV6 333 aa19.99■□□□□ 0.79
SSH3-209ENST00000532600 DUSP9Q99956 384 aaKnown RBP19.99■□□□□ 0.79
SSH3-209ENST00000532600 DUSP16Q9BY84 665 aa19.99■□□□□ 0.79
SSH3-209ENST00000532600 PNPLA8Q9NP80 782 aa19.99■□□□□ 0.79
SSH3-209ENST00000532600 CYLDQ9NQC7 956 aa19.99■□□□□ 0.79
SSH3-209ENST00000532600 GMEB2Q9UKD1 530 aa19.99■□□□□ 0.79
SSH3-209ENST00000532600 A0A1W2PQH9 124 aa19.98■□□□□ 0.79
SSH3-209ENST00000532600 IRF1P10914 325 aa19.98■□□□□ 0.79
SSH3-209ENST00000532600 ADH5P11766 374 aa19.98■□□□□ 0.79
SSH3-209ENST00000532600 HNRNPLP14866 589 aaKnown RBP eCLIP19.98■□□□□ 0.79
SSH3-209ENST00000532600 KIF11P52732 1056 aa19.98■□□□□ 0.79
SSH3-209ENST00000532600 DCAF17Q5H9S7 520 aaPredicted RBP19.98■□□□□ 0.79
SSH3-209ENST00000532600 ETFBKMTQ8IXQ9 262 aa19.98■□□□□ 0.79
SSH3-209ENST00000532600 CAMKK1Q8N5S9 505 aa19.98■□□□□ 0.79
SSH3-209ENST00000532600 GAB3Q8WWW8 586 aa19.98■□□□□ 0.79
SSH3-209ENST00000532600 SECISBP2LQ93073 1101 aaKnown RBP19.98■□□□□ 0.79
SSH3-209ENST00000532600 TLR8Q9NR97 1041 aaKnown RBP19.98■□□□□ 0.79
SSH3-209ENST00000532600 TBC1D14Q9P2M4 693 aa19.98■□□□□ 0.79
SSH3-209ENST00000532600 NUDT5Q9UKK9 219 aa19.98■□□□□ 0.79
SSH3-209ENST00000532600 RAB23Q9ULC3 237 aa19.98■□□□□ 0.79
SSH3-209ENST00000532600 USP3Q9Y6I4 520 aa19.98■□□□□ 0.79
SSH3-209ENST00000532600 A0A0A0MRY4 1105 aa19.97■□□□□ 0.79
SSH3-209ENST00000532600 MDM4O15151 490 aa19.97■□□□□ 0.79
SSH3-209ENST00000532600 STX10O60499 249 aa19.97■□□□□ 0.79
SSH3-209ENST00000532600 LRRC63Q05C16 580 aa19.97■□□□□ 0.79
SSH3-209ENST00000532600 C2orf27AQ580R0 203 aa19.97■□□□□ 0.79
SSH3-209ENST00000532600 TCERG1LQ5VWI1 586 aa19.97■□□□□ 0.79
SSH3-209ENST00000532600 KBTBD6Q86V97 674 aa19.97■□□□□ 0.79
SSH3-209ENST00000532600 GPR161Q8N6U8 529 aaKnown RBP19.97■□□□□ 0.79
SSH3-209ENST00000532600 UBR7Q8N806 425 aa19.97■□□□□ 0.79
SSH3-209ENST00000532600 CCDC150Q8NCX0 1101 aa19.97■□□□□ 0.79
SSH3-209ENST00000532600 EXOC4Q96A65 974 aa19.97■□□□□ 0.79
SSH3-209ENST00000532600 P2RY11Q96G91 374 aa19.97■□□□□ 0.79
SSH3-209ENST00000532600 TMEM176AQ96HP8 235 aa19.97■□□□□ 0.79
SSH3-209ENST00000532600 HEXIM2Q96MH2 286 aaKnown RBP19.97■□□□□ 0.79
SSH3-209ENST00000532600 TSG101Q99816 390 aa19.97■□□□□ 0.79
SSH3-209ENST00000532600 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.97■□□□□ 0.79
SSH3-209ENST00000532600 USP18Q9UMW8 372 aa19.97■□□□□ 0.79
SSH3-209ENST00000532600 RPP40O75818 363 aaKnown RBP19.96■□□□□ 0.79
SSH3-209ENST00000532600 KAT7O95251 611 aa19.96■□□□□ 0.79
SSH3-209ENST00000532600 ADH1CP00326 375 aa19.96■□□□□ 0.79
SSH3-209ENST00000532600 EIF2DP41214 584 aaKnown RBP19.96■□□□□ 0.79
SSH3-209ENST00000532600 KDSRQ06136 332 aa19.96■□□□□ 0.79
SSH3-209ENST00000532600 CCDC183Q5T5S1 534 aa19.96■□□□□ 0.79
SSH3-209ENST00000532600 EMC10Q5UCC4 262 aa19.96■□□□□ 0.79
SSH3-209ENST00000532600 ARHGAP17Q68EM7 881 aa19.96■□□□□ 0.79
SSH3-209ENST00000532600 HTR3DQ70Z44 454 aa19.96■□□□□ 0.79
SSH3-209ENST00000532600 CEP68Q76N32 757 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms